RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 EAF2Q96CJ1 260 aaPredicted RBP19■□□□□ 0.63
SYNM-201ENST00000328642 ZNF219Q9P2Y4 722 aaPredicted RBP19■□□□□ 0.63
SYNM-201ENST00000328642 CLTCQ00610 1675 aaKnown RBP19■□□□□ 0.63
SYNM-201ENST00000328642 ANKRD18BA2A2Z9 1011 aa19■□□□□ 0.63
SYNM-201ENST00000328642 PRKCSHP14314 528 aaPredicted RBP19■□□□□ 0.63
SYNM-201ENST00000328642 SASS6Q6UVJ0 657 aa19■□□□□ 0.63
SYNM-201ENST00000328642 IGHMBP2P38935 993 aaKnown RBP19■□□□□ 0.63
SYNM-201ENST00000328642 DDX24Q9GZR7 859 aaKnown RBP eCLIP19■□□□□ 0.63
SYNM-201ENST00000328642 CKAP2LQ8IYA6 745 aa19■□□□□ 0.63
SYNM-201ENST00000328642 ASAP1Q9ULH1 1129 aa19■□□□□ 0.63
SYNM-201ENST00000328642 MBD3O95983 291 aa18.99■□□□□ 0.63
SYNM-201ENST00000328642 PDCP20941 246 aa18.99■□□□□ 0.63
SYNM-201ENST00000328642 VPS53Q5VIR6 699 aa18.99■□□□□ 0.63
SYNM-201ENST00000328642 ZNF592Q92610 1267 aa18.99■□□□□ 0.63
SYNM-201ENST00000328642 TLR7Q9NYK1 1049 aaKnown RBP18.99■□□□□ 0.63
SYNM-201ENST00000328642 RBM25P49756 843 aaKnown RBP18.99■□□□□ 0.63
SYNM-201ENST00000328642 SEC62Q99442 399 aaKnown RBP18.99■□□□□ 0.63
SYNM-201ENST00000328642 METTL22Q9BUU2 404 aaPredicted RBP18.99■□□□□ 0.63
SYNM-201ENST00000328642 PIK3C2BO00750 1634 aa18.98■□□□□ 0.63
SYNM-201ENST00000328642 KRT85P78386 507 aa18.98■□□□□ 0.63
SYNM-201ENST00000328642 SPATA32Q96LK8 384 aa18.98■□□□□ 0.63
SYNM-201ENST00000328642 LMTK2Q8IWU2 1503 aa18.98■□□□□ 0.63
SYNM-201ENST00000328642 ERBB3P21860 1342 aa18.98■□□□□ 0.63
SYNM-201ENST00000328642 FRMPD1Q5SYB0 1578 aa18.98■□□□□ 0.63
SYNM-201ENST00000328642 DZIP3Q86Y13 1208 aaKnown RBP18.98■□□□□ 0.63
SYNM-201ENST00000328642 PNPLA6Q8IY17 1366 aa18.97■□□□□ 0.63
SYNM-201ENST00000328642 GOLGA6L6A8MZA4 724 aa18.97■□□□□ 0.63
SYNM-201ENST00000328642 CNPY2Q9Y2B0 182 aa18.97■□□□□ 0.63
SYNM-201ENST00000328642 STK38Q15208 465 aa18.97■□□□□ 0.63
SYNM-201ENST00000328642 TSPY26PQ9H489 355 aa18.97■□□□□ 0.63
SYNM-201ENST00000328642 ADGRB1O14514 1584 aa18.97■□□□□ 0.63
SYNM-201ENST00000328642 NIP7Q9Y221 180 aaKnown RBP eCLIP18.97■□□□□ 0.63
SYNM-201ENST00000328642 MROH2AA6NES4 1674 aa18.97■□□□□ 0.63
SYNM-201ENST00000328642 STX6O43752 255 aa18.96■□□□□ 0.63
SYNM-201ENST00000328642 NOL10Q9BSC4 688 aaKnown RBP18.96■□□□□ 0.63
SYNM-201ENST00000328642 LRRC7Q96NW7 1537 aa18.96■□□□□ 0.63
SYNM-201ENST00000328642 NEURL1BA8MQ27 555 aa18.96■□□□□ 0.63
SYNM-201ENST00000328642 PPP1R1BQ9UD71 204 aaPredicted RBP18.96■□□□□ 0.63
SYNM-201ENST00000328642 NPHP4O75161 1426 aaPredicted RBP18.96■□□□□ 0.63
SYNM-201ENST00000328642 XRCC6P12956 609 aaKnown RBP eCLIP18.96■□□□□ 0.63
SYNM-201ENST00000328642 RXRAP19793 462 aa18.96■□□□□ 0.63
SYNM-201ENST00000328642 ATP2B3Q16720 1220 aa18.96■□□□□ 0.63
SYNM-201ENST00000328642 ATP2B2Q01814 1243 aa18.95■□□□□ 0.62
SYNM-201ENST00000328642 IMMTQ16891 758 aaKnown RBP18.95■□□□□ 0.62
SYNM-201ENST00000328642 NEK1Q96PY6 1258 aa18.95■□□□□ 0.62
SYNM-201ENST00000328642 SSH3Q8TE77 659 aa18.95■□□□□ 0.62
SYNM-201ENST00000328642 SNX21Q969T3 373 aa18.95■□□□□ 0.62
SYNM-201ENST00000328642 POLR3DP05423 398 aaPredicted RBP18.95■□□□□ 0.62
SYNM-201ENST00000328642 AKAP2Q9Y2D5 859 aa18.95■□□□□ 0.62
SYNM-201ENST00000328642 CYP27B1O15528 508 aa18.94■□□□□ 0.62
SYNM-201ENST00000328642 MARCH6O60337 910 aa18.94■□□□□ 0.62
SYNM-201ENST00000328642 ANKRD1Q15327 319 aa18.94■□□□□ 0.62
SYNM-201ENST00000328642 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
SYNM-201ENST00000328642 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
SYNM-201ENST00000328642 IRS4O14654 1257 aaPredicted RBP18.94■□□□□ 0.62
SYNM-201ENST00000328642 TAF5LO75529 589 aa18.94■□□□□ 0.62
SYNM-201ENST00000328642 FAM43AQ8N2R8 423 aa18.94■□□□□ 0.62
SYNM-201ENST00000328642 CDK12Q9NYV4 1490 aaPredicted RBP18.94■□□□□ 0.62
SYNM-201ENST00000328642 ZPR1O75312 459 aa18.94■□□□□ 0.62
SYNM-201ENST00000328642 PTH1RQ03431 593 aa18.94■□□□□ 0.62
SYNM-201ENST00000328642 FAM98CQ17RN3 349 aaKnown RBP18.94■□□□□ 0.62
SYNM-201ENST00000328642 MICU3Q86XE3 530 aa18.94■□□□□ 0.62
SYNM-201ENST00000328642 TRIM5Q9C035 493 aa18.94■□□□□ 0.62
SYNM-201ENST00000328642 CREB3L3Q68CJ9 461 aa18.93■□□□□ 0.62
SYNM-201ENST00000328642 A0A1B0GUL7 405 aa18.93■□□□□ 0.62
SYNM-201ENST00000328642 NRDCO43847 1150 aa18.93■□□□□ 0.62
SYNM-201ENST00000328642 DNM1Q05193 864 aaKnown RBP18.93■□□□□ 0.62
SYNM-201ENST00000328642 SLC9C2Q5TAH2 1124 aa18.93■□□□□ 0.62
SYNM-201ENST00000328642 NAPBQ9H115 298 aa18.93■□□□□ 0.62
SYNM-201ENST00000328642 ZNF213O14771 459 aa18.93■□□□□ 0.62
SYNM-201ENST00000328642 SLFNL1Q499Z3 407 aa18.93■□□□□ 0.62
SYNM-201ENST00000328642 CPSF1Q10570 1443 aaKnown RBP18.93■□□□□ 0.62
SYNM-201ENST00000328642 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
SYNM-201ENST00000328642 ZSCAN31Q96LW9 406 aaPredicted RBP18.92■□□□□ 0.62
SYNM-201ENST00000328642 TNMDQ9H2S6 317 aa18.92■□□□□ 0.62
SYNM-201ENST00000328642 PAG1Q9NWQ8 432 aa18.92■□□□□ 0.62
SYNM-201ENST00000328642 R3HCC1Q9Y3T6 440 aaKnown RBP18.92■□□□□ 0.62
SYNM-201ENST00000328642 LRRC24Q50LG9 513 aa18.92■□□□□ 0.62
SYNM-201ENST00000328642 PCDH11XQ9BZA7 1347 aa18.92■□□□□ 0.62
SYNM-201ENST00000328642 PCDH11YQ9BZA8 1340 aa18.92■□□□□ 0.62
SYNM-201ENST00000328642 KINO60870 393 aaKnown RBP18.92■□□□□ 0.62
SYNM-201ENST00000328642 SAFBQ15424 915 aaKnown RBP eCLIP18.92■□□□□ 0.62
SYNM-201ENST00000328642 GIMAP6Q6P9H5 292 aa18.92■□□□□ 0.62
SYNM-201ENST00000328642 MIGA1Q8NAN2 632 aa18.92■□□□□ 0.62
SYNM-201ENST00000328642 PUS3Q9BZE2 481 aaKnown RBP18.92■□□□□ 0.62
SYNM-201ENST00000328642 Q6ZUG5 572 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 SGSM2O43147 1006 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 KRT32Q14532 448 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 TNNI3KQ59H18 835 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 PLBD2Q8NHP8 589 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 ANKIB1Q9P2G1 1089 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 FPGT-TNNI3KV9GXZ4 949 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 RAB3GAP1Q15042 981 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 ISM2Q6H9L7 571 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 RASEFQ8IZ41 740 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 SNX14Q9Y5W7 946 aa18.91■□□□□ 0.62
SYNM-201ENST00000328642 LMTK3Q96Q04 1460 aa18.9■□□□□ 0.62
SYNM-201ENST00000328642 GOLGA8BA8MQT2 603 aa18.9■□□□□ 0.62
SYNM-201ENST00000328642 IQGAP1P46940 1657 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms