RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 BLMP54132 1417 aaPredicted RBP13.33□□□□□ -0.28
COL4A5-201ENST00000328300 SYCP1Q15431 976 aa13.33□□□□□ -0.28
COL4A5-201ENST00000328300 CUL5Q93034 780 aa13.33□□□□□ -0.28
COL4A5-201ENST00000328300 SSRP1Q08945 709 aaKnown RBP13.33□□□□□ -0.28
COL4A5-201ENST00000328300 ATP2B3Q16720 1220 aa13.33□□□□□ -0.28
COL4A5-201ENST00000328300 TPTE2Q6XPS3 522 aa13.33□□□□□ -0.28
COL4A5-201ENST00000328300 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
COL4A5-201ENST00000328300 DNAI2Q9GZS0 605 aa13.33□□□□□ -0.28
COL4A5-201ENST00000328300 MCM4P33991 863 aa13.32□□□□□ -0.28
COL4A5-201ENST00000328300 ZNF76P36508 570 aa13.32□□□□□ -0.28
COL4A5-201ENST00000328300 UGGT1Q9NYU2 1555 aa13.32□□□□□ -0.28
COL4A5-201ENST00000328300 C8orf76Q96K31 380 aa13.32□□□□□ -0.28
COL4A5-201ENST00000328300 AOX1Q06278 1338 aa13.32□□□□□ -0.28
COL4A5-201ENST00000328300 NPHP4O75161 1426 aaPredicted RBP13.32□□□□□ -0.28
COL4A5-201ENST00000328300 ZNF804AQ7Z570 1209 aa13.32□□□□□ -0.28
COL4A5-201ENST00000328300 RBM27Q9P2N5 1060 aaKnown RBP13.32□□□□□ -0.28
COL4A5-201ENST00000328300 BMP15O95972 392 aa13.32□□□□□ -0.28
COL4A5-201ENST00000328300 PLCG2P16885 1265 aa13.32□□□□□ -0.28
COL4A5-201ENST00000328300 PPFIBP1Q86W92 1011 aa13.32□□□□□ -0.28
COL4A5-201ENST00000328300 TEX35Q5T0J7 233 aa13.32□□□□□ -0.28
COL4A5-201ENST00000328300 BCL11BQ9C0K0 894 aaPredicted RBP13.32□□□□□ -0.28
COL4A5-201ENST00000328300 TMEM266Q2M3C6 531 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 DCTPP1Q9H773 170 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 DZIP3Q86Y13 1208 aaKnown RBP13.31□□□□□ -0.28
COL4A5-201ENST00000328300 CERS3Q8IU89 383 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 RTCBQ9Y3I0 505 aaKnown RBP13.31□□□□□ -0.28
COL4A5-201ENST00000328300 GOLGA8AA7E2F4 631 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 GOLGA8BA8MQT2 603 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 MINDY4BA8MYZ0 360 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 ATP5J2-PTCD1G3V325 749 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 C6orf229H3BNL8 230 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 TMEM132AQ24JP5 1023 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 TBC1D9Q6ZT07 1266 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 PDILTQ8N807 584 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 GOLIM4O00461 696 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 NAP1L1P55209 391 aaKnown RBP13.31□□□□□ -0.28
COL4A5-201ENST00000328300 MTERF4Q7Z6M4 381 aaKnown RBP13.31□□□□□ -0.28
COL4A5-201ENST00000328300 CABP5Q9NP86 173 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 HDAC9Q9UKV0 1011 aa13.31□□□□□ -0.28
COL4A5-201ENST00000328300 CAVIN2O95810 425 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 PLBD2Q8NHP8 589 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 IFIT3O14879 490 aaKnown RBP13.3□□□□□ -0.28
COL4A5-201ENST00000328300 MYO1BO43795 1136 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 GNAQP50148 359 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 MAP3K11Q16584 847 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 MFSD6Q6ZSS7 791 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 LRRC27Q9C0I9 530 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 SERPINC1P01008 464 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 NEK1Q96PY6 1258 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 IQGAP3Q86VI3 1631 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 PDE1AP54750 535 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 EYA3Q99504 573 aa13.3□□□□□ -0.28
COL4A5-201ENST00000328300 FGFR1OPO95684 399 aaKnown RBP13.29□□□□□ -0.28
COL4A5-201ENST00000328300 MEIS3Q99687 375 aa13.29□□□□□ -0.28
COL4A5-201ENST00000328300 ABCC3O15438 1527 aa13.29□□□□□ -0.28
COL4A5-201ENST00000328300 CHL1O00533 1208 aa13.29□□□□□ -0.28
COL4A5-201ENST00000328300 MPHOSPH10O00566 681 aaKnown RBP13.29□□□□□ -0.28
COL4A5-201ENST00000328300 PPP1R12BO60237 982 aaPredicted RBP13.29□□□□□ -0.28
COL4A5-201ENST00000328300 MCM5P33992 734 aa13.29□□□□□ -0.28
COL4A5-201ENST00000328300 CCDC83Q8IWF9 413 aa13.29□□□□□ -0.28
COL4A5-201ENST00000328300 ZRANB1Q9UGI0 708 aa13.29□□□□□ -0.28
COL4A5-201ENST00000328300 ERVV-2B6SEH9 535 aa13.29□□□□□ -0.28
COL4A5-201ENST00000328300 ZSCAN16Q9H4T2 348 aaPredicted RBP13.29□□□□□ -0.28
COL4A5-201ENST00000328300 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
COL4A5-201ENST00000328300 KIF1BO60333 1816 aa13.29□□□□□ -0.28
COL4A5-201ENST00000328300 NFATC2IPQ8NCF5 419 aa13.28□□□□□ -0.28
COL4A5-201ENST00000328300 C8orf37Q96NL8 207 aa13.28□□□□□ -0.28
COL4A5-201ENST00000328300 LMBR1LQ6UX01 489 aa13.28□□□□□ -0.28
COL4A5-201ENST00000328300 DDX19AQ9NUU7 478 aaKnown RBP13.28□□□□□ -0.28
COL4A5-201ENST00000328300 NIP7Q9Y221 180 aaKnown RBP eCLIP13.28□□□□□ -0.28
COL4A5-201ENST00000328300 RANBP6O60518 1105 aaKnown RBP13.28□□□□□ -0.28
COL4A5-201ENST00000328300 MCMDC2Q4G0Z9 681 aa13.28□□□□□ -0.28
COL4A5-201ENST00000328300 NBPF14Q5TI25 921 aa13.28□□□□□ -0.28
COL4A5-201ENST00000328300 CALM1P0DP23 149 aa13.28□□□□□ -0.28
COL4A5-201ENST00000328300 CALM2P0DP24 149 aa13.28□□□□□ -0.28
COL4A5-201ENST00000328300 CALM3P0DP25 149 aa13.28□□□□□ -0.28
COL4A5-201ENST00000328300 MPHOSPH6Q99547 160 aaKnown RBP13.28□□□□□ -0.28
COL4A5-201ENST00000328300 BAG4O95429 457 aaKnown RBP13.28□□□□□ -0.28
COL4A5-201ENST00000328300 TRIM21P19474 475 aaKnown RBP13.28□□□□□ -0.28
COL4A5-201ENST00000328300 CEBPZQ03701 1054 aaKnown RBP13.28□□□□□ -0.28
COL4A5-201ENST00000328300 CCDC191Q8NCU4 936 aa13.28□□□□□ -0.28
COL4A5-201ENST00000328300 TBC1D32Q96NH3 1257 aa13.28□□□□□ -0.28
COL4A5-201ENST00000328300 ANO10Q9NW15 660 aa13.28□□□□□ -0.28
COL4A5-201ENST00000328300 CCDC194A0A1B0GVG4 234 aa13.27□□□□□ -0.28
COL4A5-201ENST00000328300 KANK3Q6NY19 840 aa13.27□□□□□ -0.28
COL4A5-201ENST00000328300 MAP7D2Q96T17 732 aa13.27□□□□□ -0.28
COL4A5-201ENST00000328300 RUFY1Q96T51 708 aa13.27□□□□□ -0.28
COL4A5-201ENST00000328300 KAT14Q9H8E8 782 aa13.27□□□□□ -0.28
COL4A5-201ENST00000328300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.286e-7■■■■□ 19.9
COL4A5-201ENST00000328300 ANKARQ7Z5J8 1434 aa13.27□□□□□ -0.28
COL4A5-201ENST00000328300 HSPA2P54652 639 aa13.27□□□□□ -0.28
COL4A5-201ENST00000328300 CCDC183Q5T5S1 534 aa13.27□□□□□ -0.28
COL4A5-201ENST00000328300 UPF3BQ9BZI7 483 aaKnown RBP13.27□□□□□ -0.28
COL4A5-201ENST00000328300 SLC52A2Q9HAB3 445 aa13.27□□□□□ -0.28
COL4A5-201ENST00000328300 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.28
COL4A5-201ENST00000328300 SLAIN2Q9P270 581 aa13.27□□□□□ -0.28
COL4A5-201ENST00000328300 ZNF790Q6PG37 636 aa13.27□□□□□ -0.29
COL4A5-201ENST00000328300 ESR2Q92731 530 aa13.27□□□□□ -0.29
COL4A5-201ENST00000328300 IARSP41252 1262 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms