RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 COL16A1Q07092 1604 aaPredicted RBP11.68□□□□□ -0.54
SP1-201ENST00000327443 MUM1L1Q5H9M0 696 aa11.68□□□□□ -0.54
SP1-201ENST00000327443 EYA1Q99502 592 aa11.68□□□□□ -0.54
SP1-201ENST00000327443 SYCE3A1L190 88 aa11.68□□□□□ -0.54
SP1-201ENST00000327443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.543e-7■□□□□ 8.7
SP1-201ENST00000327443 N4BP2Q86UW6 1770 aaPredicted RBP11.67□□□□□ -0.54
SP1-201ENST00000327443 CACNA1FO60840 1977 aa11.67□□□□□ -0.54
SP1-201ENST00000327443 SULT6B1Q6IMI4 303 aa11.67□□□□□ -0.54
SP1-201ENST00000327443 MAP2K2P36507 400 aa11.67□□□□□ -0.54
SP1-201ENST00000327443 RBM5P52756 815 aaKnown RBP eCLIP11.67□□□□□ -0.54
SP1-201ENST00000327443 AMOTQ4VCS5 1084 aa11.67□□□□□ -0.54
SP1-201ENST00000327443 PHACTR3Q96KR7 559 aa11.67□□□□□ -0.54
SP1-201ENST00000327443 RAD50Q92878 1312 aa11.67□□□□□ -0.54
SP1-201ENST00000327443 MRC1P22897 1456 aa11.66□□□□□ -0.54
SP1-201ENST00000327443 WNK3Q9BYP7 1800 aa11.66□□□□□ -0.54
SP1-201ENST00000327443 RBM6P78332 1123 aaKnown RBP11.66□□□□□ -0.54
SP1-201ENST00000327443 KMT5BQ4FZB7 885 aa11.66□□□□□ -0.54
SP1-201ENST00000327443 ZC3H12AQ5D1E8 599 aaKnown RBP11.66□□□□□ -0.54
SP1-201ENST00000327443 LRSAM1Q6UWE0 723 aa11.66□□□□□ -0.54
SP1-201ENST00000327443 CEMIPQ8WUJ3 1361 aa11.66□□□□□ -0.54
SP1-201ENST00000327443 MAP3K5Q99683 1374 aa11.66□□□□□ -0.54
SP1-201ENST00000327443 IPO8O15397 1037 aaKnown RBP11.66□□□□□ -0.54
SP1-201ENST00000327443 BMS1Q14692 1282 aaKnown RBP11.66□□□□□ -0.54
SP1-201ENST00000327443 ITFG2Q969R8 447 aa11.66□□□□□ -0.54
SP1-201ENST00000327443 RBM33Q96EV2 1170 aaKnown RBP11.66□□□□□ -0.54
SP1-201ENST00000327443 FBLN1P23142 703 aa11.65□□□□□ -0.54
SP1-201ENST00000327443 MAP9Q49MG5 647 aa11.65□□□□□ -0.54
SP1-201ENST00000327443 ANKRD20A12PQ8NF67 263 aa11.65□□□□□ -0.54
SP1-201ENST00000327443 FAM53CQ9NYF3 392 aa11.65□□□□□ -0.54
SP1-201ENST00000327443 NWD2Q9ULI1 1742 aa11.65□□□□□ -0.54
SP1-201ENST00000327443 PHLPP1O60346 1717 aa11.65□□□□□ -0.54
SP1-201ENST00000327443 SYCP1Q15431 976 aa11.65□□□□□ -0.54
SP1-201ENST00000327443 SCN11AQ9UI33 1791 aa11.65□□□□□ -0.54
SP1-201ENST00000327443 H0YHG0 523 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 SARNPP82979 210 aaKnown RBP11.64□□□□□ -0.55
SP1-201ENST00000327443 SRLQ86TD4 932 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 JMYQ8N9B5 988 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 GTF3C6Q969F1 213 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 CWC22Q9HCG8 908 aaKnown RBP11.64□□□□□ -0.55
SP1-201ENST00000327443 RRP15Q9Y3B9 282 aaKnown RBP11.64□□□□□ -0.55
SP1-201ENST00000327443 ERBB3P21860 1342 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 KLHL33A6NCF5 533 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 TTC19Q6DKK2 380 aaPredicted RBP11.64□□□□□ -0.55
SP1-201ENST00000327443 BCL2L13Q9BXK5 485 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 BSDC1Q9NW68 430 aaPredicted RBP11.64□□□□□ -0.55
SP1-201ENST00000327443 CHL1O00533 1208 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 HMOX1P09601 288 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 CALRP27797 417 aaKnown RBP11.64□□□□□ -0.55
SP1-201ENST00000327443 RARSP54136 660 aaKnown RBP11.64□□□□□ -0.55
SP1-201ENST00000327443 ZSCAN26Q16670 478 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 TXLNBQ8N3L3 684 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 PRPF38AQ8NAV1 312 aaKnown RBP11.64□□□□□ -0.55
SP1-201ENST00000327443 ZNF397Q8NF99 534 aaPredicted RBP11.64□□□□□ -0.55
SP1-201ENST00000327443 LMBRD1Q9NUN5 540 aa11.64□□□□□ -0.55
SP1-201ENST00000327443 LRRFIP2Q9Y608 721 aaKnown RBP11.64□□□□□ -0.55
SP1-201ENST00000327443 KIF1BPQ96EK5 621 aa11.63□□□□□ -0.55
SP1-201ENST00000327443 ARHGAP45Q92619 1136 aa11.63□□□□□ -0.55
SP1-201ENST00000327443 COL5A2P05997 1499 aaPredicted RBP11.62□□□□□ -0.55
SP1-201ENST00000327443 INHBEP58166 350 aa11.62□□□□□ -0.55
SP1-201ENST00000327443 DNAJC14Q6Y2X3 702 aaPredicted RBP11.62□□□□□ -0.55
SP1-201ENST00000327443 TMEM63CQ9P1W3 806 aa11.62□□□□□ -0.55
SP1-201ENST00000327443 NRAPQ86VF7 1730 aa11.62□□□□□ -0.55
SP1-201ENST00000327443 LRP6O75581 1613 aa11.62□□□□□ -0.55
SP1-201ENST00000327443 MCTP2Q6DN12 878 aa11.62□□□□□ -0.55
SP1-201ENST00000327443 ANKRD24Q8TF21 1146 aa11.62□□□□□ -0.55
SP1-201ENST00000327443 PYCARDQ9ULZ3 195 aa11.62□□□□□ -0.55
SP1-201ENST00000327443 RPS6KL1Q9Y6S9 549 aa11.62□□□□□ -0.55
SP1-201ENST00000327443 PRPF40AO75400 957 aaKnown RBP11.61□□□□□ -0.55
SP1-201ENST00000327443 C11orf91Q3C1V1 193 aa11.61□□□□□ -0.55
SP1-201ENST00000327443 SWT1Q5T5J6 900 aaKnown RBP11.61□□□□□ -0.55
SP1-201ENST00000327443 KIAA1524Q8TCG1 905 aa11.61□□□□□ -0.55
SP1-201ENST00000327443 GPT2Q8TD30 523 aa11.61□□□□□ -0.55
SP1-201ENST00000327443 PANK1Q8TE04 598 aa11.61□□□□□ -0.55
SP1-201ENST00000327443 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.61□□□□□ -0.55
SP1-201ENST00000327443 TNNQ9UQP3 1299 aa11.61□□□□□ -0.55
SP1-201ENST00000327443 V9GYY5 206 aaPredicted RBP11.61□□□□□ -0.55
SP1-201ENST00000327443 GNAT3A8MTJ3 354 aa11.61□□□□□ -0.55
SP1-201ENST00000327443 POLR3GO15318 223 aaPredicted RBP11.61□□□□□ -0.55
SP1-201ENST00000327443 MAFGO15525 162 aa11.61□□□□□ -0.55
SP1-201ENST00000327443 SCP2P22307 547 aa11.61□□□□□ -0.55
SP1-201ENST00000327443 CCT2P78371 535 aaKnown RBP11.61□□□□□ -0.55
SP1-201ENST00000327443 PLEKHO1Q53GL0 409 aaPredicted RBP11.61□□□□□ -0.55
SP1-201ENST00000327443 FAM184AQ8NB25 1140 aa11.61□□□□□ -0.55
SP1-201ENST00000327443 USP25Q9UHP3 1055 aa11.61□□□□□ -0.55
SP1-201ENST00000327443 MTHFSDQ2M296 383 aaKnown RBP11.6□□□□□ -0.55
SP1-201ENST00000327443 NOM1Q5C9Z4 860 aaKnown RBP11.6□□□□□ -0.55
SP1-201ENST00000327443 CASC1Q6TDU7 716 aa11.6□□□□□ -0.55
SP1-201ENST00000327443 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
SP1-201ENST00000327443 LRRC59Q96AG4 307 aaKnown RBP11.6□□□□□ -0.55
SP1-201ENST00000327443 COG6Q9Y2V7 657 aa11.6□□□□□ -0.55
SP1-201ENST00000327443 PAPPAQ13219 1627 aa11.6□□□□□ -0.55
SP1-201ENST00000327443 HOXB7P09629 217 aa11.6□□□□□ -0.55
SP1-201ENST00000327443 AKAP4Q5JQC9 854 aa11.6□□□□□ -0.55
SP1-201ENST00000327443 FBXO38Q6PIJ6 1188 aa11.6□□□□□ -0.55
SP1-201ENST00000327443 CLEC17AQ6ZS10 378 aa11.6□□□□□ -0.55
SP1-201ENST00000327443 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
SP1-201ENST00000327443 CWC15Q9P013 229 aaKnown RBP11.6□□□□□ -0.55
SP1-201ENST00000327443 SHANK3Q9BYB0 1731 aa11.6□□□□□ -0.55
SP1-201ENST00000327443 CAND2O75155 1236 aa11.59□□□□□ -0.55
SP1-201ENST00000327443 ST5P78524 1137 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms