RNA–Protein interactions for RNA: ENST00000327351.6

CCDC107-201, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-201ENST00000327351 LINS1Q8NG48 757 aa21.46■■□□□ 1.03
CCDC107-201ENST00000327351 USP44Q9H0E7 712 aa21.46■■□□□ 1.03
CCDC107-201ENST00000327351 MYD88Q99836 296 aa21.44■■□□□ 1.02
CCDC107-201ENST00000327351 IBTKQ9P2D0 1353 aaPredicted RBP21.44■■□□□ 1.02
CCDC107-201ENST00000327351 GNAI2P04899 355 aa21.43■■□□□ 1.02
CCDC107-201ENST00000327351 IGKV5-2P06315 115 aa21.43■■□□□ 1.02
CCDC107-201ENST00000327351 TM4SF1P30408 202 aa21.43■■□□□ 1.02
CCDC107-201ENST00000327351 NEXNQ0ZGT2 675 aa21.43■■□□□ 1.02
CCDC107-201ENST00000327351 BCL2L12Q9HB09 334 aa21.43■■□□□ 1.02
CCDC107-201ENST00000327351 ZNF652Q9Y2D9 606 aa21.43■■□□□ 1.02
CCDC107-201ENST00000327351 CAMTA2O94983 1202 aa21.42■■□□□ 1.02
CCDC107-201ENST00000327351 CWF19L2Q2TBE0 894 aaKnown RBP21.42■■□□□ 1.02
CCDC107-201ENST00000327351 SIRT2Q8IXJ6 389 aa21.42■■□□□ 1.02
CCDC107-201ENST00000327351 RPAP2Q8IXW5 612 aaPredicted RBP21.42■■□□□ 1.02
CCDC107-201ENST00000327351 NLGN2Q8NFZ4 835 aa21.42■■□□□ 1.02
CCDC107-201ENST00000327351 DDR1Q08345 913 aa21.41■■□□□ 1.02
CCDC107-201ENST00000327351 NFIXQ14938 502 aa21.41■■□□□ 1.02
CCDC107-201ENST00000327351 KIF6Q6ZMV9 814 aa21.41■■□□□ 1.02
CCDC107-201ENST00000327351 BICDL1Q6ZP65 573 aa21.41■■□□□ 1.02
CCDC107-201ENST00000327351 ANKRD44Q8N8A2 993 aa21.41■■□□□ 1.02
CCDC107-201ENST00000327351 ARFGEF2Q9Y6D5 1785 aa21.41■■□□□ 1.02
CCDC107-201ENST00000327351 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
CCDC107-201ENST00000327351 NEURL1BA8MQ27 555 aa21.4■■□□□ 1.02
CCDC107-201ENST00000327351 POLRMTO00411 1230 aaKnown RBP21.4■■□□□ 1.02
CCDC107-201ENST00000327351 UBTFL1P0CB47 393 aaPredicted RBP21.4■■□□□ 1.02
CCDC107-201ENST00000327351 CEP85Q6P2H3 762 aa21.4■■□□□ 1.02
CCDC107-201ENST00000327351 CLEC4GQ6UXB4 293 aa21.4■■□□□ 1.02
CCDC107-201ENST00000327351 ZBTB3Q9H5J0 574 aa21.4■■□□□ 1.02
CCDC107-201ENST00000327351 RGL2O15211 777 aa21.39■■□□□ 1.01
CCDC107-201ENST00000327351 UTYO14607 1347 aa21.38■■□□□ 1.01
CCDC107-201ENST00000327351 MAP3K15Q6ZN16 1313 aa21.38■■□□□ 1.01
CCDC107-201ENST00000327351 SERPINB2P05120 415 aa21.38■■□□□ 1.01
CCDC107-201ENST00000327351 NBPF7P0C2Y1 421 aaPredicted RBP21.38■■□□□ 1.01
CCDC107-201ENST00000327351 GCKRQ14397 625 aa21.38■■□□□ 1.01
CCDC107-201ENST00000327351 TBC1D9BQ66K14 1250 aa21.38■■□□□ 1.01
CCDC107-201ENST00000327351 PELP1Q8IZL8 1130 aaKnown RBP21.38■■□□□ 1.01
CCDC107-201ENST00000327351 SETDB2Q96T68 719 aa21.38■■□□□ 1.01
CCDC107-201ENST00000327351 C9orf78Q9NZ63 289 aaPredicted RBP21.38■■□□□ 1.01
CCDC107-201ENST00000327351 LRRFIP2Q9Y608 721 aaKnown RBP21.38■■□□□ 1.01
CCDC107-201ENST00000327351 C10orf71Q711Q0 1435 aa21.38■■□□□ 1.01
CCDC107-201ENST00000327351 ATP5J2-PTCD1G3V325 749 aa21.37■■□□□ 1.01
CCDC107-201ENST00000327351 GRM8O00222 908 aa21.37■■□□□ 1.01
CCDC107-201ENST00000327351 TGFB2P61812 414 aa21.37■■□□□ 1.01
CCDC107-201ENST00000327351 GPR162Q16538 588 aa21.37■■□□□ 1.01
CCDC107-201ENST00000327351 CARMIL3Q8ND23 1372 aa21.36■■□□□ 1.01
CCDC107-201ENST00000327351 ERVV-1B6SEH8 477 aa21.36■■□□□ 1.01
CCDC107-201ENST00000327351 NPHP1O15259 732 aa21.36■■□□□ 1.01
CCDC107-201ENST00000327351 ATP8B2P98198 1209 aa21.36■■□□□ 1.01
CCDC107-201ENST00000327351 TCIRG1Q13488 830 aa21.36■■□□□ 1.01
CCDC107-201ENST00000327351 SMC5Q8IY18 1101 aa21.36■■□□□ 1.01
CCDC107-201ENST00000327351 ISCA1Q9BUE6 129 aa21.36■■□□□ 1.01
CCDC107-201ENST00000327351 HDAC5Q9UQL6 1122 aa21.36■■□□□ 1.01
CCDC107-201ENST00000327351 BCORQ6W2J9 1755 aa21.36■■□□□ 1.01
CCDC107-201ENST00000327351 TRIM28Q13263 835 aaKnown RBP21.34■■□□□ 1.01
CCDC107-201ENST00000327351 GIGYF2Q6Y7W6 1299 aaKnown RBP21.34■■□□□ 1.01
CCDC107-201ENST00000327351 HLFQ16534 295 aa21.33■■□□□ 1.01
CCDC107-201ENST00000327351 CCDC191Q8NCU4 936 aa21.33■■□□□ 1.01
CCDC107-201ENST00000327351 CWC25Q9NXE8 425 aaPredicted RBP21.33■■□□□ 1.01
CCDC107-201ENST00000327351 HMMRO75330 724 aa21.32■■□□□ 1
CCDC107-201ENST00000327351 HSP90AB3PQ58FF7 597 aa21.32■■□□□ 1
CCDC107-201ENST00000327351 GCC1Q96CN9 775 aa21.32■■□□□ 1
CCDC107-201ENST00000327351 DCTPP1Q9H773 170 aa21.32■■□□□ 1
CCDC107-201ENST00000327351 PDZRN3Q9UPQ7 1066 aa21.32■■□□□ 1
CCDC107-201ENST00000327351 NIP7Q9Y221 180 aaKnown RBP eCLIP21.32■■□□□ 1
CCDC107-201ENST00000327351 AFDNP55196 1824 aaKnown RBP21.32■■□□□ 1
CCDC107-201ENST00000327351 KIF13BQ9NQT8 1826 aa21.32■■□□□ 1
CCDC107-201ENST00000327351 H7C1W4 665 aa21.31■■□□□ 1
CCDC107-201ENST00000327351 CNBD1Q8NA66 436 aa21.31■■□□□ 1
CCDC107-201ENST00000327351 SUCLG2Q96I99 432 aa21.31■■□□□ 1
CCDC107-201ENST00000327351 A0A0G2JLW4 131 aa21.3■■□□□ 1
CCDC107-201ENST00000327351 CASP7P55210 303 aa21.3■■□□□ 1
CCDC107-201ENST00000327351 ST5P78524 1137 aa21.3■■□□□ 1
CCDC107-201ENST00000327351 SKAP1Q86WV1 359 aa21.3■■□□□ 1
CCDC107-201ENST00000327351 NBPF5PQ86XG9 351 aaPredicted RBP21.3■■□□□ 1
CCDC107-201ENST00000327351 KAZALD1Q96I82 304 aa21.3■■□□□ 1
CCDC107-201ENST00000327351 PNMA6EA0A0J9YXQ4 647 aa21.29■■□□□ 1
CCDC107-201ENST00000327351 GRIN3BO60391 1043 aa21.29■■□□□ 1
CCDC107-201ENST00000327351 DPEP1P16444 411 aa21.29■■□□□ 1
CCDC107-201ENST00000327351 NRXN2Q9P2S2 1712 aa21.29■■□□□ 1
CCDC107-201ENST00000327351 MTX1Q13505 466 aa21.28■■□□□ 1
CCDC107-201ENST00000327351 POLA2Q14181 598 aa21.28■■□□□ 1
CCDC107-201ENST00000327351 PRR5LQ6MZQ0 368 aa21.28■■□□□ 1
CCDC107-201ENST00000327351 TPTE2Q6XPS3 522 aa21.28■■□□□ 1
CCDC107-201ENST00000327351 PPP1R42Q7Z4L9 355 aa21.28■■□□□ 1
CCDC107-201ENST00000327351 SSH3Q8TE77 659 aa21.28■■□□□ 1
CCDC107-201ENST00000327351 JARID2Q92833 1246 aaPredicted RBP21.28■■□□□ 1
CCDC107-201ENST00000327351 GTF2E1P29083 439 aaPredicted RBP21.27■■□□□ 1
CCDC107-201ENST00000327351 NUCB1Q02818 461 aa21.27■■□□□ 1
CCDC107-201ENST00000327351 ZNF34Q8IZ26 560 aa21.27■■□□□ 1
CCDC107-201ENST00000327351 NUP98P52948 1817 aa21.27■□□□□ 0.99
CCDC107-201ENST00000327351 FAM177BA6PVY3 158 aa21.26■□□□□ 0.99
CCDC107-201ENST00000327351 PDE6BP35913 854 aa21.26■□□□□ 0.99
CCDC107-201ENST00000327351 UBE3BQ7Z3V4 1068 aa21.26■□□□□ 0.99
CCDC107-201ENST00000327351 NLRP10Q86W26 655 aa21.26■□□□□ 0.99
CCDC107-201ENST00000327351 BRIP1Q9BX63 1249 aa21.26■□□□□ 0.99
CCDC107-201ENST00000327351 NYXQ9GZU5 481 aa21.26■□□□□ 0.99
CCDC107-201ENST00000327351 PIM2Q9P1W9 311 aa21.26■□□□□ 0.99
CCDC107-201ENST00000327351 WWC3Q9ULE0 1092 aa21.26■□□□□ 0.99
CCDC107-201ENST00000327351 H0YIN7 160 aa21.25■□□□□ 0.99
CCDC107-201ENST00000327351 YBX3P16989 372 aaKnown RBP eCLIP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms