RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 SSRP1Q08945 709 aaKnown RBP10.42□□□□□ -0.74
CD28-201ENST00000324106 CETN1Q12798 172 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 HMG20BQ9P0W2 317 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 SLC39A6Q13433 755 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 SUPT20HQ8NEM7 779 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 DIP2BQ9P265 1576 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 KIAA0556O60303 1618 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 NBPF7P0C2Y1 421 aaPredicted RBP10.42□□□□□ -0.74
CD28-201ENST00000324106 NFATC2IPQ8NCF5 419 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 CNNM2Q9H8M5 875 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 TCP11L1Q9NUJ3 509 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 PLEKHH1Q9ULM0 1364 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 PRPF40AO75400 957 aaKnown RBP10.42□□□□□ -0.74
CD28-201ENST00000324106 ESR2Q92731 530 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 KRT23Q9C075 422 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 SH2D4AQ9H788 454 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 STX8Q9UNK0 236 aa10.42□□□□□ -0.74
CD28-201ENST00000324106 SMTNL1A8MU46 457 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 CYP7A1P22680 504 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 LMBR1LQ6UX01 489 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 LRRC27Q9C0I9 530 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 TSPY26PQ9H489 355 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 CHPF2Q9P2E5 772 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 RBM27Q9P2N5 1060 aaKnown RBP10.41□□□□□ -0.74
CD28-201ENST00000324106 GRM1Q13255 1194 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 HSP90AA2PQ14568 343 aaPredicted RBP10.41□□□□□ -0.74
CD28-201ENST00000324106 TMEM67Q5HYA8 995 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 NCOA7Q8NI08 942 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 CCDC87Q9NVE4 849 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 BABAM1Q9NWV8 329 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 SHANK2Q9UPX8 1470 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 AMPD3Q01432 767 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 SCAND2PQ9GZW5 306 aaPredicted RBP10.41□□□□□ -0.74
CD28-201ENST00000324106 SNRKQ9NRH2 765 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 ZFYVE9O95405 1425 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 EIF6P56537 245 aaKnown RBP10.41□□□□□ -0.74
CD28-201ENST00000324106 VPS36Q86VN1 386 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 DRC1Q96MC2 740 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 VEZTQ9HBM0 779 aa10.41□□□□□ -0.74
CD28-201ENST00000324106 MAP3K5Q99683 1374 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 IRS4O14654 1257 aaPredicted RBP10.4□□□□□ -0.74
CD28-201ENST00000324106 IARSP41252 1262 aaKnown RBP10.4□□□□□ -0.74
CD28-201ENST00000324106 CCDC181Q5TID7 509 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 YTHDC2Q9H6S0 1430 aaKnown RBP10.4□□□□□ -0.74
CD28-201ENST00000324106 GNAT2P19087 354 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 ERMNQ8TAM6 284 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 DDX11Q96FC9 970 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 CALML4Q96GE6 196 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 TSPY3P0CV98 308 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 TSPY8P0CW00 308 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 MRE11P49959 708 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 CAVIN1Q6NZI2 390 aaKnown RBP10.4□□□□□ -0.74
CD28-201ENST00000324106 CERS3Q8IU89 383 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 CCDC148Q8NFR7 591 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 POLKQ9UBT6 870 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 MAST3O60307 1309 aa10.4□□□□□ -0.74
CD28-201ENST00000324106 EIF5P55010 431 aaKnown RBP10.4□□□□□ -0.75
CD28-201ENST00000324106 SH3TC1Q8TE82 1336 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 CFAP74Q9C0B2 1584 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 H0YIN7 160 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 HOXC9P31274 260 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 TEX35Q5T0J7 233 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 ZNF397Q8NF99 534 aaPredicted RBP10.39□□□□□ -0.75
CD28-201ENST00000324106 FAM83GA6ND36 823 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 TRIM27P14373 513 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 SETQ01105 290 aaPredicted RBP10.39□□□□□ -0.75
CD28-201ENST00000324106 ZNF772Q68DY9 489 aaPredicted RBP10.39□□□□□ -0.75
CD28-201ENST00000324106 TTC6Q86TZ1 520 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 SEPT11Q9NVA2 429 aaKnown RBP10.39□□□□□ -0.75
CD28-201ENST00000324106 BMP15O95972 392 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 ANXA1P04083 346 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 NASPP49321 788 aaPredicted RBP10.39□□□□□ -0.75
CD28-201ENST00000324106 VTI1AQ96AJ9 217 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 ABCC1P33527 1531 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 NUP62CLQ9H1M0 184 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 TRPC5Q9UL62 973 aaPredicted RBP10.39□□□□□ -0.75
CD28-201ENST00000324106 SAMM50Q9Y512 469 aa10.39□□□□□ -0.75
CD28-201ENST00000324106 PIK3C2GO75747 1445 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 APBA3O96018 575 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 ZRSR2Q15696 482 aaKnown RBP10.38□□□□□ -0.75
CD28-201ENST00000324106 FAM98CQ17RN3 349 aaKnown RBP10.38□□□□□ -0.75
CD28-201ENST00000324106 USP37Q86T82 979 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 RHPN1Q8TCX5 695 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 DDX21Q9NR30 783 aaKnown RBP eCLIP10.38□□□□□ -0.75
CD28-201ENST00000324106 PPRC1Q5VV67 1664 aaKnown RBP10.38□□□□□ -0.75
CD28-201ENST00000324106 F8W031 263 aaPredicted RBP10.38□□□□□ -0.75
CD28-201ENST00000324106 MCM5P33992 734 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 FKBP15Q5T1M5 1219 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 TTLL5Q6EMB2 1281 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 EYA1Q99502 592 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 MAP3K19Q56UN5 1328 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 RNMTO43148 476 aaKnown RBP10.38□□□□□ -0.75
CD28-201ENST00000324106 HOXB7P09629 217 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 RNF214Q8ND24 703 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 UPF3BQ9BZI7 483 aaKnown RBP10.38□□□□□ -0.75
CD28-201ENST00000324106 DISP3Q9P2K9 1392 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 TMEM2Q9UHN6 1383 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 LIMCH1Q9UPQ0 1083 aa10.38□□□□□ -0.75
CD28-201ENST00000324106 LDHBP07195 334 aaKnown RBP10.37□□□□□ -0.75
CD28-201ENST00000324106 UBA7P41226 1012 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms