RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 NPHP3Q7Z494 1330 aa19.5■□□□□ 0.71
PDE1C-201ENST00000321453 IQCB1Q15051 598 aa19.5■□□□□ 0.71
PDE1C-201ENST00000321453 FTOQ9C0B1 505 aaKnown RBP eCLIP19.5■□□□□ 0.71
PDE1C-201ENST00000321453 SH2B1Q9NRF2 756 aaPredicted RBP19.5■□□□□ 0.71
PDE1C-201ENST00000321453 TAF6LQ9Y6J9 622 aa19.5■□□□□ 0.71
PDE1C-201ENST00000321453 UHRF1BP1LA0JNW5 1464 aa19.49■□□□□ 0.71
PDE1C-201ENST00000321453 PPFIA3O75145 1194 aa19.49■□□□□ 0.71
PDE1C-201ENST00000321453 OS9Q13438 667 aaPredicted RBP19.49■□□□□ 0.71
PDE1C-201ENST00000321453 ZSCAN31Q96LW9 406 aaPredicted RBP19.49■□□□□ 0.71
PDE1C-201ENST00000321453 LMTK2Q8IWU2 1503 aa19.49■□□□□ 0.71
PDE1C-201ENST00000321453 SRGAP3O43295 1099 aa19.49■□□□□ 0.71
PDE1C-201ENST00000321453 TNNT3P45378 269 aaPredicted RBP19.49■□□□□ 0.71
PDE1C-201ENST00000321453 SCAND2PQ9GZW5 306 aaPredicted RBP19.49■□□□□ 0.71
PDE1C-201ENST00000321453 USP44Q9H0E7 712 aa19.49■□□□□ 0.71
PDE1C-201ENST00000321453 JAK2O60674 1132 aa19.48■□□□□ 0.71
PDE1C-201ENST00000321453 IFIT2P09913 472 aaKnown RBP19.48■□□□□ 0.71
PDE1C-201ENST00000321453 ZSWIM6Q9HCJ5 1215 aa19.48■□□□□ 0.71
PDE1C-201ENST00000321453 H2AFXP16104 143 aaPredicted RBP19.48■□□□□ 0.71
PDE1C-201ENST00000321453 HSP90AB2PQ58FF8 381 aa19.48■□□□□ 0.71
PDE1C-201ENST00000321453 KRBA2Q6ZNG9 492 aa19.48■□□□□ 0.71
PDE1C-201ENST00000321453 ELP1O95163 1332 aa19.48■□□□□ 0.71
PDE1C-201ENST00000321453 ASXL2Q76L83 1435 aa19.47■□□□□ 0.71
PDE1C-201ENST00000321453 ATP7BP35670 1465 aa19.47■□□□□ 0.71
PDE1C-201ENST00000321453 SIGLEC1Q9BZZ2 1709 aa19.47■□□□□ 0.71
PDE1C-201ENST00000321453 GYS2P54840 703 aa19.47■□□□□ 0.71
PDE1C-201ENST00000321453 AOPEPQ8N6M6 819 aa19.47■□□□□ 0.71
PDE1C-201ENST00000321453 RBM8AQ9Y5S9 174 aaKnown RBP19.47■□□□□ 0.71
PDE1C-201ENST00000321453 HTATSF1O43719 755 aaKnown RBP19.46■□□□□ 0.71
PDE1C-201ENST00000321453 CCDC34Q96HJ3 373 aa19.46■□□□□ 0.71
PDE1C-201ENST00000321453 TRIM66O15016 1216 aa19.46■□□□□ 0.71
PDE1C-201ENST00000321453 SLFNL1Q499Z3 407 aa19.46■□□□□ 0.71
PDE1C-201ENST00000321453 C10orf67Q8IYJ2 551 aa19.46■□□□□ 0.71
PDE1C-201ENST00000321453 SMARCE1Q969G3 411 aa19.46■□□□□ 0.71
PDE1C-201ENST00000321453 PREX1Q8TCU6 1659 aa19.46■□□□□ 0.71
PDE1C-201ENST00000321453 CDC25BP30305 580 aa19.46■□□□□ 0.71
PDE1C-201ENST00000321453 RBM43Q6ZSC3 357 aaKnown RBP19.46■□□□□ 0.71
PDE1C-201ENST00000321453 HOMER1Q86YM7 354 aa19.46■□□□□ 0.71
PDE1C-201ENST00000321453 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
PDE1C-201ENST00000321453 ZKSCAN1P17029 563 aaPredicted RBP19.45■□□□□ 0.7
PDE1C-201ENST00000321453 SLC20A2Q08357 652 aa19.45■□□□□ 0.7
PDE1C-201ENST00000321453 E4F1Q66K89 784 aaPredicted RBP19.45■□□□□ 0.7
PDE1C-201ENST00000321453 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
PDE1C-201ENST00000321453 ABCA9Q8IUA7 1624 aa19.45■□□□□ 0.7
PDE1C-201ENST00000321453 NFATC2IPQ8NCF5 419 aa19.45■□□□□ 0.7
PDE1C-201ENST00000321453 FAM227BQ96M60 508 aa19.45■□□□□ 0.7
PDE1C-201ENST00000321453 FRMPD1Q5SYB0 1578 aa19.45■□□□□ 0.7
PDE1C-201ENST00000321453 CREB3L3Q68CJ9 461 aa19.45■□□□□ 0.7
PDE1C-201ENST00000321453 MRFAP1L1Q96HT8 127 aa19.45■□□□□ 0.7
PDE1C-201ENST00000321453 PPP1R13BQ96KQ4 1090 aa19.45■□□□□ 0.7
PDE1C-201ENST00000321453 FMNL2Q96PY5 1086 aa19.45■□□□□ 0.7
PDE1C-201ENST00000321453 RSPH14Q9UHP6 348 aa19.45■□□□□ 0.7
PDE1C-201ENST00000321453 LCMT1Q9UIC8 334 aa19.45■□□□□ 0.7
PDE1C-201ENST00000321453 AOX1Q06278 1338 aa19.44■□□□□ 0.7
PDE1C-201ENST00000321453 NUTM2FA1L443 756 aa19.44■□□□□ 0.7
PDE1C-201ENST00000321453 MTHFSDQ2M296 383 aaKnown RBP19.44■□□□□ 0.7
PDE1C-201ENST00000321453 TMCO3Q6UWJ1 677 aa19.44■□□□□ 0.7
PDE1C-201ENST00000321453 FAM177A1Q8N128 213 aaPredicted RBP19.44■□□□□ 0.7
PDE1C-201ENST00000321453 PHAXQ9H814 394 aaKnown RBP19.44■□□□□ 0.7
PDE1C-201ENST00000321453 CRB1P82279 1406 aa19.44■□□□□ 0.7
PDE1C-201ENST00000321453 SMC2O95347 1197 aa19.43■□□□□ 0.7
PDE1C-201ENST00000321453 NEMFO60524 1076 aa19.43■□□□□ 0.7
PDE1C-201ENST00000321453 TMC6Q7Z403 805 aa19.43■□□□□ 0.7
PDE1C-201ENST00000321453 DHX40Q8IX18 779 aaKnown RBP19.43■□□□□ 0.7
PDE1C-201ENST00000321453 SSH3Q8TE77 659 aa19.43■□□□□ 0.7
PDE1C-201ENST00000321453 CHMP4CQ96CF2 233 aa19.43■□□□□ 0.7
PDE1C-201ENST00000321453 DNAI1Q9UI46 699 aa19.43■□□□□ 0.7
PDE1C-201ENST00000321453 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.43■□□□□ 0.7
PDE1C-201ENST00000321453 TTC21BQ7Z4L5 1316 aa19.43■□□□□ 0.7
PDE1C-201ENST00000321453 PDCP20941 246 aa19.42■□□□□ 0.7
PDE1C-201ENST00000321453 STX1AQ16623 288 aa19.42■□□□□ 0.7
PDE1C-201ENST00000321453 BRF1Q92994 677 aa19.42■□□□□ 0.7
PDE1C-201ENST00000321453 GOLPH3LQ9H4A5 285 aa19.42■□□□□ 0.7
PDE1C-201ENST00000321453 MYO5BQ9ULV0 1848 aa19.42■□□□□ 0.7
PDE1C-201ENST00000321453 EPB41L2O43491 1005 aaKnown RBP19.42■□□□□ 0.7
PDE1C-201ENST00000321453 NBPF7P0C2Y1 421 aaPredicted RBP19.42■□□□□ 0.7
PDE1C-201ENST00000321453 PTPN21Q16825 1174 aa19.42■□□□□ 0.7
PDE1C-201ENST00000321453 CCAR1Q8IX12 1150 aaKnown RBP19.42■□□□□ 0.7
PDE1C-201ENST00000321453 H3BQV1 296 aa19.42■□□□□ 0.7
PDE1C-201ENST00000321453 TEX35Q5T0J7 233 aa19.42■□□□□ 0.7
PDE1C-201ENST00000321453 IFFO2Q5TF58 517 aa19.42■□□□□ 0.7
PDE1C-201ENST00000321453 UBXN4Q92575 508 aa19.42■□□□□ 0.7
PDE1C-201ENST00000321453 CPS1P31327 1500 aa19.41■□□□□ 0.7
PDE1C-201ENST00000321453 SARM1Q6SZW1 724 aa19.41■□□□□ 0.7
PDE1C-201ENST00000321453 OAS2P29728 719 aaKnown RBP19.41■□□□□ 0.7
PDE1C-201ENST00000321453 IRX3P78415 501 aaPredicted RBP19.41■□□□□ 0.7
PDE1C-201ENST00000321453 NECTIN1Q15223 517 aa19.41■□□□□ 0.7
PDE1C-201ENST00000321453 CCDC191Q8NCU4 936 aa19.41■□□□□ 0.7
PDE1C-201ENST00000321453 RUFY2Q8WXA3 655 aa19.41■□□□□ 0.7
PDE1C-201ENST00000321453 CLTCQ00610 1675 aaKnown RBP19.4■□□□□ 0.7
PDE1C-201ENST00000321453 BLOC1S2Q6QNY1 142 aa19.4■□□□□ 0.7
PDE1C-201ENST00000321453 NBPF11Q86T75 865 aa19.4■□□□□ 0.7
PDE1C-201ENST00000321453 URI1O94763 535 aaPredicted RBP19.4■□□□□ 0.7
PDE1C-201ENST00000321453 MNS1Q8NEH6 495 aa19.4■□□□□ 0.7
PDE1C-201ENST00000321453 SLC27A2O14975 620 aa19.39■□□□□ 0.7
PDE1C-201ENST00000321453 RNF20Q5VTR2 975 aa19.39■□□□□ 0.7
PDE1C-201ENST00000321453 CCDC30Q5VVM6 783 aa19.39■□□□□ 0.7
PDE1C-201ENST00000321453 ARMCX5Q6P1M9 558 aa19.39■□□□□ 0.7
PDE1C-201ENST00000321453 L2HGDHQ9H9P8 463 aa19.39■□□□□ 0.7
PDE1C-201ENST00000321453 ARAP3Q8WWN8 1544 aa19.39■□□□□ 0.69
PDE1C-201ENST00000321453 CARD6Q9BX69 1037 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms