RNA–Protein interactions for RNA: ENST00000321374.9

CCDC33-202, Transcript of coiled-coil domain containing 33, humanhuman

TSL 2

Gene CCDC33, Length 1,450 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-202ENST00000321374 ZNF652Q9Y2D9 606 aa15.01□□□□□ -0.01
CCDC33-202ENST00000321374 ADAMTSL1Q8N6G6 1762 aa15.01□□□□□ -0.01
CCDC33-202ENST00000321374 NPR1P16066 1061 aa15.01□□□□□ -0.01
CCDC33-202ENST00000321374 PIP4K2AP48426 406 aaPredicted RBP15.01□□□□□ -0.01
CCDC33-202ENST00000321374 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
CCDC33-202ENST00000321374 PDE3AQ14432 1141 aa15.01□□□□□ -0.01
CCDC33-202ENST00000321374 NFE2L2Q16236 605 aa15.01□□□□□ -0.01
CCDC33-202ENST00000321374 TMEM88BA6NKF7 163 aa15□□□□□ -0.01
CCDC33-202ENST00000321374 KCNQ3O43525 872 aa15□□□□□ -0.01
CCDC33-202ENST00000321374 BCAR3O75815 825 aa15□□□□□ -0.01
CCDC33-202ENST00000321374 FKBP4Q02790 459 aaKnown RBP eCLIP15□□□□□ -0.01
CCDC33-202ENST00000321374 EAPPQ56P03 285 aaPredicted RBP15□□□□□ -0.01
CCDC33-202ENST00000321374 C20orf194Q5TEA3 1177 aa15□□□□□ -0.01
CCDC33-202ENST00000321374 AIDAQ96BJ3 306 aa15□□□□□ -0.01
CCDC33-202ENST00000321374 PRDM10Q9NQV6 1147 aa15□□□□□ -0.01
CCDC33-202ENST00000321374 USP16Q9Y5T5 823 aa15□□□□□ -0.01
CCDC33-202ENST00000321374 ZNF541Q9H0D2 1346 aa14.99□□□□□ -0.01
CCDC33-202ENST00000321374 FANCIQ9NVI1 1328 aa14.99□□□□□ -0.01
CCDC33-202ENST00000321374 HACL1Q9UJ83 578 aa14.99□□□□□ -0.01
CCDC33-202ENST00000321374 ITGBL1O95965 494 aaPredicted RBP14.98□□□□□ -0.01
CCDC33-202ENST00000321374 CTCFP49711 727 aaPredicted RBP14.98□□□□□ -0.01
CCDC33-202ENST00000321374 VEGFBP49765 207 aa14.98□□□□□ -0.01
CCDC33-202ENST00000321374 RARSP54136 660 aaKnown RBP14.98□□□□□ -0.01
CCDC33-202ENST00000321374 ZNF277Q9NRM2 450 aaPredicted RBP14.98□□□□□ -0.01
CCDC33-202ENST00000321374 PRAMEF22A3QJZ6 481 aa14.97□□□□□ -0.01
CCDC33-202ENST00000321374 KLRG2A4D1S0 409 aaPredicted RBP14.97□□□□□ -0.01
CCDC33-202ENST00000321374 EPHX2P34913 555 aa14.97□□□□□ -0.01
CCDC33-202ENST00000321374 TPTE2Q6XPS3 522 aa14.97□□□□□ -0.01
CCDC33-202ENST00000321374 PHACTR3Q96KR7 559 aa14.97□□□□□ -0.01
CCDC33-202ENST00000321374 NIP7Q9Y221 180 aaKnown RBP eCLIP14.97□□□□□ -0.01
CCDC33-202ENST00000321374 LAMB4A4D0S4 1761 aa14.96□□□□□ -0.01
CCDC33-202ENST00000321374 RGL2O15211 777 aa14.96□□□□□ -0.01
CCDC33-202ENST00000321374 SNRPA1P09661 255 aaKnown RBP14.96□□□□□ -0.01
CCDC33-202ENST00000321374 OLFM4Q6UX06 510 aa14.96□□□□□ -0.01
CCDC33-202ENST00000321374 PNMA8AQ86V59 439 aaPredicted RBP14.96□□□□□ -0.01
CCDC33-202ENST00000321374 RTKN2Q8IZC4 609 aa14.96□□□□□ -0.01
CCDC33-202ENST00000321374 CLEC11AQ9Y240 323 aa14.96□□□□□ -0.01
CCDC33-202ENST00000321374 RBM19Q9Y4C8 960 aaKnown RBP14.96□□□□□ -0.01
CCDC33-202ENST00000321374 MS4A1P11836 297 aa14.95□□□□□ -0.02
CCDC33-202ENST00000321374 AAMPQ13685 434 aa14.95□□□□□ -0.02
CCDC33-202ENST00000321374 IARSP41252 1262 aaKnown RBP14.95□□□□□ -0.02
CCDC33-202ENST00000321374 RTF1Q92541 710 aaKnown RBP14.95□□□□□ -0.02
CCDC33-202ENST00000321374 WBP1LQ9NX94 342 aa14.95□□□□□ -0.02
CCDC33-202ENST00000321374 RASSF10A6NK89 507 aa14.94□□□□□ -0.02
CCDC33-202ENST00000321374 FAM177BA6PVY3 158 aa14.94□□□□□ -0.02
CCDC33-202ENST00000321374 FZD9O00144 591 aa14.94□□□□□ -0.02
CCDC33-202ENST00000321374 ALDH1B1P30837 517 aa14.94□□□□□ -0.02
CCDC33-202ENST00000321374 LBX1P52954 281 aa14.94□□□□□ -0.02
CCDC33-202ENST00000321374 EXOSC9Q06265 439 aaKnown RBP14.94□□□□□ -0.02
CCDC33-202ENST00000321374 CENPQQ7L2Z9 268 aaPredicted RBP14.94□□□□□ -0.02
CCDC33-202ENST00000321374 MCM10Q7L590 875 aa14.94□□□□□ -0.02
CCDC33-202ENST00000321374 CNTROBQ8N137 903 aa14.94□□□□□ -0.02
CCDC33-202ENST00000321374 GPC2Q8N158 579 aa14.94□□□□□ -0.02
CCDC33-202ENST00000321374 TSR2Q969E8 191 aaKnown RBP14.94□□□□□ -0.02
CCDC33-202ENST00000321374 DLG5Q8TDM6 1919 aa14.93□□□□□ -0.02
CCDC33-202ENST00000321374 NBPF26B4DH59 902 aa14.93□□□□□ -0.02
CCDC33-202ENST00000321374 TCERG1O14776 1098 aaKnown RBP14.93□□□□□ -0.02
CCDC33-202ENST00000321374 GTF2E1P29083 439 aaPredicted RBP14.93□□□□□ -0.02
CCDC33-202ENST00000321374 GNAI1P63096 354 aa14.93□□□□□ -0.02
CCDC33-202ENST00000321374 MAP1SQ66K74 1059 aaPredicted RBP14.93□□□□□ -0.02
CCDC33-202ENST00000321374 NBPF10Q6P3W6 841 aaKnown RBP14.93□□□□□ -0.02
CCDC33-202ENST00000321374 NBPF15Q8N660 670 aa14.93□□□□□ -0.02
CCDC33-202ENST00000321374 FRAT1Q92837 279 aaPredicted RBP14.93□□□□□ -0.02
CCDC33-202ENST00000321374 SNED1Q8TER0 1413 aa14.93□□□□□ -0.02
CCDC33-202ENST00000321374 DEFB115Q30KQ5 88 aa14.92□□□□□ -0.02
CCDC33-202ENST00000321374 SYNE4Q8N205 404 aa14.92□□□□□ -0.02
CCDC33-202ENST00000321374 JDP2Q8WYK2 163 aa14.92□□□□□ -0.02
CCDC33-202ENST00000321374 ZNF428Q96B54 188 aa14.92□□□□□ -0.02
CCDC33-202ENST00000321374 PSMD1Q99460 953 aa14.92□□□□□ -0.02
CCDC33-202ENST00000321374 IFT57Q9NWB7 429 aa14.92□□□□□ -0.02
CCDC33-202ENST00000321374 NUP98P52948 1817 aa14.92□□□□□ -0.02
CCDC33-202ENST00000321374 THSD7BQ9C0I4 1608 aa14.91□□□□□ -0.02
CCDC33-202ENST00000321374 ABT1Q9ULW3 272 aaKnown RBP14.91□□□□□ -0.02
CCDC33-202ENST00000321374 ABCC12Q96J65 1359 aa14.91□□□□□ -0.02
CCDC33-202ENST00000321374 LTBP1Q14766 1721 aa14.91□□□□□ -0.02
CCDC33-202ENST00000321374 COL4A5P29400 1685 aa14.9□□□□□ -0.02
CCDC33-202ENST00000321374 MAP2K1Q02750 393 aaPredicted RBP14.9□□□□□ -0.02
CCDC33-202ENST00000321374 HLFQ16534 295 aa14.9□□□□□ -0.02
CCDC33-202ENST00000321374 CRY2Q49AN0 593 aa14.9□□□□□ -0.02
CCDC33-202ENST00000321374 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
CCDC33-202ENST00000321374 SMC4Q9NTJ3 1288 aa14.9□□□□□ -0.02
CCDC33-202ENST00000321374 WDR33Q9C0J8 1336 aaKnown RBP14.9□□□□□ -0.02
CCDC33-202ENST00000321374 HSPA8P11142 646 aaKnown RBP14.89□□□□□ -0.03
CCDC33-202ENST00000321374 LMOD1P29536 600 aaPredicted RBP14.89□□□□□ -0.03
CCDC33-202ENST00000321374 EIF6P56537 245 aaKnown RBP14.89□□□□□ -0.03
CCDC33-202ENST00000321374 DCTN1Q14203 1278 aa14.89□□□□□ -0.03
CCDC33-202ENST00000321374 NYXQ9GZU5 481 aa14.89□□□□□ -0.03
CCDC33-202ENST00000321374 DDX21Q9NR30 783 aaKnown RBP eCLIP14.89□□□□□ -0.03
CCDC33-202ENST00000321374 TRPM7Q96QT4 1865 aa14.89□□□□□ -0.03
CCDC33-202ENST00000321374 ALDH1L2Q3SY69 923 aa14.89□□□□□ -0.03
CCDC33-202ENST00000321374 CC2D2BQ6DHV5 1058 aa14.89□□□□□ -0.03
CCDC33-202ENST00000321374 GJA3Q9Y6H8 435 aa14.89□□□□□ -0.03
CCDC33-202ENST00000321374 KDM3BQ7LBC6 1761 aa14.88□□□□□ -0.03
CCDC33-202ENST00000321374 KIF16BQ96L93 1317 aa14.88□□□□□ -0.03
CCDC33-202ENST00000321374 RIC1Q4ADV7 1423 aa14.88□□□□□ -0.03
CCDC33-202ENST00000321374 HTATSF1O43719 755 aaKnown RBP14.88□□□□□ -0.03
CCDC33-202ENST00000321374 NUTM1Q86Y26 1132 aa14.88□□□□□ -0.03
CCDC33-202ENST00000321374 PANK1Q8TE04 598 aa14.88□□□□□ -0.03
CCDC33-202ENST00000321374 RPGRQ92834 1020 aaKnown RBP14.88□□□□□ -0.03
CCDC33-202ENST00000321374 LAS1LQ9Y4W2 734 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms