RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 SPATA32Q96LK8 384 aa11.44□□□□□ -0.58
RPGR-201ENST00000318842 EPC1Q9H2F5 836 aa11.44□□□□□ -0.58
RPGR-201ENST00000318842 NCOA5Q9HCD5 579 aaKnown RBP11.44□□□□□ -0.58
RPGR-201ENST00000318842 CLIP2Q9UDT6 1046 aa11.44□□□□□ -0.58
RPGR-201ENST00000318842 CYP46A1Q9Y6A2 500 aa11.44□□□□□ -0.58
RPGR-201ENST00000318842 DLC1Q96QB1 1528 aa11.43□□□□□ -0.58
RPGR-201ENST00000318842 BIN1O00499 593 aa11.43□□□□□ -0.58
RPGR-201ENST00000318842 TAF7LQ5H9L4 462 aa11.43□□□□□ -0.58
RPGR-201ENST00000318842 CREB3L3Q68CJ9 461 aa11.43□□□□□ -0.58
RPGR-201ENST00000318842 SSH3Q8TE77 659 aa11.43□□□□□ -0.58
RPGR-201ENST00000318842 ZNF215Q9UL58 517 aaPredicted RBP11.43□□□□□ -0.58
RPGR-201ENST00000318842 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.43□□□□□ -0.58
RPGR-201ENST00000318842 GOLGB1Q14789 3259 aaKnown RBP11.43□□□□□ -0.58
RPGR-201ENST00000318842 CCT2P78371 535 aaKnown RBP11.43□□□□□ -0.58
RPGR-201ENST00000318842 ARAP3Q8WWN8 1544 aa11.43□□□□□ -0.58
RPGR-201ENST00000318842 GNAT3A8MTJ3 354 aa11.42□□□□□ -0.58
RPGR-201ENST00000318842 ZNF165P49910 485 aa11.42□□□□□ -0.58
RPGR-201ENST00000318842 ELF2Q15723 593 aa11.42□□□□□ -0.58
RPGR-201ENST00000318842 FAM184AQ8NB25 1140 aa11.42□□□□□ -0.58
RPGR-201ENST00000318842 PEAK1Q9H792 1746 aa11.42□□□□□ -0.58
RPGR-201ENST00000318842 HSP90B1P14625 803 aaKnown RBP11.42□□□□□ -0.58
RPGR-201ENST00000318842 FAM200AQ8TCP9 573 aa11.42□□□□□ -0.58
RPGR-201ENST00000318842 EAF2Q96CJ1 260 aaPredicted RBP11.42□□□□□ -0.58
RPGR-201ENST00000318842 MLH3Q9UHC1 1453 aa11.42□□□□□ -0.58
RPGR-201ENST00000318842 GPHNQ9NQX3 736 aaPredicted RBP11.42□□□□□ -0.58
RPGR-201ENST00000318842 C9orf78Q9NZ63 289 aaPredicted RBP11.42□□□□□ -0.58
RPGR-201ENST00000318842 SLC27A2O14975 620 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 GTF2F1P35269 517 aaKnown RBP eCLIP11.41□□□□□ -0.58
RPGR-201ENST00000318842 LEO1Q8WVC0 666 aaPredicted RBP11.41□□□□□ -0.58
RPGR-201ENST00000318842 GTF3C6Q969F1 213 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 FSD1Q9BTV5 496 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 MAP3K2Q9Y2U5 619 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 KIF24Q5T7B8 1368 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 ZNF75DP51815 510 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 UVSSAQ2YD98 709 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 HSP90AB3PQ58FF7 597 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 TMEM87AQ8NBN3 555 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 BRF1Q92994 677 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 KIF1BPQ96EK5 621 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 DNAJC2Q99543 621 aaKnown RBP11.41□□□□□ -0.58
RPGR-201ENST00000318842 GOLPH3LQ9H4A5 285 aa11.41□□□□□ -0.58
RPGR-201ENST00000318842 DIP2CQ9Y2E4 1556 aa11.4□□□□□ -0.58
RPGR-201ENST00000318842 MYL6BP14649 208 aa11.4□□□□□ -0.58
RPGR-201ENST00000318842 KRT85P78386 507 aa11.4□□□□□ -0.58
RPGR-201ENST00000318842 TOB2Q14106 344 aaPredicted RBP11.4□□□□□ -0.58
RPGR-201ENST00000318842 KMT5BQ4FZB7 885 aa11.4□□□□□ -0.58
RPGR-201ENST00000318842 LMOD2Q6P5Q4 547 aa11.4□□□□□ -0.58
RPGR-201ENST00000318842 FAM177A1Q8N128 213 aaPredicted RBP11.4□□□□□ -0.58
RPGR-201ENST00000318842 ANKRD7Q92527 254 aa11.4□□□□□ -0.58
RPGR-201ENST00000318842 LTKP29376 864 aa11.4□□□□□ -0.58
RPGR-201ENST00000318842 AATKQ6ZMQ8 1374 aa11.4□□□□□ -0.58
RPGR-201ENST00000318842 SLC39A6Q13433 755 aa11.4□□□□□ -0.59
RPGR-201ENST00000318842 CCDC171Q6TFL3 1326 aa11.39□□□□□ -0.59
RPGR-201ENST00000318842 SASH1O94885 1247 aa11.39□□□□□ -0.59
RPGR-201ENST00000318842 BEND3Q5T5X7 828 aa11.39□□□□□ -0.59
RPGR-201ENST00000318842 MTERF4Q7Z6M4 381 aaKnown RBP11.39□□□□□ -0.59
RPGR-201ENST00000318842 DNAAF4Q8WXU2 420 aa11.39□□□□□ -0.59
RPGR-201ENST00000318842 BBXQ8WY36 941 aaPredicted RBP11.39□□□□□ -0.59
RPGR-201ENST00000318842 CTNNA3Q9UI47 895 aa11.39□□□□□ -0.59
RPGR-201ENST00000318842 NECTIN1Q15223 517 aa11.39□□□□□ -0.59
RPGR-201ENST00000318842 CLASRPQ8N2M8 674 aaKnown RBP11.39□□□□□ -0.59
RPGR-201ENST00000318842 CCDC112Q8NEF3 446 aa11.39□□□□□ -0.59
RPGR-201ENST00000318842 SUCLG2Q96I99 432 aa11.39□□□□□ -0.59
RPGR-201ENST00000318842 TEFQ10587 303 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 FBXO38Q6PIJ6 1188 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 AEBP2Q6ZN18 517 aaPredicted RBP11.38□□□□□ -0.59
RPGR-201ENST00000318842 DDX46Q7L014 1031 aaKnown RBP11.38□□□□□ -0.59
RPGR-201ENST00000318842 PLCD3Q8N3E9 789 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 BICC1Q9H694 974 aaKnown RBP11.38□□□□□ -0.59
RPGR-201ENST00000318842 ZSWIM6Q9HCJ5 1215 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 COL15A1P39059 1388 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 FAM69CQ0P6D2 419 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 POLA2Q14181 598 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 EPHA10Q5JZY3 1008 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 VPS53Q5VIR6 699 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 SKILP12757 684 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 CEP135Q66GS9 1140 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 BLOC1S2Q6QNY1 142 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 ECHDC1Q9NTX5 307 aa11.38□□□□□ -0.59
RPGR-201ENST00000318842 PREX1Q8TCU6 1659 aa11.37□□□□□ -0.59
RPGR-201ENST00000318842 NBPF6Q5VWK0 638 aa11.37□□□□□ -0.59
RPGR-201ENST00000318842 AOPEPQ8N6M6 819 aa11.37□□□□□ -0.59
RPGR-201ENST00000318842 ABTB2Q8N961 1025 aa11.37□□□□□ -0.59
RPGR-201ENST00000318842 NBPF4Q96M43 638 aa11.37□□□□□ -0.59
RPGR-201ENST00000318842 ZKSCAN1P17029 563 aaPredicted RBP11.37□□□□□ -0.59
RPGR-201ENST00000318842 ERCC6LQ2NKX8 1250 aa11.37□□□□□ -0.59
RPGR-201ENST00000318842 KAZALD1Q96I82 304 aa11.37□□□□□ -0.59
RPGR-201ENST00000318842 CLTCQ00610 1675 aaKnown RBP11.36□□□□□ -0.59
RPGR-201ENST00000318842 H3BQV1 296 aa11.36□□□□□ -0.59
RPGR-201ENST00000318842 CTIFO43310 598 aaKnown RBP11.36□□□□□ -0.59
RPGR-201ENST00000318842 APOBRQ0VD83 1088 aa11.36□□□□□ -0.59
RPGR-201ENST00000318842 IFFO2Q5TF58 517 aa11.36□□□□□ -0.59
RPGR-201ENST00000318842 Q6ZUG5 572 aa11.36□□□□□ -0.59
RPGR-201ENST00000318842 A0A1B0GVL5 298 aa11.36□□□□□ -0.59
RPGR-201ENST00000318842 CCDC69A6NI79 296 aa11.36□□□□□ -0.59
RPGR-201ENST00000318842 GLRX3O76003 335 aaKnown RBP11.36□□□□□ -0.59
RPGR-201ENST00000318842 HOXC9P31274 260 aa11.36□□□□□ -0.59
RPGR-201ENST00000318842 GYS2P54840 703 aa11.36□□□□□ -0.59
RPGR-201ENST00000318842 ATP6V1DQ9Y5K8 247 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms