RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CYP46A1Q9Y6A2 500 aa11.45□□□□□ -0.58
PTPRA-202ENST00000318266 EDC4Q6P2E9 1401 aaKnown RBP11.45□□□□□ -0.58
PTPRA-202ENST00000318266 FOSBP53539 338 aa11.45□□□□□ -0.58
PTPRA-202ENST00000318266 SPATA32Q96LK8 384 aa11.45□□□□□ -0.58
PTPRA-202ENST00000318266 NR1I2O75469 434 aa11.45□□□□□ -0.58
PTPRA-202ENST00000318266 SLFN14P0C7P3 912 aa11.45□□□□□ -0.58
PTPRA-202ENST00000318266 KIF18AQ8NI77 898 aa11.45□□□□□ -0.58
PTPRA-202ENST00000318266 PHAXQ9H814 394 aaKnown RBP11.45□□□□□ -0.58
PTPRA-202ENST00000318266 TPCN1Q9ULQ1 816 aa11.45□□□□□ -0.58
PTPRA-202ENST00000318266 HDGFP51858 240 aaKnown RBP11.44□□□□□ -0.58
PTPRA-202ENST00000318266 KMT5BQ4FZB7 885 aa11.44□□□□□ -0.58
PTPRA-202ENST00000318266 RAB11FIP3O75154 756 aa11.44□□□□□ -0.58
PTPRA-202ENST00000318266 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
PTPRA-202ENST00000318266 CDK11BP21127 795 aaKnown RBP11.44□□□□□ -0.58
PTPRA-202ENST00000318266 ELF2Q15723 593 aa11.44□□□□□ -0.58
PTPRA-202ENST00000318266 DDX11Q96FC9 970 aa11.44□□□□□ -0.58
PTPRA-202ENST00000318266 TMEM51Q9NW97 253 aa11.44□□□□□ -0.58
PTPRA-202ENST00000318266 MAP3K19Q56UN5 1328 aa11.44□□□□□ -0.58
PTPRA-202ENST00000318266 CCDC61Q9Y6R9 512 aa11.43□□□□□ -0.58
PTPRA-202ENST00000318266 ATP7BP35670 1465 aa11.43□□□□□ -0.58
PTPRA-202ENST00000318266 NBPF7P0C2Y1 421 aaPredicted RBP11.43□□□□□ -0.58
PTPRA-202ENST00000318266 CCDC30Q5VVM6 783 aa11.43□□□□□ -0.58
PTPRA-202ENST00000318266 USP16Q9Y5T5 823 aa11.43□□□□□ -0.58
PTPRA-202ENST00000318266 CRB1P82279 1406 aa11.43□□□□□ -0.58
PTPRA-202ENST00000318266 AATKQ6ZMQ8 1374 aa11.43□□□□□ -0.58
PTPRA-202ENST00000318266 LARP1Q6PKG0 1096 aaKnown RBP11.42□□□□□ -0.58
PTPRA-202ENST00000318266 KRT222Q8N1A0 295 aa11.42□□□□□ -0.58
PTPRA-202ENST00000318266 ERCC4Q92889 916 aaPredicted RBP11.42□□□□□ -0.58
PTPRA-202ENST00000318266 PAXBP1Q9Y5B6 917 aa11.42□□□□□ -0.58
PTPRA-202ENST00000318266 GOLGA6L19H0YKK7 550 aa11.42□□□□□ -0.58
PTPRA-202ENST00000318266 PPFIA3O75145 1194 aa11.42□□□□□ -0.58
PTPRA-202ENST00000318266 ANXA1P04083 346 aa11.42□□□□□ -0.58
PTPRA-202ENST00000318266 GABPB1Q06547 395 aaPredicted RBP11.42□□□□□ -0.58
PTPRA-202ENST00000318266 TERF2Q15554 542 aa11.42□□□□□ -0.58
PTPRA-202ENST00000318266 PTPN14Q15678 1187 aa11.42□□□□□ -0.58
PTPRA-202ENST00000318266 VPS53Q5VIR6 699 aa11.42□□□□□ -0.58
PTPRA-202ENST00000318266 FBXO38Q6PIJ6 1188 aa11.42□□□□□ -0.58
PTPRA-202ENST00000318266 PLA2G4DQ86XP0 818 aa11.42□□□□□ -0.58
PTPRA-202ENST00000318266 PLEKHG1Q9ULL1 1385 aa11.42□□□□□ -0.58
PTPRA-202ENST00000318266 SKILP12757 684 aa11.41□□□□□ -0.58
PTPRA-202ENST00000318266 ZKSCAN1P17029 563 aaPredicted RBP11.41□□□□□ -0.58
PTPRA-202ENST00000318266 IL17RAQ96F46 866 aa11.41□□□□□ -0.58
PTPRA-202ENST00000318266 TAF6LQ9Y6J9 622 aa11.41□□□□□ -0.58
PTPRA-202ENST00000318266 MYO5BQ9ULV0 1848 aa11.41□□□□□ -0.58
PTPRA-202ENST00000318266 SSH3Q8TE77 659 aa11.41□□□□□ -0.58
PTPRA-202ENST00000318266 KIF1BPQ96EK5 621 aa11.41□□□□□ -0.58
PTPRA-202ENST00000318266 FAM227BQ96M60 508 aa11.41□□□□□ -0.58
PTPRA-202ENST00000318266 SH2B1Q9NRF2 756 aaPredicted RBP11.41□□□□□ -0.58
PTPRA-202ENST00000318266 NHSL1Q5SYE7 1610 aa11.41□□□□□ -0.58
PTPRA-202ENST00000318266 LEO1Q8WVC0 666 aaPredicted RBP11.41□□□□□ -0.58
PTPRA-202ENST00000318266 RBM8AQ9Y5S9 174 aaKnown RBP11.41□□□□□ -0.58
PTPRA-202ENST00000318266 MORC2Q9Y6X9 1032 aaPredicted RBP11.41□□□□□ -0.58
PTPRA-202ENST00000318266 C11orf57Q6ZUT1 292 aaPredicted RBP11.4□□□□□ -0.58
PTPRA-202ENST00000318266 LRRC8AQ8IWT6 810 aa11.4□□□□□ -0.58
PTPRA-202ENST00000318266 GTF3C6Q969F1 213 aa11.4□□□□□ -0.58
PTPRA-202ENST00000318266 ZSCAN31Q96LW9 406 aaPredicted RBP11.4□□□□□ -0.58
PTPRA-202ENST00000318266 HDGFL1Q5TGJ6 251 aa11.4□□□□□ -0.58
PTPRA-202ENST00000318266 ZNF397Q8NF99 534 aaPredicted RBP11.4□□□□□ -0.58
PTPRA-202ENST00000318266 PGBD1Q96JS3 809 aa11.4□□□□□ -0.58
PTPRA-202ENST00000318266 ZSWIM6Q9HCJ5 1215 aa11.4□□□□□ -0.58
PTPRA-202ENST00000318266 PA2G4Q9UQ80 394 aaKnown RBP11.4□□□□□ -0.58
PTPRA-202ENST00000318266 JAK2O60674 1132 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 LTV1Q96GA3 475 aaPredicted RBP11.39□□□□□ -0.59
PTPRA-202ENST00000318266 CLSTN2Q9H4D0 955 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 AOX1Q06278 1338 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 TMEM94Q12767 1356 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 BECN2A8MW95 431 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 TAF3Q5VWG9 929 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 CREB3L3Q68CJ9 461 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 TDRD7Q8NHU6 1098 aaKnown RBP11.39□□□□□ -0.59
PTPRA-202ENST00000318266 RUFY2Q8WXA3 655 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 FTOQ9C0B1 505 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTPRA-202ENST00000318266 NPHP3Q7Z494 1330 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 PRR36Q9H6K5 1346 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 CCDC69A6NI79 296 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 RBM6P78332 1123 aaKnown RBP11.39□□□□□ -0.59
PTPRA-202ENST00000318266 IRX5P78411 483 aaPredicted RBP11.39□□□□□ -0.59
PTPRA-202ENST00000318266 GORABQ5T7V8 394 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
PTPRA-202ENST00000318266 SCAND2PQ9GZW5 306 aaPredicted RBP11.39□□□□□ -0.59
PTPRA-202ENST00000318266 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
PTPRA-202ENST00000318266 GLRX3O76003 335 aaKnown RBP11.38□□□□□ -0.59
PTPRA-202ENST00000318266 TAF7Q15545 349 aaPredicted RBP11.38□□□□□ -0.59
PTPRA-202ENST00000318266 SYCP1Q15431 976 aa11.38□□□□□ -0.59
PTPRA-202ENST00000318266 LRRN4CLQ8ND94 238 aa11.38□□□□□ -0.59
PTPRA-202ENST00000318266 IFIT2P09913 472 aaKnown RBP11.37□□□□□ -0.59
PTPRA-202ENST00000318266 ERCC6LQ2NKX8 1250 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 BLOC1S2Q6QNY1 142 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 CLASRPQ8N2M8 674 aaKnown RBP11.37□□□□□ -0.59
PTPRA-202ENST00000318266 CCDC171Q6TFL3 1326 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 TTC21BQ7Z4L5 1316 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 PDCP20941 246 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 AMPHP49418 695 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 TTC21AQ8NDW8 1320 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 CCDC66A2RUB6 948 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 H3BQV1 296 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 EPB41L2O43491 1005 aaKnown RBP11.37□□□□□ -0.59
PTPRA-202ENST00000318266 NMIQ13287 307 aaPredicted RBP11.37□□□□□ -0.59
PTPRA-202ENST00000318266 NECTIN1Q15223 517 aa11.37□□□□□ -0.59
PTPRA-202ENST00000318266 IFFO2Q5TF58 517 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms