RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 POLR3AO14802 1390 aaPredicted RBP8.85□□□□□ -0.99
CDHR3-201ENST00000317716 TAF3Q5VWG9 929 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 BRINP3Q76B58 766 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 OGFRQ9NZT2 677 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 DNAI1Q9UI46 699 aa8.85□□□□□ -0.99
CDHR3-201ENST00000317716 SNW1Q13573 536 aaKnown RBP8.84□□□□□ -0.99
CDHR3-201ENST00000317716 CFAP100Q494V2 611 aa8.84□□□□□ -0.99
CDHR3-201ENST00000317716 CEP57L1Q8IYX8 460 aa8.84□□□□□ -0.99
CDHR3-201ENST00000317716 CERKQ8TCT0 537 aa8.84□□□□□ -0.99
CDHR3-201ENST00000317716 ZFYVE9O95405 1425 aa8.84□□□□□ -0.99
CDHR3-201ENST00000317716 TMEM131LA2VDJ0 1609 aa8.84□□□□□ -0.99
CDHR3-201ENST00000317716 PHACTR2O75167 634 aa8.84□□□□□ -0.99
CDHR3-201ENST00000317716 INSRP06213 1382 aa8.84□□□□□ -0.99
CDHR3-201ENST00000317716 CCT4P50991 539 aaKnown RBP8.84□□□□□ -0.99
CDHR3-201ENST00000317716 SYT10Q6XYQ8 523 aa8.84□□□□□ -0.99
CDHR3-201ENST00000317716 NPHP3Q7Z494 1330 aa8.84□□□□□ -0.99
CDHR3-201ENST00000317716 NAT10Q9H0A0 1025 aaKnown RBP8.84□□□□□ -0.99
CDHR3-201ENST00000317716 G2E3Q7L622 706 aa8.84□□□□□ -0.99
CDHR3-201ENST00000317716 PSMA5P28066 241 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 ARHGAP29Q52LW3 1261 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 AXDND1Q5T1B0 1012 aaPredicted RBP8.83□□□□□ -1
CDHR3-201ENST00000317716 PAXIP1Q6ZW49 1069 aaPredicted RBP8.83□□□□□ -1
CDHR3-201ENST00000317716 SIRT2Q8IXJ6 389 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 RASSF8Q8NHQ8 419 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 KIF2CQ99661 725 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 CWC15Q9P013 229 aaKnown RBP8.83□□□□□ -1
CDHR3-201ENST00000317716 ZNF215Q9UL58 517 aaPredicted RBP8.83□□□□□ -1
CDHR3-201ENST00000317716 BRD1O95696 1058 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 ZC3H13Q5T200 1668 aaKnown RBP8.83□□□□□ -1
CDHR3-201ENST00000317716 CCDC69A6NI79 296 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 MCM6Q14566 821 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 FAM182BQ5T319 152 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 CCDC30Q5VVM6 783 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 AOPEPQ8N6M6 819 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 CPLX3Q8WVH0 158 aa8.83□□□□□ -1
CDHR3-201ENST00000317716 CHMLP26374 656 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 NEK11Q8NG66 645 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 AK7Q96M32 723 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 H0YHG0 523 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 GCP02774 474 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 LIG1P18858 919 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 FSIP1Q8NA03 581 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 CHMP4CQ96CF2 233 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 MYO3AQ8NEV4 1616 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 SMTNL1A8MU46 457 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 HSPA1LP34931 641 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 PPP1R42Q7Z4L9 355 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 PRDM4Q9UKN5 801 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 ZDHHC9Q9Y397 364 aa8.82□□□□□ -1
CDHR3-201ENST00000317716 POLR3DP05423 398 aaPredicted RBP8.81□□□□□ -1
CDHR3-201ENST00000317716 BMS1Q14692 1282 aaKnown RBP8.81□□□□□ -1
CDHR3-201ENST00000317716 WASHC4Q2M389 1173 aa8.81□□□□□ -1
CDHR3-201ENST00000317716 NOM1Q5C9Z4 860 aaKnown RBP8.81□□□□□ -1
CDHR3-201ENST00000317716 CBX8Q9HC52 389 aa8.81□□□□□ -1
CDHR3-201ENST00000317716 LMOD1P29536 600 aaPredicted RBP8.81□□□□□ -1
CDHR3-201ENST00000317716 TAF7Q15545 349 aaPredicted RBP8.81□□□□□ -1
CDHR3-201ENST00000317716 PTPN21Q16825 1174 aa8.81□□□□□ -1
CDHR3-201ENST00000317716 ZNF397Q8NF99 534 aaPredicted RBP8.81□□□□□ -1
CDHR3-201ENST00000317716 ADAMTSL3P82987 1691 aa8.81□□□□□ -1
CDHR3-201ENST00000317716 REREQ9P2R6 1566 aa8.81□□□□□ -1
CDHR3-201ENST00000317716 SLU7O95391 586 aaKnown RBP8.81□□□□□ -1
CDHR3-201ENST00000317716 ERCC6LQ2NKX8 1250 aa8.81□□□□□ -1
CDHR3-201ENST00000317716 C1orf141Q5JVX7 400 aa8.81□□□□□ -1
CDHR3-201ENST00000317716 SCAND2PQ9GZW5 306 aaPredicted RBP8.81□□□□□ -1
CDHR3-201ENST00000317716 RABEP2Q9H5N1 569 aa8.81□□□□□ -1
CDHR3-201ENST00000317716 BTG4Q9NY30 223 aa8.81□□□□□ -1
CDHR3-201ENST00000317716 PAXBP1Q9Y5B6 917 aa8.81□□□□□ -1
CDHR3-201ENST00000317716 ZSCAN20P17040 1043 aaPredicted RBP8.8□□□□□ -1
CDHR3-201ENST00000317716 PPARDQ03181 441 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 FLIIQ13045 1269 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 CCAR1Q8IX12 1150 aaKnown RBP8.8□□□□□ -1
CDHR3-201ENST00000317716 CCDC191Q8NCU4 936 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 FEZ1Q99689 392 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 ARID5BQ14865 1188 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 TAF7LQ5H9L4 462 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 UNC5CLQ8IV45 518 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 PCMTD1Q96MG8 357 aaPredicted RBP8.8□□□□□ -1
CDHR3-201ENST00000317716 ST7Q9NRC1 585 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 MYOM2P54296 1465 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 GNG11P61952 73 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 OLFM4Q6UX06 510 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 RAPGEF4Q8WZA2 1011 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 PDLIM2Q96JY6 352 aa8.8□□□□□ -1
CDHR3-201ENST00000317716 PA2G4Q9UQ80 394 aaKnown RBP8.8□□□□□ -1
CDHR3-201ENST00000317716 PNMA6EA0A0J9YXQ4 647 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 KLHL10Q6JEL2 608 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 ZSCAN31Q96LW9 406 aaPredicted RBP8.79□□□□□ -1
CDHR3-201ENST00000317716 POLKQ9UBT6 870 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 UBR1Q8IWV7 1749 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 KRBA2Q6ZNG9 492 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 CHST3Q7LGC8 479 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 TSPYL1Q9H0U9 437 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 DDX19AQ9NUU7 478 aaKnown RBP8.79□□□□□ -1
CDHR3-201ENST00000317716 HSP90AB4PQ58FF6 505 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 NFXL1Q6ZNB6 911 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 RIC3Q7Z5B4 369 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 CENPHQ9H3R5 247 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.79□□□□□ -1
CDHR3-201ENST00000317716 RSPH14Q9UHP6 348 aa8.79□□□□□ -1
CDHR3-201ENST00000317716 HSP90AB3PQ58FF7 597 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms