RNA–Protein interactions for RNA: ENST00000317555.6

PGAM5-201, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 1 (best) BASIC

Gene PGAM5, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-201ENST00000317555 SENP3-EIF4A1A0A087X0R7 540 aa34.67■■■■□ 3.14
PGAM5-201ENST00000317555 UTP14AQ9BVJ6 771 aaKnown RBP34.67■■■■□ 3.14
PGAM5-201ENST00000317555 HYPKQ9NX55 129 aa34.67■■■■□ 3.14
PGAM5-201ENST00000317555 ELL2O00472 640 aaPredicted RBP34.66■■■■□ 3.14
PGAM5-201ENST00000317555 C7orf43Q8WVR3 580 aa34.66■■■■□ 3.14
PGAM5-201ENST00000317555 TCIRG1Q13488 830 aa34.65■■■■□ 3.14
PGAM5-201ENST00000317555 CCDC93Q567U6 631 aa34.65■■■■□ 3.14
PGAM5-201ENST00000317555 RPGRQ92834 1020 aaKnown RBP34.65■■■■□ 3.14
PGAM5-201ENST00000317555 WWC1Q8IX03 1113 aa34.64■■■■□ 3.14
PGAM5-201ENST00000317555 PLBD2Q8NHP8 589 aa34.64■■■■□ 3.14
PGAM5-201ENST00000317555 RNF123Q5XPI4 1314 aa34.63■■■■□ 3.13
PGAM5-201ENST00000317555 NCBP3Q53F19 620 aaKnown RBP34.63■■■■□ 3.13
PGAM5-201ENST00000317555 ANKRD13DQ6ZTN6 518 aa34.63■■■■□ 3.13
PGAM5-201ENST00000317555 NLRP10Q86W26 655 aa34.62■■■■□ 3.13
PGAM5-201ENST00000317555 C8orf58Q8NAV2 365 aa34.62■■■■□ 3.13
PGAM5-201ENST00000317555 HOXA10P31260 410 aaPredicted RBP34.6■■■■□ 3.13
PGAM5-201ENST00000317555 CHMP4AQ9BY43 222 aa34.6■■■■□ 3.13
PGAM5-201ENST00000317555 TSR2Q969E8 191 aaKnown RBP34.59■■■■□ 3.13
PGAM5-201ENST00000317555 NLRP3Q96P20 1036 aa34.59■■■■□ 3.13
PGAM5-201ENST00000317555 SLC10A5Q5PT55 438 aa34.58■■■■□ 3.13
PGAM5-201ENST00000317555 GLTPD2A6NH11 291 aa34.57■■■■□ 3.12
PGAM5-201ENST00000317555 TOMM70O94826 608 aa34.57■■■■□ 3.12
PGAM5-201ENST00000317555 OLFM4Q6UX06 510 aa34.57■■■■□ 3.12
PGAM5-201ENST00000317555 RTKN2Q8IZC4 609 aa34.57■■■■□ 3.12
PGAM5-201ENST00000317555 RBM17Q96I25 401 aaKnown RBP34.57■■■■□ 3.12
PGAM5-201ENST00000317555 TRMT112Q9UI30 125 aaKnown RBP34.57■■■■□ 3.12
PGAM5-201ENST00000317555 IL16Q14005 1332 aa34.56■■■■□ 3.12
PGAM5-201ENST00000317555 C3orf67Q6ZVT6 689 aa34.56■■■■□ 3.12
PGAM5-201ENST00000317555 C16orf71Q8IYS4 520 aaPredicted RBP34.56■■■■□ 3.12
PGAM5-201ENST00000317555 RRAGCQ9HB90 399 aa34.56■■■■□ 3.12
PGAM5-201ENST00000317555 LAMB2P55268 1798 aa34.55■■■■□ 3.12
PGAM5-201ENST00000317555 FKBP4Q02790 459 aaKnown RBP eCLIP34.55■■■■□ 3.12
PGAM5-201ENST00000317555 CCDC30Q5VVM6 783 aa34.55■■■■□ 3.12
PGAM5-201ENST00000317555 CRAMP1Q96RY5 1269 aa34.55■■■■□ 3.12
PGAM5-201ENST00000317555 SH3TC1Q8TE82 1336 aa34.55■■■■□ 3.12
PGAM5-201ENST00000317555 GOLGA2Q08379 1002 aa34.54■■■■□ 3.12
PGAM5-201ENST00000317555 TSPYL6Q8N831 410 aa34.54■■■■□ 3.12
PGAM5-201ENST00000317555 FAM9BQ8IZU0 186 aa34.53■■■■□ 3.12
PGAM5-201ENST00000317555 ISCA1Q9BUE6 129 aa34.53■■■■□ 3.12
PGAM5-201ENST00000317555 PHAXQ9H814 394 aaKnown RBP34.53■■■■□ 3.12
PGAM5-201ENST00000317555 CC2D2BQ6DHV5 1058 aa34.52■■■■□ 3.12
PGAM5-201ENST00000317555 DPY19L2Q6NUT2 758 aa34.52■■■■□ 3.12
PGAM5-201ENST00000317555 RIC3Q7Z5B4 369 aa34.52■■■■□ 3.12
PGAM5-201ENST00000317555 SALL2Q9Y467 1007 aaPredicted RBP34.52■■■■□ 3.12
PGAM5-201ENST00000317555 HCLS1P14317 486 aaPredicted RBP34.51■■■■□ 3.12
PGAM5-201ENST00000317555 ATP5J2-PTCD1G3V325 749 aa34.5■■■■□ 3.11
PGAM5-201ENST00000317555 SYNE4Q8N205 404 aa34.5■■■■□ 3.11
PGAM5-201ENST00000317555 PPEF1O14829 653 aaPredicted RBP34.49■■■■□ 3.11
PGAM5-201ENST00000317555 ZNF428Q96B54 188 aa34.49■■■■□ 3.11
PGAM5-201ENST00000317555 ZNF277Q9NRM2 450 aaPredicted RBP34.49■■■■□ 3.11
PGAM5-201ENST00000317555 HSPA6P17066 643 aa34.48■■■■□ 3.11
PGAM5-201ENST00000317555 WDR63Q8IWG1 891 aa34.48■■■■□ 3.11
PGAM5-201ENST00000317555 RBM46Q8TBY0 533 aaKnown RBP34.48■■■■□ 3.11
PGAM5-201ENST00000317555 CEP350Q5VT06 3117 aa34.48■■■■□ 3.11
PGAM5-201ENST00000317555 SNED1Q8TER0 1413 aa34.47■■■■□ 3.11
PGAM5-201ENST00000317555 TWISTNBQ3B726 338 aaPredicted RBP34.47■■■■□ 3.11
PGAM5-201ENST00000317555 DDX60Q8IY21 1712 aaKnown RBP34.47■■■■□ 3.11
PGAM5-201ENST00000317555 VEGFAP15692 232 aaPredicted RBP34.46■■■■□ 3.11
PGAM5-201ENST00000317555 TRIM28Q13263 835 aaKnown RBP34.46■■■■□ 3.11
PGAM5-201ENST00000317555 GRIPAP1Q4V328 841 aa34.46■■■■□ 3.11
PGAM5-201ENST00000317555 PSMD1Q99460 953 aa34.46■■■■□ 3.11
PGAM5-201ENST00000317555 WDR90Q96KV7 1748 aa34.46■■■■□ 3.11
PGAM5-201ENST00000317555 DDX58O95786 925 aaKnown RBP34.45■■■■□ 3.11
PGAM5-201ENST00000317555 STK31Q9BXU1 1019 aa34.45■■■■□ 3.11
PGAM5-201ENST00000317555 ABCC4O15439 1325 aa34.45■■■■□ 3.11
PGAM5-201ENST00000317555 TCERG1O14776 1098 aaKnown RBP34.44■■■■□ 3.1
PGAM5-201ENST00000317555 FAM89AQ96GI7 184 aa34.44■■■■□ 3.1
PGAM5-201ENST00000317555 FANCIQ9NVI1 1328 aa34.44■■■■□ 3.1
PGAM5-201ENST00000317555 IARSP41252 1262 aaKnown RBP34.43■■■■□ 3.1
PGAM5-201ENST00000317555 TMX4Q9H1E5 349 aaPredicted RBP34.43■■■■□ 3.1
PGAM5-201ENST00000317555 MYD88Q99836 296 aa34.42■■■■□ 3.1
PGAM5-201ENST00000317555 DDX46Q7L014 1031 aaKnown RBP34.41■■■■□ 3.1
PGAM5-201ENST00000317555 ATP6V0A2Q9Y487 856 aa34.4■■■■□ 3.1
PGAM5-201ENST00000317555 BBOX1O75936 387 aa34.39■■■■□ 3.1
PGAM5-201ENST00000317555 DDNO94850 711 aaPredicted RBP34.39■■■■□ 3.1
PGAM5-201ENST00000317555 RTL5Q5HYW3 569 aaPredicted RBP34.39■■■■□ 3.1
PGAM5-201ENST00000317555 TAF1P21675 1872 aa34.39■■■■□ 3.1
PGAM5-201ENST00000317555 FSTL1Q12841 308 aa34.38■■■■□ 3.09
PGAM5-201ENST00000317555 METTL22Q9BUU2 404 aaPredicted RBP34.38■■■■□ 3.09
PGAM5-201ENST00000317555 CACNA1FO60840 1977 aa34.38■■■■□ 3.09
PGAM5-201ENST00000317555 SLC51AQ86UW1 340 aa34.37■■■■□ 3.09
PGAM5-201ENST00000317555 CCDC191Q8NCU4 936 aa34.37■■■■□ 3.09
PGAM5-201ENST00000317555 POTECB2RU33 542 aa34.36■■■■□ 3.09
PGAM5-201ENST00000317555 GRAPQ13588 217 aa34.36■■■■□ 3.09
PGAM5-201ENST00000317555 KSR2Q6VAB6 950 aa34.36■■■■□ 3.09
PGAM5-201ENST00000317555 ZBTB38Q8NAP3 1195 aaPredicted RBP34.36■■■■□ 3.09
PGAM5-201ENST00000317555 GRAPLQ8TC17 118 aaPredicted RBP34.36■■■■□ 3.09
PGAM5-201ENST00000317555 MAP3K2Q9Y2U5 619 aa34.36■■■■□ 3.09
PGAM5-201ENST00000317555 IRS4O14654 1257 aaPredicted RBP34.35■■■■□ 3.09
PGAM5-201ENST00000317555 SF3B3Q15393 1217 aaKnown RBP34.35■■■■□ 3.09
PGAM5-201ENST00000317555 JDP2Q8WYK2 163 aa34.35■■■■□ 3.09
PGAM5-201ENST00000317555 PI4KAP2A4QPH2 592 aa34.34■■■■□ 3.09
PGAM5-201ENST00000317555 SLC4A2P04920 1241 aa34.34■■■■□ 3.09
PGAM5-201ENST00000317555 PI4KAP1Q8N8J0 262 aa34.34■■■■□ 3.09
PGAM5-201ENST00000317555 SMC1BQ8NDV3 1235 aa34.34■■■■□ 3.09
PGAM5-201ENST00000317555 CWC25Q9NXE8 425 aaPredicted RBP34.34■■■■□ 3.09
PGAM5-201ENST00000317555 ZNF541Q9H0D2 1346 aa34.33■■■■□ 3.09
PGAM5-201ENST00000317555 HSP90B1P14625 803 aaKnown RBP34.33■■■■□ 3.09
PGAM5-201ENST00000317555 EXOSC9Q06265 439 aaKnown RBP34.33■■■■□ 3.09
PGAM5-201ENST00000317555 SP8Q8IXZ3 490 aa34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms