RNA–Protein interactions for RNA: ENST00000317118.12

PDE4D-202, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-202ENST00000317118 ISCA1Q9BUE6 129 aa7.44□□□□□ -1.22
PDE4D-202ENST00000317118 NARFQ9UHQ1 456 aa7.44□□□□□ -1.22
PDE4D-202ENST00000317118 UBR3Q6ZT12 1888 aa7.43□□□□□ -1.22
PDE4D-202ENST00000317118 QSER1Q2KHR3 1735 aa7.43□□□□□ -1.22
PDE4D-202ENST00000317118 NEURL1BA8MQ27 555 aa7.43□□□□□ -1.22
PDE4D-202ENST00000317118 GNAI3P08754 354 aa7.43□□□□□ -1.22
PDE4D-202ENST00000317118 IRX6P78412 446 aaPredicted RBP7.43□□□□□ -1.22
PDE4D-202ENST00000317118 TRAPPC3LQ5T215 181 aa7.43□□□□□ -1.22
PDE4D-202ENST00000317118 CCDC191Q8NCU4 936 aa7.43□□□□□ -1.22
PDE4D-202ENST00000317118 HDAC5Q9UQL6 1122 aa7.43□□□□□ -1.22
PDE4D-202ENST00000317118 ZNF652Q9Y2D9 606 aa7.43□□□□□ -1.22
PDE4D-202ENST00000317118 EN1Q05925 392 aaPredicted RBP7.43□□□□□ -1.22
PDE4D-202ENST00000317118 EZH2Q15910 746 aaKnown RBP7.43□□□□□ -1.22
PDE4D-202ENST00000317118 MYD88Q99836 296 aa7.43□□□□□ -1.22
PDE4D-202ENST00000317118 PPP4R2Q9NY27 417 aa7.43□□□□□ -1.22
PDE4D-202ENST00000317118 ANKRD36CQ5JPF3 1778 aa7.42□□□□□ -1.22
PDE4D-202ENST00000317118 GCKRQ14397 625 aa7.42□□□□□ -1.22
PDE4D-202ENST00000317118 ZNF34Q8IZ26 560 aa7.42□□□□□ -1.22
PDE4D-202ENST00000317118 ARHGEF1Q92888 912 aaKnown RBP7.42□□□□□ -1.22
PDE4D-202ENST00000317118 USP44Q9H0E7 712 aa7.42□□□□□ -1.22
PDE4D-202ENST00000317118 ZBTB3Q9H5J0 574 aa7.42□□□□□ -1.22
PDE4D-202ENST00000317118 USP42Q9H9J4 1324 aaKnown RBP7.42□□□□□ -1.22
PDE4D-202ENST00000317118 C4AP0C0L4 1744 aa7.42□□□□□ -1.22
PDE4D-202ENST00000317118 HLFQ16534 295 aa7.42□□□□□ -1.22
PDE4D-202ENST00000317118 PARP10Q53GL7 1025 aa7.42□□□□□ -1.22
PDE4D-202ENST00000317118 TBC1D2BQ9UPU7 963 aa7.42□□□□□ -1.22
PDE4D-202ENST00000317118 ZNF330Q9Y3S2 320 aaPredicted RBP7.42□□□□□ -1.22
PDE4D-202ENST00000317118 C19orf67A6NJJ6 358 aa7.41□□□□□ -1.22
PDE4D-202ENST00000317118 UPF1Q92900 1129 aaKnown RBP eCLIP7.41□□□□□ -1.22
PDE4D-202ENST00000317118 CWC25Q9NXE8 425 aaPredicted RBP7.41□□□□□ -1.22
PDE4D-202ENST00000317118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.41□□□□□ -1.22
PDE4D-202ENST00000317118 H7C1W4 665 aa7.41□□□□□ -1.22
PDE4D-202ENST00000317118 GRM8O00222 908 aa7.41□□□□□ -1.22
PDE4D-202ENST00000317118 ZPR1O75312 459 aa7.41□□□□□ -1.22
PDE4D-202ENST00000317118 RFC4P35249 363 aa7.41□□□□□ -1.22
PDE4D-202ENST00000317118 SLC15A2Q16348 729 aa7.41□□□□□ -1.22
PDE4D-202ENST00000317118 ZNF827Q17R98 1081 aa7.41□□□□□ -1.22
PDE4D-202ENST00000317118 CWF19L2Q2TBE0 894 aaKnown RBP7.41□□□□□ -1.22
PDE4D-202ENST00000317118 NLRP10Q86W26 655 aa7.41□□□□□ -1.22
PDE4D-202ENST00000317118 REM2Q8IYK8 340 aaPredicted RBP7.41□□□□□ -1.22
PDE4D-202ENST00000317118 MEIS3Q99687 375 aa7.41□□□□□ -1.22
PDE4D-202ENST00000317118 BCL2L12Q9HB09 334 aa7.41□□□□□ -1.22
PDE4D-202ENST00000317118 NUP98P52948 1817 aa7.41□□□□□ -1.22
PDE4D-202ENST00000317118 GNAI2P04899 355 aa7.4□□□□□ -1.22
PDE4D-202ENST00000317118 AMIGO3Q86WK7 504 aa7.4□□□□□ -1.22
PDE4D-202ENST00000317118 RPAP2Q8IXW5 612 aaPredicted RBP7.4□□□□□ -1.22
PDE4D-202ENST00000317118 STK32BQ9NY57 414 aa7.4□□□□□ -1.22
PDE4D-202ENST00000317118 CDHR2Q9BYE9 1310 aa7.4□□□□□ -1.22
PDE4D-202ENST00000317118 PCCAP05165 728 aaPredicted RBP7.4□□□□□ -1.23
PDE4D-202ENST00000317118 UBTFL1P0CB47 393 aaPredicted RBP7.4□□□□□ -1.23
PDE4D-202ENST00000317118 CASP7P55210 303 aa7.4□□□□□ -1.23
PDE4D-202ENST00000317118 USPL1Q5W0Q7 1092 aa7.4□□□□□ -1.23
PDE4D-202ENST00000317118 DEFB132Q7Z7B7 95 aa7.4□□□□□ -1.23
PDE4D-202ENST00000317118 C9orf78Q9NZ63 289 aaPredicted RBP7.4□□□□□ -1.23
PDE4D-202ENST00000317118 TFCP2L1Q9NZI6 479 aa7.4□□□□□ -1.23
PDE4D-202ENST00000317118 COL24A1Q17RW2 1714 aa7.39□□□□□ -1.23
PDE4D-202ENST00000317118 ATP5J2-PTCD1G3V325 749 aa7.39□□□□□ -1.23
PDE4D-202ENST00000317118 NBPF7P0C2Y1 421 aaPredicted RBP7.39□□□□□ -1.23
PDE4D-202ENST00000317118 MTX1Q13505 466 aa7.39□□□□□ -1.23
PDE4D-202ENST00000317118 HDAC1Q13547 482 aaPredicted RBP7.39□□□□□ -1.23
PDE4D-202ENST00000317118 ZBTB38Q8NAP3 1195 aaPredicted RBP7.39□□□□□ -1.23
PDE4D-202ENST00000317118 PLA2G12BQ9BX93 195 aa7.39□□□□□ -1.23
PDE4D-202ENST00000317118 AFDNP55196 1824 aaKnown RBP7.39□□□□□ -1.23
PDE4D-202ENST00000317118 PNPLA7Q6ZV29 1317 aa7.39□□□□□ -1.23
PDE4D-202ENST00000317118 TUBGCP6Q96RT7 1819 aa7.39□□□□□ -1.23
PDE4D-202ENST00000317118 HSP90B1P14625 803 aaKnown RBP7.39□□□□□ -1.23
PDE4D-202ENST00000317118 PPP1R42Q7Z4L9 355 aa7.39□□□□□ -1.23
PDE4D-202ENST00000317118 ANKRD44Q8N8A2 993 aa7.39□□□□□ -1.23
PDE4D-202ENST00000317118 PKNOX2Q96KN3 472 aa7.39□□□□□ -1.23
PDE4D-202ENST00000317118 PCDHB15Q9Y5E8 787 aa7.39□□□□□ -1.23
PDE4D-202ENST00000317118 UBN2Q6ZU65 1347 aa7.39□□□□□ -1.23
PDE4D-202ENST00000317118 GYS1P13807 737 aa7.38□□□□□ -1.23
PDE4D-202ENST00000317118 TM4SF1P30408 202 aa7.38□□□□□ -1.23
PDE4D-202ENST00000317118 COL23A1Q86Y22 540 aaPredicted RBP7.38□□□□□ -1.23
PDE4D-202ENST00000317118 ANO8Q9HCE9 1232 aaPredicted RBP7.38□□□□□ -1.23
PDE4D-202ENST00000317118 SRP68Q9UHB9 627 aaKnown RBP7.38□□□□□ -1.23
PDE4D-202ENST00000317118 NIP7Q9Y221 180 aaKnown RBP eCLIP7.38□□□□□ -1.23
PDE4D-202ENST00000317118 PHF14O94880 888 aa7.38□□□□□ -1.23
PDE4D-202ENST00000317118 ATP8B2P98198 1209 aa7.38□□□□□ -1.23
PDE4D-202ENST00000317118 RABL6Q3YEC7 729 aaPredicted RBP7.38□□□□□ -1.23
PDE4D-202ENST00000317118 TBC1D9BQ66K14 1250 aa7.38□□□□□ -1.23
PDE4D-202ENST00000317118 CEP85Q6P2H3 762 aa7.38□□□□□ -1.23
PDE4D-202ENST00000317118 NLGN1Q8N2Q7 840 aa7.38□□□□□ -1.23
PDE4D-202ENST00000317118 UTP14AQ9BVJ6 771 aaKnown RBP7.38□□□□□ -1.23
PDE4D-202ENST00000317118 NYXQ9GZU5 481 aa7.38□□□□□ -1.23
PDE4D-202ENST00000317118 RWDD1Q9H446 243 aaPredicted RBP7.38□□□□□ -1.23
PDE4D-202ENST00000317118 RIC1Q4ADV7 1423 aa7.38□□□□□ -1.23
PDE4D-202ENST00000317118 CARMIL3Q8ND23 1372 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 ZBTB22O15209 634 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 NTSR2O95665 410 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 SLC10A5Q5PT55 438 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 SUSD4Q5VX71 490 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 SLC16A10Q8TF71 515 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 KAZALD1Q96I82 304 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 CCDC136Q96JN2 1154 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 SETDB2Q96T68 719 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 LRRFIP2Q9Y608 721 aaKnown RBP7.37□□□□□ -1.23
PDE4D-202ENST00000317118 GPTP24298 496 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 SUCLG2Q96I99 432 aa7.37□□□□□ -1.23
PDE4D-202ENST00000317118 TRMT112Q9UI30 125 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms