RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 IGSF1Q8N6C5 1336 aa7.44□□□□□ -1.22
SPATA9-202ENST00000316087 RAD50Q92878 1312 aa7.44□□□□□ -1.22
SPATA9-202ENST00000316087 PLEKHG1Q9ULL1 1385 aa7.44□□□□□ -1.22
SPATA9-202ENST00000316087 GLRX3O76003 335 aaKnown RBP7.43□□□□□ -1.22
SPATA9-202ENST00000316087 METP08581 1390 aa7.43□□□□□ -1.22
SPATA9-202ENST00000316087 ACEP12821 1306 aa7.43□□□□□ -1.22
SPATA9-202ENST00000316087 DHX8Q14562 1220 aaKnown RBP7.43□□□□□ -1.22
SPATA9-202ENST00000316087 AMHR2Q16671 573 aa7.43□□□□□ -1.22
SPATA9-202ENST00000316087 RILPL2Q969X0 211 aa7.43□□□□□ -1.22
SPATA9-202ENST00000316087 USP42Q9H9J4 1324 aaKnown RBP7.43□□□□□ -1.22
SPATA9-202ENST00000316087 ADGRL3Q9HAR2 1447 aa7.43□□□□□ -1.22
SPATA9-202ENST00000316087 TMEM2Q9UHN6 1383 aa7.43□□□□□ -1.22
SPATA9-202ENST00000316087 SMC3Q9UQE7 1217 aa7.43□□□□□ -1.22
SPATA9-202ENST00000316087 CHD2O14647 1828 aaKnown RBP7.43□□□□□ -1.22
SPATA9-202ENST00000316087 UBR1Q8IWV7 1749 aa7.43□□□□□ -1.22
SPATA9-202ENST00000316087 DIP2BQ9P265 1576 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 ANKARQ7Z5J8 1434 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 ELP1O95163 1332 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 GPR37O15354 613 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 SGSM2O43147 1006 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 STX6O43752 255 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 SMARCA5O60264 1052 aaPredicted RBP7.42□□□□□ -1.22
SPATA9-202ENST00000316087 CCDC192P0DO97 292 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 ZKSCAN1P17029 563 aaPredicted RBP7.42□□□□□ -1.22
SPATA9-202ENST00000316087 PSMA5P28066 241 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 PKP1Q13835 747 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 DCTN1Q14203 1278 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 TAF7Q15545 349 aaPredicted RBP7.42□□□□□ -1.22
SPATA9-202ENST00000316087 VPS53Q5VIR6 699 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 MCM10Q7L590 875 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 TXNDC2Q86VQ3 553 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 TICAM2Q86XR7 235 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 PEAK1Q9H792 1746 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 CRYBG1Q9Y4K1 1723 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 TNRQ92752 1358 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 RPAP1Q9BWH6 1393 aaPredicted RBP7.42□□□□□ -1.22
SPATA9-202ENST00000316087 IRX5P78411 483 aaPredicted RBP7.42□□□□□ -1.22
SPATA9-202ENST00000316087 XPCQ01831 940 aaPredicted RBP7.42□□□□□ -1.22
SPATA9-202ENST00000316087 RNF20Q5VTR2 975 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 USP48Q86UV5 1035 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 CCDC125Q86Z20 511 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 OTUD7AQ8TE49 926 aaPredicted RBP7.42□□□□□ -1.22
SPATA9-202ENST00000316087 CCDC94Q9BW85 323 aaPredicted RBP7.42□□□□□ -1.22
SPATA9-202ENST00000316087 SPTLC3Q9NUV7 552 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 FAM13BQ9NYF5 915 aa7.42□□□□□ -1.22
SPATA9-202ENST00000316087 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.42□□□□□ -1.22
SPATA9-202ENST00000316087 ZNF330Q9Y3S2 320 aaPredicted RBP7.42□□□□□ -1.22
SPATA9-202ENST00000316087 OVOS2A0A0G2JMS6 1433 aa7.41□□□□□ -1.22
SPATA9-202ENST00000316087 KDM4AO75164 1064 aa7.41□□□□□ -1.22
SPATA9-202ENST00000316087 F13A1P00488 732 aa7.41□□□□□ -1.22
SPATA9-202ENST00000316087 AMPHP49418 695 aa7.41□□□□□ -1.22
SPATA9-202ENST00000316087 NOLC1Q14978 699 aaKnown RBP eCLIP7.41□□□□□ -1.22
SPATA9-202ENST00000316087 SYCP1Q15431 976 aa7.41□□□□□ -1.22
SPATA9-202ENST00000316087 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.41□□□□□ -1.22
SPATA9-202ENST00000316087 PDCL2Q8N4E4 241 aa7.41□□□□□ -1.22
SPATA9-202ENST00000316087 SCAND2PQ9GZW5 306 aaPredicted RBP7.41□□□□□ -1.22
SPATA9-202ENST00000316087 ALDH8A1Q9H2A2 487 aaPredicted RBP7.41□□□□□ -1.22
SPATA9-202ENST00000316087 RBM27Q9P2N5 1060 aaKnown RBP7.41□□□□□ -1.22
SPATA9-202ENST00000316087 EXOC6BQ9Y2D4 811 aa7.41□□□□□ -1.22
SPATA9-202ENST00000316087 KIF3AQ9Y496 699 aa7.41□□□□□ -1.22
SPATA9-202ENST00000316087 CYP46A1Q9Y6A2 500 aa7.41□□□□□ -1.22
SPATA9-202ENST00000316087 NCAPD2Q15021 1401 aa7.4□□□□□ -1.22
SPATA9-202ENST00000316087 MAP3K19Q56UN5 1328 aa7.4□□□□□ -1.22
SPATA9-202ENST00000316087 KRT85P78386 507 aa7.4□□□□□ -1.22
SPATA9-202ENST00000316087 MTX1Q13505 466 aa7.4□□□□□ -1.22
SPATA9-202ENST00000316087 MTHFSDQ2M296 383 aaKnown RBP7.4□□□□□ -1.22
SPATA9-202ENST00000316087 UTP14CQ5TAP6 766 aaKnown RBP7.4□□□□□ -1.22
SPATA9-202ENST00000316087 CLASRPQ8N2M8 674 aaKnown RBP7.4□□□□□ -1.22
SPATA9-202ENST00000316087 RHPN1Q8TCX5 695 aa7.4□□□□□ -1.22
SPATA9-202ENST00000316087 KCNB2Q92953 911 aa7.4□□□□□ -1.22
SPATA9-202ENST00000316087 TMEM121BQ9BXQ6 578 aaPredicted RBP7.4□□□□□ -1.22
SPATA9-202ENST00000316087 OCEL1Q9H607 264 aa7.4□□□□□ -1.22
SPATA9-202ENST00000316087 EID1Q9Y6B2 187 aa7.4□□□□□ -1.22
SPATA9-202ENST00000316087 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.4□□□□□ -1.22
SPATA9-202ENST00000316087 PRR36Q9H6K5 1346 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 SNPHO15079 494 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 NEMFO60524 1076 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 ALDH1L1O75891 902 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 KRT32Q14532 448 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 MFSD10Q14728 455 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 HSP90AB2PQ58FF8 381 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 EVI5LQ96CN4 794 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 TTC14Q96N46 770 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 IGSF5Q9NSI5 407 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 DDX19AQ9NUU7 478 aaKnown RBP7.39□□□□□ -1.23
SPATA9-202ENST00000316087 HMG20BQ9P0W2 317 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 LRRFIP2Q9Y608 721 aaKnown RBP7.39□□□□□ -1.23
SPATA9-202ENST00000316087 SLIT1O75093 1534 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.39□□□□□ -1.23
SPATA9-202ENST00000316087 LMTK3Q96Q04 1460 aa7.39□□□□□ -1.23
SPATA9-202ENST00000316087 CEP170BQ9Y4F5 1589 aaPredicted RBP7.39□□□□□ -1.23
SPATA9-202ENST00000316087 GOLGA6L4A6NEF3 574 aa7.38□□□□□ -1.23
SPATA9-202ENST00000316087 IRF6O14896 467 aa7.38□□□□□ -1.23
SPATA9-202ENST00000316087 SURF6O75683 361 aaKnown RBP7.38□□□□□ -1.23
SPATA9-202ENST00000316087 ADCY5O95622 1261 aa7.38□□□□□ -1.23
SPATA9-202ENST00000316087 SYT1P21579 422 aa7.38□□□□□ -1.23
SPATA9-202ENST00000316087 FBLN1P23142 703 aa7.38□□□□□ -1.23
SPATA9-202ENST00000316087 HDGFL1Q5TGJ6 251 aa7.38□□□□□ -1.23
SPATA9-202ENST00000316087 RNF214Q8ND24 703 aa7.38□□□□□ -1.23
SPATA9-202ENST00000316087 FAM200AQ8TCP9 573 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms