RNA–Protein interactions for RNA: ENST00000315938.4

GDPD4-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GDPD4, Length 2,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4-201ENST00000315938 RTKN2Q8IZC4 609 aa8.84□□□□□ -0.99
GDPD4-201ENST00000315938 PNISRQ8TF01 805 aaKnown RBP8.84□□□□□ -0.99
GDPD4-201ENST00000315938 PHACTR3Q96KR7 559 aa8.84□□□□□ -0.99
GDPD4-201ENST00000315938 NPHP1O15259 732 aa8.84□□□□□ -0.99
GDPD4-201ENST00000315938 TPTE2Q6XPS3 522 aa8.84□□□□□ -0.99
GDPD4-201ENST00000315938 LDHDQ86WU2 507 aa8.84□□□□□ -0.99
GDPD4-201ENST00000315938 NBPF5PQ86XG9 351 aaPredicted RBP8.84□□□□□ -0.99
GDPD4-201ENST00000315938 SECISBP2LQ93073 1101 aaKnown RBP8.84□□□□□ -0.99
GDPD4-201ENST00000315938 PRDM16Q9HAZ2 1276 aa8.84□□□□□ -0.99
GDPD4-201ENST00000315938 KCNQ3O43525 872 aa8.83□□□□□ -1
GDPD4-201ENST00000315938 HSPA1AP0DMV8 641 aaKnown RBP8.83□□□□□ -1
GDPD4-201ENST00000315938 HSPA1BP0DMV9 641 aaKnown RBP8.83□□□□□ -1
GDPD4-201ENST00000315938 CC2D2BQ6DHV5 1058 aa8.83□□□□□ -1
GDPD4-201ENST00000315938 ZNF330Q9Y3S2 320 aaPredicted RBP8.83□□□□□ -1
GDPD4-201ENST00000315938 USP16Q9Y5T5 823 aa8.83□□□□□ -1
GDPD4-201ENST00000315938 THSD7BQ9C0I4 1608 aa8.83□□□□□ -1
GDPD4-201ENST00000315938 CHRM1P11229 460 aaPredicted RBP8.83□□□□□ -1
GDPD4-201ENST00000315938 PPP2R1AP30153 589 aa8.83□□□□□ -1
GDPD4-201ENST00000315938 ALDH1B1P30837 517 aa8.83□□□□□ -1
GDPD4-201ENST00000315938 TAF7Q15545 349 aaPredicted RBP8.83□□□□□ -1
GDPD4-201ENST00000315938 TNS4Q8IZW8 715 aa8.83□□□□□ -1
GDPD4-201ENST00000315938 NYXQ9GZU5 481 aa8.83□□□□□ -1
GDPD4-201ENST00000315938 PASKQ96RG2 1323 aa8.82□□□□□ -1
GDPD4-201ENST00000315938 ERVV-1B6SEH8 477 aa8.82□□□□□ -1
GDPD4-201ENST00000315938 COL13A1Q5TAT6 717 aaPredicted RBP8.82□□□□□ -1
GDPD4-201ENST00000315938 CHMP4BQ9H444 224 aaKnown RBP8.82□□□□□ -1
GDPD4-201ENST00000315938 SNED1Q8TER0 1413 aa8.82□□□□□ -1
GDPD4-201ENST00000315938 CNTNAP1P78357 1384 aa8.82□□□□□ -1
GDPD4-201ENST00000315938 U2AF1L5P0DN76 240 aaPredicted RBP8.82□□□□□ -1
GDPD4-201ENST00000315938 U2AF1Q01081 240 aaKnown RBP eCLIP8.82□□□□□ -1
GDPD4-201ENST00000315938 ERBB4Q15303 1308 aa8.81□□□□□ -1
GDPD4-201ENST00000315938 LAMB2P55268 1798 aa8.81□□□□□ -1
GDPD4-201ENST00000315938 IPO4Q8TEX9 1081 aaKnown RBP8.81□□□□□ -1
GDPD4-201ENST00000315938 TAF1DQ9H5J8 278 aaPredicted RBP8.81□□□□□ -1
GDPD4-201ENST00000315938 ZNF219Q9P2Y4 722 aaPredicted RBP8.81□□□□□ -1
GDPD4-201ENST00000315938 NIP7Q9Y221 180 aaKnown RBP eCLIP8.81□□□□□ -1
GDPD4-201ENST00000315938 NBPF26B4DH59 902 aa8.81□□□□□ -1
GDPD4-201ENST00000315938 DDNO94850 711 aaPredicted RBP8.81□□□□□ -1
GDPD4-201ENST00000315938 NBPF10Q6P3W6 841 aaKnown RBP8.81□□□□□ -1
GDPD4-201ENST00000315938 NBPF15Q8N660 670 aa8.81□□□□□ -1
GDPD4-201ENST00000315938 PNNQ9H307 717 aaKnown RBP8.81□□□□□ -1
GDPD4-201ENST00000315938 NEFMP07197 916 aa8.8□□□□□ -1
GDPD4-201ENST00000315938 IARSP41252 1262 aaKnown RBP8.8□□□□□ -1
GDPD4-201ENST00000315938 WWC1Q8IX03 1113 aa8.8□□□□□ -1
GDPD4-201ENST00000315938 CCDC24Q8N4L8 307 aa8.8□□□□□ -1
GDPD4-201ENST00000315938 HACL1Q9UJ83 578 aa8.8□□□□□ -1
GDPD4-201ENST00000315938 FZD9O00144 591 aa8.8□□□□□ -1
GDPD4-201ENST00000315938 CRY2Q49AN0 593 aa8.8□□□□□ -1
GDPD4-201ENST00000315938 MCM10Q7L590 875 aa8.8□□□□□ -1
GDPD4-201ENST00000315938 PNMA8AQ86V59 439 aaPredicted RBP8.8□□□□□ -1
GDPD4-201ENST00000315938 HOXA10P31260 410 aaPredicted RBP8.79□□□□□ -1
GDPD4-201ENST00000315938 SYNE4Q8N205 404 aa8.79□□□□□ -1
GDPD4-201ENST00000315938 VPS33BQ9H267 617 aa8.79□□□□□ -1
GDPD4-201ENST00000315938 MAP3K15Q6ZN16 1313 aa8.79□□□□□ -1
GDPD4-201ENST00000315938 KIF6Q6ZMV9 814 aa8.79□□□□□ -1
GDPD4-201ENST00000315938 CRAMP1Q96RY5 1269 aa8.79□□□□□ -1
GDPD4-201ENST00000315938 C1orf115Q9H7X2 142 aa8.79□□□□□ -1
GDPD4-201ENST00000315938 PRAMEF22A3QJZ6 481 aa8.78□□□□□ -1
GDPD4-201ENST00000315938 TMEM88BA6NKF7 163 aa8.78□□□□□ -1
GDPD4-201ENST00000315938 GPC2Q8N158 579 aa8.78□□□□□ -1
GDPD4-201ENST00000315938 PLCD4Q9BRC7 762 aa8.78□□□□□ -1
GDPD4-201ENST00000315938 BABAM1Q9NWV8 329 aa8.78□□□□□ -1
GDPD4-201ENST00000315938 RNF123Q5XPI4 1314 aa8.78□□□□□ -1
GDPD4-201ENST00000315938 ZNF541Q9H0D2 1346 aa8.78□□□□□ -1
GDPD4-201ENST00000315938 LTBP1Q14766 1721 aa8.78□□□□□ -1
GDPD4-201ENST00000315938 DDX60Q8IY21 1712 aaKnown RBP8.78□□□□□ -1
GDPD4-201ENST00000315938 ITGBL1O95965 494 aaPredicted RBP8.78□□□□□ -1
GDPD4-201ENST00000315938 EPHX2P34913 555 aa8.78□□□□□ -1
GDPD4-201ENST00000315938 NFE2L2Q16236 605 aa8.78□□□□□ -1
GDPD4-201ENST00000315938 GOLGB1Q14789 3259 aaKnown RBP8.77□□□□□ -1
GDPD4-201ENST00000315938 NPM3O75607 178 aaKnown RBP8.77□□□□□ -1.01
GDPD4-201ENST00000315938 GTF2E1P29083 439 aaPredicted RBP8.77□□□□□ -1.01
GDPD4-201ENST00000315938 CTCFP49711 727 aaPredicted RBP8.77□□□□□ -1.01
GDPD4-201ENST00000315938 EIF4A1P60842 406 aaKnown RBP8.77□□□□□ -1.01
GDPD4-201ENST00000315938 HLFQ16534 295 aa8.77□□□□□ -1.01
GDPD4-201ENST00000315938 AIDAQ96BJ3 306 aa8.77□□□□□ -1.01
GDPD4-201ENST00000315938 RBM17Q96I25 401 aaKnown RBP8.77□□□□□ -1.01
GDPD4-201ENST00000315938 TSHZ2Q9NRE2 1034 aa8.77□□□□□ -1.01
GDPD4-201ENST00000315938 ZNF277Q9NRM2 450 aaPredicted RBP8.77□□□□□ -1.01
GDPD4-201ENST00000315938 RNF216Q9NWF9 866 aaPredicted RBP8.77□□□□□ -1.01
GDPD4-201ENST00000315938 LRRC37AA6NMS7 1700 aa8.77□□□□□ -1.01
GDPD4-201ENST00000315938 ABCC12Q96J65 1359 aa8.77□□□□□ -1.01
GDPD4-201ENST00000315938 RASSF10A6NK89 507 aa8.77□□□□□ -1.01
GDPD4-201ENST00000315938 PIP4K2AP48426 406 aaPredicted RBP8.77□□□□□ -1.01
GDPD4-201ENST00000315938 EIF6P56537 245 aaKnown RBP8.77□□□□□ -1.01
GDPD4-201ENST00000315938 PARP10Q53GL7 1025 aa8.77□□□□□ -1.01
GDPD4-201ENST00000315938 KCNG1Q9UIX4 513 aa8.77□□□□□ -1.01
GDPD4-201ENST00000315938 CEP350Q5VT06 3117 aa8.76□□□□□ -1.01
GDPD4-201ENST00000315938 RAD21O60216 631 aa8.76□□□□□ -1.01
GDPD4-201ENST00000315938 POTEIP0CG38 1075 aa8.76□□□□□ -1.01
GDPD4-201ENST00000315938 POTEJP0CG39 1038 aa8.76□□□□□ -1.01
GDPD4-201ENST00000315938 DCTN1Q14203 1278 aa8.76□□□□□ -1.01
GDPD4-201ENST00000315938 ZNF34Q8IZ26 560 aa8.76□□□□□ -1.01
GDPD4-201ENST00000315938 FAM177A1Q8N128 213 aaPredicted RBP8.76□□□□□ -1.01
GDPD4-201ENST00000315938 JDP2Q8WYK2 163 aa8.76□□□□□ -1.01
GDPD4-201ENST00000315938 RPGRQ92834 1020 aaKnown RBP8.76□□□□□ -1.01
GDPD4-201ENST00000315938 PLEKHF1Q96S99 279 aa8.76□□□□□ -1.01
GDPD4-201ENST00000315938 MKRN1Q9UHC7 482 aaKnown RBP8.76□□□□□ -1.01
GDPD4-201ENST00000315938 SLC10A5Q5PT55 438 aa8.76□□□□□ -1.01
GDPD4-201ENST00000315938 LMOD1P29536 600 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms