RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.59□□□□□ -0.712e-7■■■□□ 15.1
CTC1-201ENST00000315684 KIAA0232Q92628 1395 aa10.59□□□□□ -0.71
CTC1-201ENST00000315684 DPY19L2Q6NUT2 758 aa10.59□□□□□ -0.71
CTC1-201ENST00000315684 MAGEB6Q8N7X4 407 aa10.59□□□□□ -0.71
CTC1-201ENST00000315684 MEIS3Q99687 375 aa10.59□□□□□ -0.71
CTC1-201ENST00000315684 TARBP1Q13395 1621 aaKnown RBP10.58□□□□□ -0.71
CTC1-201ENST00000315684 PDE4BQ07343 736 aa10.58□□□□□ -0.71
CTC1-201ENST00000315684 MAGEC2Q9UBF1 373 aaPredicted RBP10.58□□□□□ -0.71
CTC1-201ENST00000315684 TRIM27P14373 513 aa10.58□□□□□ -0.72
CTC1-201ENST00000315684 NLRP5P59047 1200 aa10.58□□□□□ -0.72
CTC1-201ENST00000315684 CARD14Q9BXL6 1004 aa10.58□□□□□ -0.72
CTC1-201ENST00000315684 CFAP74Q9C0B2 1584 aa10.58□□□□□ -0.72
CTC1-201ENST00000315684 SBNO2Q9Y2G9 1366 aa10.58□□□□□ -0.72
CTC1-201ENST00000315684 PPP4R3AQ6IN85 833 aa10.58□□□□□ -0.72
CTC1-201ENST00000315684 GGA1Q9UJY5 639 aa10.58□□□□□ -0.72
CTC1-201ENST00000315684 DDX11L8A8MPP1 907 aa10.58□□□□□ -0.72
CTC1-201ENST00000315684 EN1Q05925 392 aaPredicted RBP10.58□□□□□ -0.72
CTC1-201ENST00000315684 LARP1BQ659C4 914 aaKnown RBP10.58□□□□□ -0.72
CTC1-201ENST00000315684 CT47B1P0C2W7 299 aaPredicted RBP10.58□□□□□ -0.72
CTC1-201ENST00000315684 CATIPQ7Z7H3 387 aa10.58□□□□□ -0.72
CTC1-201ENST00000315684 TSPYL6Q8N831 410 aa10.58□□□□□ -0.72
CTC1-201ENST00000315684 UPF3BQ9BZI7 483 aaKnown RBP10.58□□□□□ -0.72
CTC1-201ENST00000315684 NEO1Q92859 1461 aa10.58□□□□□ -0.72
CTC1-201ENST00000315684 LDHBP07195 334 aaKnown RBP10.57□□□□□ -0.72
CTC1-201ENST00000315684 KSR2Q6VAB6 950 aa10.57□□□□□ -0.72
CTC1-201ENST00000315684 FAM196AQ6ZSG2 479 aa10.57□□□□□ -0.72
CTC1-201ENST00000315684 MAST1Q9Y2H9 1570 aa10.57□□□□□ -0.72
CTC1-201ENST00000315684 TTF1Q15361 905 aaPredicted RBP10.57□□□□□ -0.72
CTC1-201ENST00000315684 TMEM67Q5HYA8 995 aa10.57□□□□□ -0.72
CTC1-201ENST00000315684 PICK1Q9NRD5 415 aa10.57□□□□□ -0.72
CTC1-201ENST00000315684 MFSD6Q6ZSS7 791 aa10.57□□□□□ -0.72
CTC1-201ENST00000315684 CCDC83Q8IWF9 413 aa10.57□□□□□ -0.72
CTC1-201ENST00000315684 MCM9Q9NXL9 1143 aa10.57□□□□□ -0.72
CTC1-201ENST00000315684 MICU3Q86XE3 530 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 LRRC2Q9BYS8 371 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 BICC1Q9H694 974 aaKnown RBP10.56□□□□□ -0.72
CTC1-201ENST00000315684 PTPRCP08575 1304 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 COL17A1Q9UMD9 1497 aaPredicted RBP10.56□□□□□ -0.72
CTC1-201ENST00000315684 MAGEB6P1A0A0J9YX57 407 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 GOLGA8AA7E2F4 631 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 GOLGA8BA8MQT2 603 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 ITGA6P23229 1130 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 SLC52A2Q9HAB3 445 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 SLC9C2Q5TAH2 1124 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 KLHDC4Q8TBB5 520 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 ZNF396Q96N95 335 aaPredicted RBP10.56□□□□□ -0.72
CTC1-201ENST00000315684 PRAG1Q86YV5 1406 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 NSD2O96028 1365 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 CDKL5O76039 1030 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 TNNI2P48788 182 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 ALDH1L2Q3SY69 923 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 RNF214Q8ND24 703 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 ZBTB21Q9ULJ3 1066 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 METP08581 1390 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 KINO60870 393 aaKnown RBP10.56□□□□□ -0.72
CTC1-201ENST00000315684 TFCP2Q12800 502 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 USPL1Q5W0Q7 1092 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 PKD2L1Q9P0L9 805 aa10.56□□□□□ -0.72
CTC1-201ENST00000315684 FERMT3Q86UX7 667 aa10.55□□□□□ -0.72
CTC1-201ENST00000315684 UNC5CLQ8IV45 518 aa10.55□□□□□ -0.72
CTC1-201ENST00000315684 ASAP1Q9ULH1 1129 aa10.55□□□□□ -0.72
CTC1-201ENST00000315684 SMC2O95347 1197 aa10.55□□□□□ -0.72
CTC1-201ENST00000315684 ANKRD1Q15327 319 aa10.55□□□□□ -0.72
CTC1-201ENST00000315684 PODXL2Q9NZ53 605 aa10.55□□□□□ -0.72
CTC1-201ENST00000315684 H7C1D1 291 aa10.55□□□□□ -0.72
CTC1-201ENST00000315684 FNBP4Q8N3X1 1017 aaPredicted RBP10.55□□□□□ -0.72
CTC1-201ENST00000315684 ZGPATQ8N5A5 531 aaKnown RBP10.55□□□□□ -0.72
CTC1-201ENST00000315684 UQCRFS1P1P0C7P4 283 aa10.54□□□□□ -0.72
CTC1-201ENST00000315684 SKIDA1Q1XH10 827 aa10.54□□□□□ -0.72
CTC1-201ENST00000315684 BMP2KQ9NSY1 1161 aaPredicted RBP10.54□□□□□ -0.72
CTC1-201ENST00000315684 EP400NLQ6ZTU2 488 aa10.54□□□□□ -0.72
CTC1-201ENST00000315684 MPNDQ8N594 471 aa10.54□□□□□ -0.72
CTC1-201ENST00000315684 DRC1Q96MC2 740 aa10.54□□□□□ -0.72
CTC1-201ENST00000315684 KCNQ3O43525 872 aa10.54□□□□□ -0.72
CTC1-201ENST00000315684 CHST3Q7LGC8 479 aa10.54□□□□□ -0.72
CTC1-201ENST00000315684 ABT1Q9ULW3 272 aaKnown RBP10.54□□□□□ -0.72
CTC1-201ENST00000315684 PRPF40AO75400 957 aaKnown RBP10.54□□□□□ -0.72
CTC1-201ENST00000315684 TCIRG1Q13488 830 aa10.54□□□□□ -0.72
CTC1-201ENST00000315684 SSRP1Q08945 709 aaKnown RBP10.54□□□□□ -0.72
CTC1-201ENST00000315684 ANKRD2Q9GZV1 360 aa10.54□□□□□ -0.72
CTC1-201ENST00000315684 MAP3K1Q13233 1512 aa10.54□□□□□ -0.72
CTC1-201ENST00000315684 RNF41Q9H4P4 317 aaPredicted RBP10.53□□□□□ -0.72
CTC1-201ENST00000315684 ABCC11Q96J66 1382 aa10.53□□□□□ -0.72
CTC1-201ENST00000315684 PDE6BP35913 854 aa10.53□□□□□ -0.72
CTC1-201ENST00000315684 SCNN1DP51172 638 aa10.53□□□□□ -0.72
CTC1-201ENST00000315684 HEATR3Q7Z4Q2 680 aa10.53□□□□□ -0.72
CTC1-201ENST00000315684 SSR1P43307 286 aaKnown RBP10.53□□□□□ -0.72
CTC1-201ENST00000315684 BRINP3Q76B58 766 aa10.53□□□□□ -0.72
CTC1-201ENST00000315684 UIMC1Q96RL1 719 aa10.53□□□□□ -0.72
CTC1-201ENST00000315684 ZKSCAN3Q9BRR0 538 aa10.53□□□□□ -0.72
CTC1-201ENST00000315684 DEKP35659 375 aaKnown RBP10.53□□□□□ -0.72
CTC1-201ENST00000315684 G2E3Q7L622 706 aa10.53□□□□□ -0.72
CTC1-201ENST00000315684 TCP10L2B9ZVM9 353 aa10.52□□□□□ -0.72
CTC1-201ENST00000315684 GTF2IP78347 998 aa10.52□□□□□ -0.72
CTC1-201ENST00000315684 MAP3K9P80192 1104 aa10.52□□□□□ -0.72
CTC1-201ENST00000315684 EHMT1Q9H9B1 1298 aa10.52□□□□□ -0.72
CTC1-201ENST00000315684 HIBADHP31937 336 aaKnown RBP10.52□□□□□ -0.72
CTC1-201ENST00000315684 ECHDC1Q9NTX5 307 aa10.52□□□□□ -0.72
CTC1-201ENST00000315684 CSPG5O95196 566 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms