RNA–Protein interactions for RNA: ENST00000315480.8

USP20-201, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-201ENST00000315480 ANKRD2Q9GZV1 360 aa15.15■□□□□ 0.02
USP20-201ENST00000315480 LIMCH1Q9UPQ0 1083 aa15.15■□□□□ 0.02
USP20-201ENST00000315480 NUP62CLQ9H1M0 184 aa15.15■□□□□ 0.02
USP20-201ENST00000315480 CLEC11AQ9Y240 323 aa15.15■□□□□ 0.02
USP20-201ENST00000315480 CTTNBP2Q8WZ74 1663 aa15.15■□□□□ 0.02
USP20-201ENST00000315480 NOM1Q5C9Z4 860 aaKnown RBP15.15■□□□□ 0.02
USP20-201ENST00000315480 TMEM67Q5HYA8 995 aa15.15■□□□□ 0.02
USP20-201ENST00000315480 NCOA7Q8NI08 942 aa15.15■□□□□ 0.02
USP20-201ENST00000315480 CYP7A1P22680 504 aa15.14■□□□□ 0.01
USP20-201ENST00000315480 PARP10Q53GL7 1025 aa15.14■□□□□ 0.01
USP20-201ENST00000315480 NAA16Q6N069 864 aaPredicted RBP15.14■□□□□ 0.01
USP20-201ENST00000315480 TMTC2Q8N394 836 aa15.14■□□□□ 0.01
USP20-201ENST00000315480 JARID2Q92833 1246 aaPredicted RBP15.14■□□□□ 0.01
USP20-201ENST00000315480 CCNL1Q9UK58 526 aaPredicted RBP15.14■□□□□ 0.01
USP20-201ENST00000315480 GNPATO15228 680 aa15.14■□□□□ 0.01
USP20-201ENST00000315480 IARSP41252 1262 aaKnown RBP15.14■□□□□ 0.01
USP20-201ENST00000315480 BABAM1Q9NWV8 329 aa15.14■□□□□ 0.01
USP20-201ENST00000315480 STX8Q9UNK0 236 aa15.14■□□□□ 0.01
USP20-201ENST00000315480 RNMTO43148 476 aaKnown RBP15.14■□□□□ 0.01
USP20-201ENST00000315480 DDX21Q9NR30 783 aaKnown RBP eCLIP15.14■□□□□ 0.01
USP20-201ENST00000315480 TTLL5Q6EMB2 1281 aa15.13■□□□□ 0.01
USP20-201ENST00000315480 TESK2Q96S53 571 aa15.13■□□□□ 0.01
USP20-201ENST00000315480 SMTNL1A8MU46 457 aa15.13■□□□□ 0.01
USP20-201ENST00000315480 IRS4O14654 1257 aaPredicted RBP15.13■□□□□ 0.01
USP20-201ENST00000315480 POTEJP0CG39 1038 aa15.13■□□□□ 0.01
USP20-201ENST00000315480 BMP2KLQ5H9B9 411 aa15.13■□□□□ 0.01
USP20-201ENST00000315480 GNAQP50148 359 aa15.13■□□□□ 0.01
USP20-201ENST00000315480 CHMP4BP1P59074 171 aa15.13■□□□□ 0.01
USP20-201ENST00000315480 FERMT3Q86UX7 667 aa15.13■□□□□ 0.01
USP20-201ENST00000315480 HSP90B2PQ58FF3 399 aa15.13■□□□□ 0.01
USP20-201ENST00000315480 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.13■□□□□ 0.01
USP20-201ENST00000315480 TMEM2Q9UHN6 1383 aa15.13■□□□□ 0.01
USP20-201ENST00000315480 ESR2Q92731 530 aa15.12■□□□□ 0.01
USP20-201ENST00000315480 MEIS3Q99687 375 aa15.12■□□□□ 0.01
USP20-201ENST00000315480 PODXL2Q9NZ53 605 aa15.12■□□□□ 0.01
USP20-201ENST00000315480 EIF2AK4Q9P2K8 1649 aaKnown RBP15.12■□□□□ 0.01
USP20-201ENST00000315480 C20orf194Q5TEA3 1177 aa15.12■□□□□ 0.01
USP20-201ENST00000315480 KRT23Q9C075 422 aa15.12■□□□□ 0.01
USP20-201ENST00000315480 USP16Q9Y5T5 823 aa15.12■□□□□ 0.01
USP20-201ENST00000315480 ATP8B2P98198 1209 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 C8orf58Q8NAV2 365 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 CNNM2Q9H8M5 875 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 ATP7AQ04656 1500 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 DISP1Q96F81 1524 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 A0A1W2PP64 1363 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 ANKRD44Q8N8A2 993 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 ERCC4Q92889 916 aaPredicted RBP15.11■□□□□ 0.01
USP20-201ENST00000315480 NBPF7P0C2Y1 421 aaPredicted RBP15.11■□□□□ 0.01
USP20-201ENST00000315480 BAG6P46379 1132 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 CNBD1Q8NA66 436 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 TCP11L1Q9NUJ3 509 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 CEP170Q5SW79 1584 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 SBNO1A3KN83 1393 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 MCM5P33992 734 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 NEK1Q96PY6 1258 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 KIF21AQ7Z4S6 1674 aa15.11■□□□□ 0.01
USP20-201ENST00000315480 B4DLN1 442 aa15.1■□□□□ 0.01
USP20-201ENST00000315480 FGFR1OPO95684 399 aaKnown RBP15.1■□□□□ 0.01
USP20-201ENST00000315480 MRPL12P52815 198 aaKnown RBP15.1■□□□□ 0.01
USP20-201ENST00000315480 SH3TC1Q8TE82 1336 aa15.1■□□□□ 0.01
USP20-201ENST00000315480 HOXB7P09629 217 aa15.1■□□□□ 0.01
USP20-201ENST00000315480 EIF5P55010 431 aaKnown RBP15.1■□□□□ 0.01
USP20-201ENST00000315480 USP21Q9UK80 565 aa15.1■□□□□ 0.01
USP20-201ENST00000315480 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
USP20-201ENST00000315480 C16orf71Q8IYS4 520 aaPredicted RBP15.09■□□□□ 0.01
USP20-201ENST00000315480 TSG101Q99816 390 aa15.09■□□□□ 0.01
USP20-201ENST00000315480 IBSPP21815 317 aaPredicted RBP15.09■□□□□ 0.01
USP20-201ENST00000315480 LMOD1P29536 600 aaPredicted RBP15.09■□□□□ 0.01
USP20-201ENST00000315480 VAT1LQ9HCJ6 419 aa15.09■□□□□ 0.01
USP20-201ENST00000315480 IQSEC3Q9UPP2 1182 aaPredicted RBP15.09■□□□□ 0.01
USP20-201ENST00000315480 EDC4Q6P2E9 1401 aaKnown RBP15.09■□□□□ 0.01
USP20-201ENST00000315480 PLEKHG3A1L390 1219 aa15.09■□□□□ 0.01
USP20-201ENST00000315480 RRP9O43818 475 aaKnown RBP15.09■□□□□ 0.01
USP20-201ENST00000315480 PIK3C2GO75747 1445 aa15.09■□□□□ 0.01
USP20-201ENST00000315480 F8W031 263 aaPredicted RBP15.09■□□□□ 0.01
USP20-201ENST00000315480 TSPY3P0CV98 308 aa15.09■□□□□ 0.01
USP20-201ENST00000315480 TSPY8P0CW00 308 aa15.09■□□□□ 0.01
USP20-201ENST00000315480 TNNT3P45378 269 aaPredicted RBP15.09■□□□□ 0.01
USP20-201ENST00000315480 HAND2P61296 217 aa15.09■□□□□ 0.01
USP20-201ENST00000315480 WTAPQ15007 396 aa15.09■□□□□ 0.01
USP20-201ENST00000315480 ZNF790Q6PG37 636 aa15.09■□□□□ 0.01
USP20-201ENST00000315480 PYM1Q9BRP8 204 aaKnown RBP15.09■□□□□ 0.01
USP20-201ENST00000315480 ORC3Q9UBD5 711 aaPredicted RBP15.09■□□□□ 0.01
USP20-201ENST00000315480 MAP3K11Q16584 847 aa15.08■□□□□ 0.01
USP20-201ENST00000315480 TEX35Q5T0J7 233 aa15.08■□□□□ 0.01
USP20-201ENST00000315480 SLC9C2Q5TAH2 1124 aa15.08■□□□□ 0.01
USP20-201ENST00000315480 MICU3Q86XE3 530 aa15.08■□□□□ 0.01
USP20-201ENST00000315480 RBM17Q96I25 401 aaKnown RBP15.08■□□□□ 0.01
USP20-201ENST00000315480 ERLIN2O94905 339 aa15.08■□□□□ 0
USP20-201ENST00000315480 GNAT2P19087 354 aa15.08■□□□□ 0
USP20-201ENST00000315480 CETN2P41208 172 aa15.08■□□□□ 0
USP20-201ENST00000315480 METAP2P50579 478 aaKnown RBP eCLIP15.08■□□□□ 09e-6■■■■□ 23.9
USP20-201ENST00000315480 HDAC1Q13547 482 aaPredicted RBP15.08■□□□□ 0
USP20-201ENST00000315480 SLC4A4Q9Y6R1 1079 aa15.08■□□□□ 0
USP20-201ENST00000315480 FAM98CQ17RN3 349 aaKnown RBP15.07■□□□□ 0
USP20-201ENST00000315480 STXBP4Q6ZWJ1 553 aa15.07■□□□□ 0
USP20-201ENST00000315480 MRPL50Q8N5N7 158 aaKnown RBP15.07■□□□□ 0
USP20-201ENST00000315480 UBA7P41226 1012 aa15.07■□□□□ 0
USP20-201ENST00000315480 TNNI2P48788 182 aa15.07■□□□□ 0
USP20-201ENST00000315480 AMPD3Q01432 767 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms