RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
NPAS4-201ENST00000311034 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
NPAS4-201ENST00000311034 DNAJC25Q9H1X3 360 aa16.07■□□□□ 0.16
NPAS4-201ENST00000311034 RBM8AQ9Y5S9 174 aaKnown RBP16.07■□□□□ 0.16
NPAS4-201ENST00000311034 LTKP29376 864 aa16.07■□□□□ 0.16
NPAS4-201ENST00000311034 ISM2Q6H9L7 571 aa16.07■□□□□ 0.16
NPAS4-201ENST00000311034 IL17REQ8NFR9 667 aa16.07■□□□□ 0.16
NPAS4-201ENST00000311034 PODXL2Q9NZ53 605 aa16.07■□□□□ 0.16
NPAS4-201ENST00000311034 TPCN1Q9ULQ1 816 aa16.07■□□□□ 0.16
NPAS4-201ENST00000311034 GLRX3O76003 335 aaKnown RBP16.06■□□□□ 0.16
NPAS4-201ENST00000311034 SPTLC3Q9NUV7 552 aa16.06■□□□□ 0.16
NPAS4-201ENST00000311034 A2ML1A8K2U0 1454 aa16.06■□□□□ 0.16
NPAS4-201ENST00000311034 GPATCH3Q96I76 525 aa16.06■□□□□ 0.16
NPAS4-201ENST00000311034 SLFNL1Q499Z3 407 aa16.06■□□□□ 0.16
NPAS4-201ENST00000311034 CBX8Q9HC52 389 aa16.06■□□□□ 0.16
NPAS4-201ENST00000311034 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
NPAS4-201ENST00000311034 FILIP1Q7Z7B0 1213 aa16.05■□□□□ 0.16
NPAS4-201ENST00000311034 MAP3K2Q9Y2U5 619 aa16.05■□□□□ 0.16
NPAS4-201ENST00000311034 MRVI1Q9Y6F6 885 aa16.05■□□□□ 0.16
NPAS4-201ENST00000311034 CCT2P78371 535 aaKnown RBP16.04■□□□□ 0.16
NPAS4-201ENST00000311034 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
NPAS4-201ENST00000311034 DDX17Q92841 729 aaKnown RBP16.04■□□□□ 0.16
NPAS4-201ENST00000311034 TRMT1Q9NXH9 659 aaKnown RBP16.04■□□□□ 0.16
NPAS4-201ENST00000311034 CLIP2Q9UDT6 1046 aa16.04■□□□□ 0.16
NPAS4-201ENST00000311034 GOLGA6L19H0YKK7 550 aa16.04■□□□□ 0.16
NPAS4-201ENST00000311034 HSP90AB3PQ58FF7 597 aa16.04■□□□□ 0.16
NPAS4-201ENST00000311034 LARP1Q6PKG0 1096 aaKnown RBP16.04■□□□□ 0.16
NPAS4-201ENST00000311034 BLOC1S2Q6QNY1 142 aa16.04■□□□□ 0.16
NPAS4-201ENST00000311034 TPM3P06753 285 aa16.04■□□□□ 0.16
NPAS4-201ENST00000311034 ZNF165P49910 485 aa16.04■□□□□ 0.16
NPAS4-201ENST00000311034 CCDC112Q8NEF3 446 aa16.04■□□□□ 0.16
NPAS4-201ENST00000311034 ZSCAN31Q96LW9 406 aaPredicted RBP16.04■□□□□ 0.16
NPAS4-201ENST00000311034 FUCA2Q9BTY2 467 aa16.04■□□□□ 0.16
NPAS4-201ENST00000311034 NMIQ13287 307 aaPredicted RBP16.03■□□□□ 0.16
NPAS4-201ENST00000311034 CREB3L3Q68CJ9 461 aa16.03■□□□□ 0.16
NPAS4-201ENST00000311034 ECHDC1Q9NTX5 307 aa16.03■□□□□ 0.16
NPAS4-201ENST00000311034 SETD1BQ9UPS6 1966 aaKnown RBP16.03■□□□□ 0.16
NPAS4-201ENST00000311034 VPS53Q5VIR6 699 aa16.03■□□□□ 0.16
NPAS4-201ENST00000311034 CCDC129Q6ZRS4 1044 aa16.03■□□□□ 0.16
NPAS4-201ENST00000311034 CREBRFQ8IUR6 639 aa16.03■□□□□ 0.16
NPAS4-201ENST00000311034 SH2B1Q9NRF2 756 aaPredicted RBP16.03■□□□□ 0.16
NPAS4-201ENST00000311034 ZRSR1Q15695 479 aaKnown RBP16.02■□□□□ 0.16
NPAS4-201ENST00000311034 CABLES1Q8TDN4 633 aa16.02■□□□□ 0.16
NPAS4-201ENST00000311034 RIMS1Q86UR5 1692 aaKnown RBP16.02■□□□□ 0.16
NPAS4-201ENST00000311034 PROSER3Q2NL68 480 aa16.02■□□□□ 0.16
NPAS4-201ENST00000311034 SNRKQ9NRH2 765 aa16.02■□□□□ 0.16
NPAS4-201ENST00000311034 ROBO2Q9HCK4 1378 aa16.02■□□□□ 0.15
NPAS4-201ENST00000311034 GTF2F1P35269 517 aaKnown RBP eCLIP16.02■□□□□ 0.15
NPAS4-201ENST00000311034 HSP90AB4PQ58FF6 505 aa16.02■□□□□ 0.15
NPAS4-201ENST00000311034 TAF6LQ9Y6J9 622 aa16.02■□□□□ 0.15
NPAS4-201ENST00000311034 AOX1Q06278 1338 aa16.01■□□□□ 0.15
NPAS4-201ENST00000311034 NR1I2O75469 434 aa16.01■□□□□ 0.15
NPAS4-201ENST00000311034 ST3GAL1Q11201 340 aa16.01■□□□□ 0.15
NPAS4-201ENST00000311034 ARID5BQ14865 1188 aa16.01■□□□□ 0.15
NPAS4-201ENST00000311034 GORABQ5T7V8 394 aa16.01■□□□□ 0.15
NPAS4-201ENST00000311034 BECN2A8MW95 431 aa16.01■□□□□ 0.15
NPAS4-201ENST00000311034 JAK2O60674 1132 aa16.01■□□□□ 0.15
NPAS4-201ENST00000311034 ATP2B1P20020 1258 aa16.01■□□□□ 0.15
NPAS4-201ENST00000311034 CCDC171Q6TFL3 1326 aa16.01■□□□□ 0.15
NPAS4-201ENST00000311034 HSP90AA4PQ58FG1 418 aa16.01■□□□□ 0.15
NPAS4-201ENST00000311034 DDX46Q7L014 1031 aaKnown RBP16.01■□□□□ 0.15
NPAS4-201ENST00000311034 FLT4P35916 1363 aa16■□□□□ 0.15
NPAS4-201ENST00000311034 CHRNA2Q15822 529 aa16■□□□□ 0.15
NPAS4-201ENST00000311034 ZSWIM6Q9HCJ5 1215 aa16■□□□□ 0.15
NPAS4-201ENST00000311034 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
NPAS4-201ENST00000311034 KAT6BQ8WYB5 2073 aa16■□□□□ 0.15
NPAS4-201ENST00000311034 PDCP20941 246 aa15.99■□□□□ 0.15
NPAS4-201ENST00000311034 NCBP1Q09161 790 aaKnown RBP15.99■□□□□ 0.15
NPAS4-201ENST00000311034 ZSCAN25Q6NSZ9 544 aa15.99■□□□□ 0.15
NPAS4-201ENST00000311034 TOMM22Q9NS69 142 aa15.99■□□□□ 0.15
NPAS4-201ENST00000311034 ZNF75DP51815 510 aa15.99■□□□□ 0.15
NPAS4-201ENST00000311034 SLC27A2O14975 620 aa15.99■□□□□ 0.15
NPAS4-201ENST00000311034 KCNA6P17658 529 aa15.99■□□□□ 0.15
NPAS4-201ENST00000311034 PSMA5P28066 241 aa15.99■□□□□ 0.15
NPAS4-201ENST00000311034 HAND2P61296 217 aa15.99■□□□□ 0.15
NPAS4-201ENST00000311034 TLR7Q9NYK1 1049 aaKnown RBP15.99■□□□□ 0.15
NPAS4-201ENST00000311034 CGNQ9P2M7 1197 aaKnown RBP15.99■□□□□ 0.15
NPAS4-201ENST00000311034 ARHGEF10O15013 1369 aa15.98■□□□□ 0.15
NPAS4-201ENST00000311034 A0A0D9SFI3 127 aa15.98■□□□□ 0.15
NPAS4-201ENST00000311034 POLA2Q14181 598 aa15.98■□□□□ 0.15
NPAS4-201ENST00000311034 CACTINQ8WUQ7 758 aaKnown RBP15.98■□□□□ 0.15
NPAS4-201ENST00000311034 LEO1Q8WVC0 666 aaPredicted RBP15.98■□□□□ 0.15
NPAS4-201ENST00000311034 SEC62Q99442 399 aaKnown RBP15.98■□□□□ 0.15
NPAS4-201ENST00000311034 MYD88Q99836 296 aa15.98■□□□□ 0.15
NPAS4-201ENST00000311034 RNF20Q5VTR2 975 aa15.98■□□□□ 0.15
NPAS4-201ENST00000311034 TMX1Q9H3N1 280 aa15.98■□□□□ 0.15
NPAS4-201ENST00000311034 DLC1Q96QB1 1528 aa15.98■□□□□ 0.15
NPAS4-201ENST00000311034 NBPF6Q5VWK0 638 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 FAM177A1Q8N128 213 aaPredicted RBP15.97■□□□□ 0.15
NPAS4-201ENST00000311034 NBPF4Q96M43 638 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 SCAND2PQ9GZW5 306 aaPredicted RBP15.97■□□□□ 0.15
NPAS4-201ENST00000311034 BIN1O00499 593 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 FKBP4Q02790 459 aaKnown RBP eCLIP15.97■□□□□ 0.15
NPAS4-201ENST00000311034 CCDC144BQ3MJ40 725 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 CCDC144CPQ8IYA2 1237 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 CCDC82Q8N4S0 544 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 BRF1Q92994 677 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 EVI5LQ96CN4 794 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 GTPBP4Q9BZE4 634 aaKnown RBP15.97■□□□□ 0.15
NPAS4-201ENST00000311034 FTOQ9C0B1 505 aaKnown RBP eCLIP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms