RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 CWC25Q9NXE8 425 aaPredicted RBP16.35■□□□□ 0.21
APTX-201ENST00000309615 NPHP1O15259 732 aa16.35■□□□□ 0.21
APTX-201ENST00000309615 PLIN1O60240 522 aa16.35■□□□□ 0.21
APTX-201ENST00000309615 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
APTX-201ENST00000309615 NYXQ9GZU5 481 aa16.35■□□□□ 0.21
APTX-201ENST00000309615 TRMT112Q9UI30 125 aaKnown RBP16.35■□□□□ 0.21
APTX-201ENST00000309615 AFDNP55196 1824 aaKnown RBP16.35■□□□□ 0.21
APTX-201ENST00000309615 NRXN2Q9P2S2 1712 aa16.34■□□□□ 0.21
APTX-201ENST00000309615 SRCIN1Q9C0H9 1055 aa16.34■□□□□ 0.21
APTX-201ENST00000309615 PPP1R1BQ9UD71 204 aaPredicted RBP16.34■□□□□ 0.21
APTX-201ENST00000309615 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
APTX-201ENST00000309615 LRP5O75197 1615 aa16.34■□□□□ 0.21
APTX-201ENST00000309615 GTF2E1P29083 439 aaPredicted RBP16.33■□□□□ 0.21
APTX-201ENST00000309615 GCKRQ14397 625 aa16.33■□□□□ 0.21
APTX-201ENST00000309615 ERFEQ4G0M1 354 aa16.33■□□□□ 0.21
APTX-201ENST00000309615 RTL5Q5HYW3 569 aaPredicted RBP16.33■□□□□ 0.21
APTX-201ENST00000309615 JARID2Q92833 1246 aaPredicted RBP16.33■□□□□ 0.21
APTX-201ENST00000309615 FAM89AQ96GI7 184 aa16.33■□□□□ 0.21
APTX-201ENST00000309615 ABCC4O15439 1325 aa16.33■□□□□ 0.21
APTX-201ENST00000309615 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.2
APTX-201ENST00000309615 KLHL34Q8N239 644 aa16.33■□□□□ 0.2
APTX-201ENST00000309615 RLBP1P12271 317 aa16.32■□□□□ 0.2
APTX-201ENST00000309615 ST5P78524 1137 aa16.32■□□□□ 0.2
APTX-201ENST00000309615 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
APTX-201ENST00000309615 ABCC12Q96J65 1359 aa16.32■□□□□ 0.2
APTX-201ENST00000309615 C10orf71Q711Q0 1435 aa16.32■□□□□ 0.2
APTX-201ENST00000309615 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
APTX-201ENST00000309615 SH3TC1Q8TE82 1336 aa16.31■□□□□ 0.2
APTX-201ENST00000309615 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
APTX-201ENST00000309615 CCT4P50991 539 aaKnown RBP16.31■□□□□ 0.2
APTX-201ENST00000309615 FTSJ3Q8IY81 847 aaKnown RBP16.31■□□□□ 0.2
APTX-201ENST00000309615 DZIP1LQ8IYY4 767 aaKnown RBP16.31■□□□□ 0.2
APTX-201ENST00000309615 FHDC1Q9C0D6 1143 aaPredicted RBP16.31■□□□□ 0.2
APTX-201ENST00000309615 HCLS1P14317 486 aaPredicted RBP16.3■□□□□ 0.2
APTX-201ENST00000309615 RNF123Q5XPI4 1314 aa16.3■□□□□ 0.2
APTX-201ENST00000309615 INTS3Q68E01 1043 aaKnown RBP16.3■□□□□ 0.2
APTX-201ENST00000309615 UBE3BQ7Z3V4 1068 aa16.3■□□□□ 0.2
APTX-201ENST00000309615 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
APTX-201ENST00000309615 PANK1Q8TE04 598 aa16.3■□□□□ 0.2
APTX-201ENST00000309615 CD2APQ9Y5K6 639 aa16.3■□□□□ 0.2
APTX-201ENST00000309615 H7C1W4 665 aa16.29■□□□□ 0.2
APTX-201ENST00000309615 BRIP1Q9BX63 1249 aa16.29■□□□□ 0.2
APTX-201ENST00000309615 GRM8O00222 908 aa16.29■□□□□ 0.2
APTX-201ENST00000309615 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
APTX-201ENST00000309615 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.29■□□□□ 0.2
APTX-201ENST00000309615 C9orf78Q9NZ63 289 aaPredicted RBP16.29■□□□□ 0.2
APTX-201ENST00000309615 IRS4O14654 1257 aaPredicted RBP16.28■□□□□ 0.2
APTX-201ENST00000309615 CASP7P55210 303 aa16.28■□□□□ 0.2
APTX-201ENST00000309615 RRP1P56182 461 aaKnown RBP16.28■□□□□ 0.2
APTX-201ENST00000309615 C20orf194Q5TEA3 1177 aa16.28■□□□□ 0.2
APTX-201ENST00000309615 C3orf67Q6ZVT6 689 aa16.28■□□□□ 0.2
APTX-201ENST00000309615 USP44Q9H0E7 712 aa16.28■□□□□ 0.2
APTX-201ENST00000309615 NBPF7P0C2Y1 421 aaPredicted RBP16.27■□□□□ 0.2
APTX-201ENST00000309615 NLGN2Q8NFZ4 835 aa16.27■□□□□ 0.2
APTX-201ENST00000309615 SYT17Q9BSW7 474 aa16.27■□□□□ 0.2
APTX-201ENST00000309615 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.2
APTX-201ENST00000309615 N4BP2Q86UW6 1770 aaPredicted RBP16.27■□□□□ 0.2
APTX-201ENST00000309615 TNRC6CQ9HCJ0 1690 aaKnown RBP16.27■□□□□ 0.19
APTX-201ENST00000309615 KIF13BQ9NQT8 1826 aa16.27■□□□□ 0.19
APTX-201ENST00000309615 CHRNA5P30532 468 aa16.27■□□□□ 0.19
APTX-201ENST00000309615 PDE6BP35913 854 aa16.27■□□□□ 0.19
APTX-201ENST00000309615 CDHR2Q9BYE9 1310 aa16.26■□□□□ 0.19
APTX-201ENST00000309615 MS4A1P11836 297 aa16.26■□□□□ 0.19
APTX-201ENST00000309615 ITPRIPQ8IWB1 547 aa16.26■□□□□ 0.19
APTX-201ENST00000309615 SUPT16HQ9Y5B9 1047 aaKnown RBP16.26■□□□□ 0.19
APTX-201ENST00000309615 RIC1Q4ADV7 1423 aa16.26■□□□□ 0.19
APTX-201ENST00000309615 UTYO14607 1347 aa16.25■□□□□ 0.19
APTX-201ENST00000309615 A0A0G2JLW4 131 aa16.25■□□□□ 0.19
APTX-201ENST00000309615 KLRG2A4D1S0 409 aaPredicted RBP16.25■□□□□ 0.19
APTX-201ENST00000309615 TGFB2P61812 414 aa16.25■□□□□ 0.19
APTX-201ENST00000309615 MEIS3Q99687 375 aa16.25■□□□□ 0.19
APTX-201ENST00000309615 DPEP1P16444 411 aa16.25■□□□□ 0.19
APTX-201ENST00000309615 C2CD5Q86YS7 1000 aa16.25■□□□□ 0.19
APTX-201ENST00000309615 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
APTX-201ENST00000309615 DDX60Q8IY21 1712 aaKnown RBP16.24■□□□□ 0.19
APTX-201ENST00000309615 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
APTX-201ENST00000309615 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
APTX-201ENST00000309615 H0YIN7 160 aa16.23■□□□□ 0.19
APTX-201ENST00000309615 PDE8AO60658 829 aa16.23■□□□□ 0.19
APTX-201ENST00000309615 KCNA3P22001 575 aa16.23■□□□□ 0.19
APTX-201ENST00000309615 CRY2Q49AN0 593 aa16.23■□□□□ 0.19
APTX-201ENST00000309615 KIAA1551Q9HCM1 1747 aa16.23■□□□□ 0.19
APTX-201ENST00000309615 SRGNP10124 158 aa16.22■□□□□ 0.19
APTX-201ENST00000309615 HSP90B1P14625 803 aaKnown RBP16.22■□□□□ 0.19
APTX-201ENST00000309615 KAZALD1Q96I82 304 aa16.22■□□□□ 0.19
APTX-201ENST00000309615 SUCLG2Q96I99 432 aa16.22■□□□□ 0.19
APTX-201ENST00000309615 PLA2G12BQ9BX93 195 aa16.22■□□□□ 0.19
APTX-201ENST00000309615 COL11A2P13942 1736 aaPredicted RBP16.22■□□□□ 0.19
APTX-201ENST00000309615 GOLGB1Q14789 3259 aaKnown RBP16.22■□□□□ 0.19
APTX-201ENST00000309615 UBTFL1P0CB47 393 aaPredicted RBP16.22■□□□□ 0.19
APTX-201ENST00000309615 CTSWP56202 376 aa16.22■□□□□ 0.19
APTX-201ENST00000309615 FOXO4P98177 505 aa16.22■□□□□ 0.19
APTX-201ENST00000309615 MVPQ14764 893 aaKnown RBP16.22■□□□□ 0.19
APTX-201ENST00000309615 EPHA10Q5JZY3 1008 aa16.22■□□□□ 0.19
APTX-201ENST00000309615 WWC3Q9ULE0 1092 aa16.22■□□□□ 0.19
APTX-201ENST00000309615 LAMB2P55268 1798 aa16.22■□□□□ 0.19
APTX-201ENST00000309615 SF3B3Q15393 1217 aaKnown RBP16.21■□□□□ 0.19
APTX-201ENST00000309615 CCDC85AQ96PX6 553 aaPredicted RBP16.21■□□□□ 0.19
APTX-201ENST00000309615 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.19
APTX-201ENST00000309615 ZBTB7BO15156 539 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms