RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 RRAGCQ9HB90 399 aa22.07■■□□□ 1.12
HMGCLL1-202ENST00000308161 SALL2Q9Y467 1007 aaPredicted RBP22.07■■□□□ 1.12
HMGCLL1-202ENST00000308161 FER1L6Q2WGJ9 1857 aa22.07■■□□□ 1.12
HMGCLL1-202ENST00000308161 ZC3H4Q9UPT8 1303 aaKnown RBP22.07■■□□□ 1.12
HMGCLL1-202ENST00000308161 TCIRG1Q13488 830 aa22.06■■□□□ 1.12
HMGCLL1-202ENST00000308161 CRY2Q49AN0 593 aa22.06■■□□□ 1.12
HMGCLL1-202ENST00000308161 C3orf67Q6ZVT6 689 aa22.06■■□□□ 1.12
HMGCLL1-202ENST00000308161 NLRP10Q86W26 655 aa22.06■■□□□ 1.12
HMGCLL1-202ENST00000308161 C8orf58Q8NAV2 365 aa22.06■■□□□ 1.12
HMGCLL1-202ENST00000308161 C7orf43Q8WVR3 580 aa22.06■■□□□ 1.12
HMGCLL1-202ENST00000308161 TSR2Q969E8 191 aaKnown RBP22.06■■□□□ 1.12
HMGCLL1-202ENST00000308161 HYPKQ9NX55 129 aa22.06■■□□□ 1.12
HMGCLL1-202ENST00000308161 LTBP3Q9NS15 1303 aa22.05■■□□□ 1.12
HMGCLL1-202ENST00000308161 TCERG1O14776 1098 aaKnown RBP22.05■■□□□ 1.12
HMGCLL1-202ENST00000308161 TOMM70O94826 608 aa22.05■■□□□ 1.12
HMGCLL1-202ENST00000308161 ANKRD13DQ6ZTN6 518 aa22.05■■□□□ 1.12
HMGCLL1-202ENST00000308161 PLBD2Q8NHP8 589 aa22.05■■□□□ 1.12
HMGCLL1-202ENST00000308161 ANKRD36CQ5JPF3 1778 aa22.04■■□□□ 1.12
HMGCLL1-202ENST00000308161 NLRP3Q96P20 1036 aa22.04■■□□□ 1.12
HMGCLL1-202ENST00000308161 TRMT112Q9UI30 125 aaKnown RBP22.04■■□□□ 1.12
HMGCLL1-202ENST00000308161 RIC1Q4ADV7 1423 aa22.03■■□□□ 1.12
HMGCLL1-202ENST00000308161 GLTPD2A6NH11 291 aa22.03■■□□□ 1.12
HMGCLL1-202ENST00000308161 WWC1Q8IX03 1113 aa22.03■■□□□ 1.12
HMGCLL1-202ENST00000308161 FAM9BQ8IZU0 186 aa22.03■■□□□ 1.12
HMGCLL1-202ENST00000308161 RBM17Q96I25 401 aaKnown RBP22.03■■□□□ 1.12
HMGCLL1-202ENST00000308161 ZNF277Q9NRM2 450 aaPredicted RBP22.03■■□□□ 1.12
HMGCLL1-202ENST00000308161 ATP5J2-PTCD1G3V325 749 aa22.02■■□□□ 1.12
HMGCLL1-202ENST00000308161 HCLS1P14317 486 aaPredicted RBP22.02■■□□□ 1.12
HMGCLL1-202ENST00000308161 FKBP4Q02790 459 aaKnown RBP eCLIP22.02■■□□□ 1.12
HMGCLL1-202ENST00000308161 SYNE4Q8N205 404 aa22.02■■□□□ 1.12
HMGCLL1-202ENST00000308161 GOLGA2Q08379 1002 aa22.01■■□□□ 1.11
HMGCLL1-202ENST00000308161 CCDC27Q2M243 656 aa22.01■■□□□ 1.11
HMGCLL1-202ENST00000308161 DPY19L2Q6NUT2 758 aa22.01■■□□□ 1.11
HMGCLL1-202ENST00000308161 RIC3Q7Z5B4 369 aa22.01■■□□□ 1.11
HMGCLL1-202ENST00000308161 RTKN2Q8IZC4 609 aa22.01■■□□□ 1.11
HMGCLL1-202ENST00000308161 PHAXQ9H814 394 aaKnown RBP22.01■■□□□ 1.11
HMGCLL1-202ENST00000308161 HSPA6P17066 643 aa22■■□□□ 1.11
HMGCLL1-202ENST00000308161 HOXA10P31260 410 aaPredicted RBP22■■□□□ 1.11
HMGCLL1-202ENST00000308161 TSPYL6Q8N831 410 aa22■■□□□ 1.11
HMGCLL1-202ENST00000308161 CEP350Q5VT06 3117 aa21.99■■□□□ 1.11
HMGCLL1-202ENST00000308161 RNF123Q5XPI4 1314 aa21.99■■□□□ 1.11
HMGCLL1-202ENST00000308161 SH3TC1Q8TE82 1336 aa21.99■■□□□ 1.11
HMGCLL1-202ENST00000308161 PPEF1O14829 653 aaPredicted RBP21.99■■□□□ 1.11
HMGCLL1-202ENST00000308161 SLC10A5Q5PT55 438 aa21.99■■□□□ 1.11
HMGCLL1-202ENST00000308161 CCDC30Q5VVM6 783 aa21.99■■□□□ 1.11
HMGCLL1-202ENST00000308161 SLC51AQ86UW1 340 aa21.99■■□□□ 1.11
HMGCLL1-202ENST00000308161 CRAMP1Q96RY5 1269 aa21.99■■□□□ 1.11
HMGCLL1-202ENST00000308161 DICER1Q9UPY3 1922 aaKnown RBP21.98■■□□□ 1.11
HMGCLL1-202ENST00000308161 RTL5Q5HYW3 569 aaPredicted RBP21.98■■□□□ 1.11
HMGCLL1-202ENST00000308161 VEGFAP15692 232 aaPredicted RBP21.97■■□□□ 1.11
HMGCLL1-202ENST00000308161 RBM46Q8TBY0 533 aaKnown RBP21.97■■□□□ 1.11
HMGCLL1-202ENST00000308161 ISCA1Q9BUE6 129 aa21.97■■□□□ 1.11
HMGCLL1-202ENST00000308161 DDNO94850 711 aaPredicted RBP21.96■■□□□ 1.11
HMGCLL1-202ENST00000308161 FAM89AQ96GI7 184 aa21.96■■□□□ 1.11
HMGCLL1-202ENST00000308161 TMX4Q9H1E5 349 aaPredicted RBP21.96■■□□□ 1.11
HMGCLL1-202ENST00000308161 ABCC4O15439 1325 aa21.95■■□□□ 1.11
HMGCLL1-202ENST00000308161 IARSP41252 1262 aaKnown RBP21.95■■□□□ 1.1
HMGCLL1-202ENST00000308161 CC2D2BQ6DHV5 1058 aa21.95■■□□□ 1.1
HMGCLL1-202ENST00000308161 MYD88Q99836 296 aa21.95■■□□□ 1.1
HMGCLL1-202ENST00000308161 CHMP4AQ9BY43 222 aa21.95■■□□□ 1.1
HMGCLL1-202ENST00000308161 TWISTNBQ3B726 338 aaPredicted RBP21.94■■□□□ 1.1
HMGCLL1-202ENST00000308161 DDX46Q7L014 1031 aaKnown RBP21.94■■□□□ 1.1
HMGCLL1-202ENST00000308161 STK31Q9BXU1 1019 aa21.94■■□□□ 1.1
HMGCLL1-202ENST00000308161 IL16Q14005 1332 aa21.94■■□□□ 1.1
HMGCLL1-202ENST00000308161 FANCIQ9NVI1 1328 aa21.93■■□□□ 1.1
HMGCLL1-202ENST00000308161 LAMB2P55268 1798 aa21.93■■□□□ 1.1
HMGCLL1-202ENST00000308161 DDX58O95786 925 aaKnown RBP21.92■■□□□ 1.1
HMGCLL1-202ENST00000308161 PSMD1Q99460 953 aa21.92■■□□□ 1.1
HMGCLL1-202ENST00000308161 SNED1Q8TER0 1413 aa21.91■■□□□ 1.1
HMGCLL1-202ENST00000308161 JDP2Q8WYK2 163 aa21.91■■□□□ 1.1
HMGCLL1-202ENST00000308161 ATP6V0A2Q9Y487 856 aa21.91■■□□□ 1.1
HMGCLL1-202ENST00000308161 ZNF541Q9H0D2 1346 aa21.91■■□□□ 1.1
HMGCLL1-202ENST00000308161 POTECB2RU33 542 aa21.9■■□□□ 1.1
HMGCLL1-202ENST00000308161 IRS4O14654 1257 aaPredicted RBP21.9■■□□□ 1.1
HMGCLL1-202ENST00000308161 FSTL1Q12841 308 aa21.9■■□□□ 1.1
HMGCLL1-202ENST00000308161 NCBP3Q53F19 620 aaKnown RBP21.9■■□□□ 1.1
HMGCLL1-202ENST00000308161 SMC1BQ8NDV3 1235 aa21.9■■□□□ 1.1
HMGCLL1-202ENST00000308161 MAP3K2Q9Y2U5 619 aa21.9■■□□□ 1.1
HMGCLL1-202ENST00000308161 WDR90Q96KV7 1748 aa21.9■■□□□ 1.1
HMGCLL1-202ENST00000308161 GRAPQ13588 217 aa21.89■■□□□ 1.1
HMGCLL1-202ENST00000308161 WDR63Q8IWG1 891 aa21.89■■□□□ 1.1
HMGCLL1-202ENST00000308161 LARGE2Q8N3Y3 721 aa21.89■■□□□ 1.1
HMGCLL1-202ENST00000308161 GRAPLQ8TC17 118 aaPredicted RBP21.89■■□□□ 1.1
HMGCLL1-202ENST00000308161 DDX60Q8IY21 1712 aaKnown RBP21.88■■□□□ 1.09
HMGCLL1-202ENST00000308161 BBOX1O75936 387 aa21.88■■□□□ 1.09
HMGCLL1-202ENST00000308161 APLP1P51693 650 aa21.88■■□□□ 1.09
HMGCLL1-202ENST00000308161 TRIM28Q13263 835 aaKnown RBP21.88■■□□□ 1.09
HMGCLL1-202ENST00000308161 GRIPAP1Q4V328 841 aa21.88■■□□□ 1.09
HMGCLL1-202ENST00000308161 JARID2Q92833 1246 aaPredicted RBP21.88■■□□□ 1.09
HMGCLL1-202ENST00000308161 SLC4A2P04920 1241 aa21.87■■□□□ 1.09
HMGCLL1-202ENST00000308161 G2E3Q7L622 706 aa21.87■■□□□ 1.09
HMGCLL1-202ENST00000308161 METTL22Q9BUU2 404 aaPredicted RBP21.87■■□□□ 1.09
HMGCLL1-202ENST00000308161 CWC25Q9NXE8 425 aaPredicted RBP21.87■■□□□ 1.09
HMGCLL1-202ENST00000308161 PI4KAP2A4QPH2 592 aa21.86■■□□□ 1.09
HMGCLL1-202ENST00000308161 PPIP5K2O43314 1243 aa21.86■■□□□ 1.09
HMGCLL1-202ENST00000308161 EXOSC9Q06265 439 aaKnown RBP21.86■■□□□ 1.09
HMGCLL1-202ENST00000308161 DPP8Q6V1X1 898 aaPredicted RBP21.86■■□□□ 1.09
HMGCLL1-202ENST00000308161 PI4KAP1Q8N8J0 262 aa21.86■■□□□ 1.09
HMGCLL1-202ENST00000308161 ZBTB38Q8NAP3 1195 aaPredicted RBP21.86■■□□□ 1.09
HMGCLL1-202ENST00000308161 TAF1P21675 1872 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms