RNA–Protein interactions for RNA: ENST00000308153.8

H2AFV-202, Transcript of H2A histone family member V, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene H2AFV, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-202ENST00000308153 PPP1R42Q7Z4L9 355 aa37.63■■■■□ 3.61
H2AFV-202ENST00000308153 MBIPQ9NS73 344 aa37.63■■■■□ 3.61
H2AFV-202ENST00000308153 CHPF2Q9P2E5 772 aa37.63■■■■□ 3.61
H2AFV-202ENST00000308153 POTECB2RU33 542 aa37.62■■■■□ 3.61
H2AFV-202ENST00000308153 HOXA10P31260 410 aaPredicted RBP37.62■■■■□ 3.61
H2AFV-202ENST00000308153 FKBP4Q02790 459 aaKnown RBP eCLIP37.62■■■■□ 3.61
H2AFV-202ENST00000308153 CCDC184Q52MB2 194 aa37.62■■■■□ 3.61
H2AFV-202ENST00000308153 DPY19L2Q6NUT2 758 aa37.62■■■■□ 3.61
H2AFV-202ENST00000308153 ANKRD36CQ5JPF3 1778 aa37.62■■■■□ 3.61
H2AFV-202ENST00000308153 HDGFL1Q5TGJ6 251 aa37.61■■■■□ 3.61
H2AFV-202ENST00000308153 C3orf67Q6ZVT6 689 aa37.61■■■■□ 3.61
H2AFV-202ENST00000308153 RTKN2Q8IZC4 609 aa37.6■■■■□ 3.61
H2AFV-202ENST00000308153 RPGRQ92834 1020 aaKnown RBP37.59■■■■□ 3.61
H2AFV-202ENST00000308153 UTP14AQ9BVJ6 771 aaKnown RBP37.58■■■■□ 3.61
H2AFV-202ENST00000308153 HSP90AB3PQ58FF7 597 aa37.57■■■■□ 3.6
H2AFV-202ENST00000308153 DUSP27Q5VZP5 1158 aa37.57■■■■□ 3.6
H2AFV-202ENST00000308153 ZNF277Q9NRM2 450 aaPredicted RBP37.57■■■■□ 3.6
H2AFV-202ENST00000308153 SLC10A5Q5PT55 438 aa37.56■■■■□ 3.6
H2AFV-202ENST00000308153 NLRP10Q86W26 655 aa37.56■■■■□ 3.6
H2AFV-202ENST00000308153 SMC1BQ8NDV3 1235 aa37.56■■■■□ 3.6
H2AFV-202ENST00000308153 IFT57Q9NWB7 429 aa37.56■■■■□ 3.6
H2AFV-202ENST00000308153 TCIRG1Q13488 830 aa37.55■■■■□ 3.6
H2AFV-202ENST00000308153 DBF4Q9UBU7 674 aaPredicted RBP37.55■■■■□ 3.6
H2AFV-202ENST00000308153 RNF123Q5XPI4 1314 aa37.55■■■■□ 3.6
H2AFV-202ENST00000308153 DDNO94850 711 aaPredicted RBP37.54■■■■□ 3.6
H2AFV-202ENST00000308153 CRAMP1Q96RY5 1269 aa37.54■■■■□ 3.6
H2AFV-202ENST00000308153 SLC51AQ86UW1 340 aa37.52■■■■□ 3.6
H2AFV-202ENST00000308153 RBM17Q96I25 401 aaKnown RBP37.52■■■■□ 3.6
H2AFV-202ENST00000308153 NLRP3Q96P20 1036 aa37.52■■■■□ 3.6
H2AFV-202ENST00000308153 GNAI1P63096 354 aa37.51■■■■□ 3.6
H2AFV-202ENST00000308153 CALD1Q05682 793 aaKnown RBP37.51■■■■□ 3.6
H2AFV-202ENST00000308153 CC2D2BQ6DHV5 1058 aa37.51■■■■□ 3.6
H2AFV-202ENST00000308153 SYNE4Q8N205 404 aa37.51■■■■□ 3.6
H2AFV-202ENST00000308153 DNAJC5GQ8N7S2 189 aa37.51■■■■□ 3.6
H2AFV-202ENST00000308153 PSMD1Q99460 953 aa37.51■■■■□ 3.6
H2AFV-202ENST00000308153 PLBD2Q8NHP8 589 aa37.5■■■■□ 3.59
H2AFV-202ENST00000308153 IARSP41252 1262 aaKnown RBP37.49■■■■□ 3.59
H2AFV-202ENST00000308153 ANKRD13DQ6ZTN6 518 aa37.48■■■■□ 3.59
H2AFV-202ENST00000308153 ZNF541Q9H0D2 1346 aa37.47■■■■□ 3.59
H2AFV-202ENST00000308153 PPEF1O14829 653 aaPredicted RBP37.47■■■■□ 3.59
H2AFV-202ENST00000308153 HYPKQ9NX55 129 aa37.47■■■■□ 3.59
H2AFV-202ENST00000308153 LAMB2P55268 1798 aa37.47■■■■□ 3.59
H2AFV-202ENST00000308153 ZNF316A6NFI3 1004 aaPredicted RBP37.46■■■■□ 3.59
H2AFV-202ENST00000308153 HTRA3P83110 453 aa37.46■■■■□ 3.59
H2AFV-202ENST00000308153 TRMT112Q9UI30 125 aaKnown RBP37.46■■■■□ 3.59
H2AFV-202ENST00000308153 HCLS1P14317 486 aaPredicted RBP37.45■■■■□ 3.59
H2AFV-202ENST00000308153 L3MBTL3Q96JM7 780 aaPredicted RBP37.45■■■■□ 3.59
H2AFV-202ENST00000308153 ABCC4O15439 1325 aa37.44■■■■□ 3.58
H2AFV-202ENST00000308153 SH3TC1Q8TE82 1336 aa37.44■■■■□ 3.58
H2AFV-202ENST00000308153 ISCA1Q9BUE6 129 aa37.44■■■■□ 3.58
H2AFV-202ENST00000308153 COL4A5P29400 1685 aa37.44■■■■□ 3.58
H2AFV-202ENST00000308153 FZD9O00144 591 aa37.43■■■■□ 3.58
H2AFV-202ENST00000308153 GRIPAP1Q4V328 841 aa37.43■■■■□ 3.58
H2AFV-202ENST00000308153 ELL2O00472 640 aaPredicted RBP37.42■■■■□ 3.58
H2AFV-202ENST00000308153 TCERG1O14776 1098 aaKnown RBP37.42■■■■□ 3.58
H2AFV-202ENST00000308153 C8orf58Q8NAV2 365 aa37.42■■■■□ 3.58
H2AFV-202ENST00000308153 ZNF428Q96B54 188 aa37.41■■■■□ 3.58
H2AFV-202ENST00000308153 POTEIP0CG38 1075 aa37.39■■■■□ 3.58
H2AFV-202ENST00000308153 POTEJP0CG39 1038 aa37.39■■■■□ 3.58
H2AFV-202ENST00000308153 ATP6V0A2Q9Y487 856 aa37.39■■■■□ 3.58
H2AFV-202ENST00000308153 SCN4AP35499 1836 aa37.38■■■■□ 3.58
H2AFV-202ENST00000308153 ATP5J2-PTCD1G3V325 749 aa37.38■■■■□ 3.57
H2AFV-202ENST00000308153 CCDC27Q2M243 656 aa37.38■■■■□ 3.57
H2AFV-202ENST00000308153 DDX60Q8IY21 1712 aaKnown RBP37.38■■■■□ 3.57
H2AFV-202ENST00000308153 IQCA1LA6NCM1 817 aa37.37■■■■□ 3.57
H2AFV-202ENST00000308153 PHAXQ9H814 394 aaKnown RBP37.37■■■■□ 3.57
H2AFV-202ENST00000308153 JDP2Q8WYK2 163 aa37.35■■■■□ 3.57
H2AFV-202ENST00000308153 TAF1DQ9H5J8 278 aaPredicted RBP37.35■■■■□ 3.57
H2AFV-202ENST00000308153 MRS2Q9HD23 443 aa37.35■■■■□ 3.57
H2AFV-202ENST00000308153 TRIM28Q13263 835 aaKnown RBP37.34■■■■□ 3.57
H2AFV-202ENST00000308153 WWC1Q8IX03 1113 aa37.34■■■■□ 3.57
H2AFV-202ENST00000308153 FAM89AQ96GI7 184 aa37.34■■■■□ 3.57
H2AFV-202ENST00000308153 ANP32CO43423 234 aa37.33■■■■□ 3.57
H2AFV-202ENST00000308153 BBOX1O75936 387 aa37.33■■■■□ 3.57
H2AFV-202ENST00000308153 CHADLQ6NUI6 762 aa37.33■■■■□ 3.57
H2AFV-202ENST00000308153 TSPYL6Q8N831 410 aa37.33■■■■□ 3.57
H2AFV-202ENST00000308153 KLRG1Q96E93 195 aa37.33■■■■□ 3.57
H2AFV-202ENST00000308153 TSR2Q969E8 191 aaKnown RBP37.32■■■■□ 3.56
H2AFV-202ENST00000308153 GOLGA2Q08379 1002 aa37.31■■■■□ 3.56
H2AFV-202ENST00000308153 GRAPQ13588 217 aa37.31■■■■□ 3.56
H2AFV-202ENST00000308153 DDX46Q7L014 1031 aaKnown RBP37.31■■■■□ 3.56
H2AFV-202ENST00000308153 RIC3Q7Z5B4 369 aa37.31■■■■□ 3.56
H2AFV-202ENST00000308153 GPC2Q8N158 579 aa37.31■■■■□ 3.56
H2AFV-202ENST00000308153 LARGE2Q8N3Y3 721 aa37.31■■■■□ 3.56
H2AFV-202ENST00000308153 GRAPLQ8TC17 118 aaPredicted RBP37.31■■■■□ 3.56
H2AFV-202ENST00000308153 SP8Q8IXZ3 490 aa37.3■■■■□ 3.56
H2AFV-202ENST00000308153 RTFDC1Q9BY42 306 aaPredicted RBP37.3■■■■□ 3.56
H2AFV-202ENST00000308153 TAF1P21675 1872 aa37.3■■■■□ 3.56
H2AFV-202ENST00000308153 TMX4Q9H1E5 349 aaPredicted RBP37.29■■■■□ 3.56
H2AFV-202ENST00000308153 HACL1Q9UJ83 578 aa37.29■■■■□ 3.56
H2AFV-202ENST00000308153 NCBP3Q53F19 620 aaKnown RBP37.28■■■■□ 3.56
H2AFV-202ENST00000308153 CCDC30Q5VVM6 783 aa37.28■■■■□ 3.56
H2AFV-202ENST00000308153 EIF6P56537 245 aaKnown RBP37.27■■■■□ 3.56
H2AFV-202ENST00000308153 SF3B3Q15393 1217 aaKnown RBP37.27■■■■□ 3.56
H2AFV-202ENST00000308153 LDHDQ86WU2 507 aa37.27■■■■□ 3.56
H2AFV-202ENST00000308153 PPIP5K2O43314 1243 aa37.26■■■■□ 3.56
H2AFV-202ENST00000308153 RTL5Q5HYW3 569 aaPredicted RBP37.26■■■■□ 3.56
H2AFV-202ENST00000308153 ADAMTSL1Q8N6G6 1762 aa37.25■■■■□ 3.55
H2AFV-202ENST00000308153 EPHX2P34913 555 aa37.25■■■■□ 3.55
H2AFV-202ENST00000308153 AOC3Q16853 763 aa37.25■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms