RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 BOLA2Q9H3K6 86 aa13.89□□□□□ -0.19
FOXP4-201ENST00000307972 TNNT1P13805 278 aa13.88□□□□□ -0.19
FOXP4-201ENST00000307972 ZNF165P49910 485 aa13.88□□□□□ -0.19
FOXP4-201ENST00000307972 CEBPZQ03701 1054 aaKnown RBP13.88□□□□□ -0.19
FOXP4-201ENST00000307972 BEND3Q5T5X7 828 aa13.88□□□□□ -0.19
FOXP4-201ENST00000307972 CBX8Q9HC52 389 aa13.88□□□□□ -0.19
FOXP4-201ENST00000307972 MRVI1Q9Y6F6 885 aa13.88□□□□□ -0.19
FOXP4-201ENST00000307972 NMIQ13287 307 aaPredicted RBP13.88□□□□□ -0.19
FOXP4-201ENST00000307972 DDX19AQ9NUU7 478 aaKnown RBP13.88□□□□□ -0.19
FOXP4-201ENST00000307972 EID1Q9Y6B2 187 aa13.88□□□□□ -0.19
FOXP4-201ENST00000307972 AMOTL2Q9Y2J4 779 aa13.88□□□□□ -0.19
FOXP4-201ENST00000307972 PDIA4P13667 645 aaKnown RBP13.87□□□□□ -0.19
FOXP4-201ENST00000307972 CCDC112Q8NEF3 446 aa13.87□□□□□ -0.19
FOXP4-201ENST00000307972 BABAM1Q9NWV8 329 aa13.87□□□□□ -0.19
FOXP4-201ENST00000307972 CLIP2Q9UDT6 1046 aa13.87□□□□□ -0.19
FOXP4-201ENST00000307972 CEP170BQ9Y4F5 1589 aaPredicted RBP13.87□□□□□ -0.19
FOXP4-201ENST00000307972 BTBD11A6QL63 1104 aa13.87□□□□□ -0.19
FOXP4-201ENST00000307972 FOSBP53539 338 aa13.87□□□□□ -0.19
FOXP4-201ENST00000307972 DNAJC25Q9H1X3 360 aa13.87□□□□□ -0.19
FOXP4-201ENST00000307972 NAP1L2Q9ULW6 460 aaPredicted RBP13.87□□□□□ -0.19
FOXP4-201ENST00000307972 MAP3K2Q9Y2U5 619 aa13.87□□□□□ -0.19
FOXP4-201ENST00000307972 AKAP12Q02952 1782 aa13.87□□□□□ -0.19
FOXP4-201ENST00000307972 NPHP3Q7Z494 1330 aa13.87□□□□□ -0.19
FOXP4-201ENST00000307972 AIMP1Q12904 312 aaKnown RBP13.87□□□□□ -0.19
FOXP4-201ENST00000307972 LARP1Q6PKG0 1096 aaKnown RBP13.87□□□□□ -0.19
FOXP4-201ENST00000307972 NRBP1Q9UHY1 535 aa13.87□□□□□ -0.19
FOXP4-201ENST00000307972 BECN2A8MW95 431 aa13.86□□□□□ -0.19
FOXP4-201ENST00000307972 IGSF3O75054 1194 aa13.86□□□□□ -0.19
FOXP4-201ENST00000307972 ZSCAN20P17040 1043 aaPredicted RBP13.86□□□□□ -0.19
FOXP4-201ENST00000307972 NECTIN1Q15223 517 aa13.86□□□□□ -0.19
FOXP4-201ENST00000307972 LGR6Q9HBX8 967 aa13.86□□□□□ -0.19
FOXP4-201ENST00000307972 TECPR2O15040 1411 aa13.86□□□□□ -0.19
FOXP4-201ENST00000307972 SLC27A2O14975 620 aa13.86□□□□□ -0.19
FOXP4-201ENST00000307972 PEAK1Q9H792 1746 aa13.86□□□□□ -0.19
FOXP4-201ENST00000307972 EIF4A1P60842 406 aaKnown RBP13.86□□□□□ -0.19
FOXP4-201ENST00000307972 CWF19L2Q2TBE0 894 aaKnown RBP13.86□□□□□ -0.19
FOXP4-201ENST00000307972 DDX11Q96FC9 970 aa13.86□□□□□ -0.19
FOXP4-201ENST00000307972 TNRQ92752 1358 aa13.85□□□□□ -0.19
FOXP4-201ENST00000307972 KCNQ3O43525 872 aa13.85□□□□□ -0.19
FOXP4-201ENST00000307972 ZNF771Q7L3S4 317 aaPredicted RBP13.85□□□□□ -0.19
FOXP4-201ENST00000307972 LEO1Q8WVC0 666 aaPredicted RBP13.85□□□□□ -0.19
FOXP4-201ENST00000307972 GTPBP4Q9BZE4 634 aaKnown RBP13.85□□□□□ -0.19
FOXP4-201ENST00000307972 DBF4Q9UBU7 674 aaPredicted RBP13.85□□□□□ -0.19
FOXP4-201ENST00000307972 TMEM2Q9UHN6 1383 aa13.85□□□□□ -0.19
FOXP4-201ENST00000307972 ZNF75DP51815 510 aa13.85□□□□□ -0.19
FOXP4-201ENST00000307972 UTP14CQ5TAP6 766 aaKnown RBP13.85□□□□□ -0.19
FOXP4-201ENST00000307972 PXDNLA1KZ92 1463 aa13.84□□□□□ -0.19
FOXP4-201ENST00000307972 SPATA31D1Q6ZQQ2 1576 aa13.84□□□□□ -0.19
FOXP4-201ENST00000307972 ZNF530Q6P9A1 599 aaPredicted RBP13.84□□□□□ -0.19
FOXP4-201ENST00000307972 MPRIPQ6WCQ1 1025 aa13.84□□□□□ -0.19
FOXP4-201ENST00000307972 ST3GAL1Q11201 340 aa13.84□□□□□ -0.19
FOXP4-201ENST00000307972 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
FOXP4-201ENST00000307972 FBXW7Q969H0 707 aa13.84□□□□□ -0.19
FOXP4-201ENST00000307972 ELP1O95163 1332 aa13.84□□□□□ -0.19
FOXP4-201ENST00000307972 NR1I2O75469 434 aa13.84□□□□□ -0.19
FOXP4-201ENST00000307972 MAP4K1Q92918 833 aa13.84□□□□□ -0.19
FOXP4-201ENST00000307972 SETD1AO15047 1707 aaKnown RBP13.83□□□□□ -0.19
FOXP4-201ENST00000307972 SMTNL1A8MU46 457 aa13.83□□□□□ -0.2
FOXP4-201ENST00000307972 LTKP29376 864 aa13.83□□□□□ -0.2
FOXP4-201ENST00000307972 ZSCAN25Q6NSZ9 544 aa13.83□□□□□ -0.2
FOXP4-201ENST00000307972 CLSTN2Q9H4D0 955 aa13.83□□□□□ -0.2
FOXP4-201ENST00000307972 RPS6KB1P23443 525 aa13.83□□□□□ -0.2
FOXP4-201ENST00000307972 ZRSR1Q15695 479 aaKnown RBP13.83□□□□□ -0.2
FOXP4-201ENST00000307972 FILIP1Q7Z7B0 1213 aa13.83□□□□□ -0.2
FOXP4-201ENST00000307972 A0A0D9SFI3 127 aa13.82□□□□□ -0.2
FOXP4-201ENST00000307972 C1orf141Q5JVX7 400 aa13.82□□□□□ -0.2
FOXP4-201ENST00000307972 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
FOXP4-201ENST00000307972 NRXN3Q9Y4C0 1643 aa13.82□□□□□ -0.2
FOXP4-201ENST00000307972 BRF1Q92994 677 aa13.82□□□□□ -0.2
FOXP4-201ENST00000307972 EAF2Q96CJ1 260 aaPredicted RBP13.82□□□□□ -0.2
FOXP4-201ENST00000307972 CFAP45Q9UL16 551 aa13.82□□□□□ -0.2
FOXP4-201ENST00000307972 USP42Q9H9J4 1324 aaKnown RBP13.82□□□□□ -0.2
FOXP4-201ENST00000307972 JAK2O60674 1132 aa13.81□□□□□ -0.2
FOXP4-201ENST00000307972 CCDC73Q6ZRK6 1079 aa13.81□□□□□ -0.2
FOXP4-201ENST00000307972 PAXBP1Q9Y5B6 917 aa13.81□□□□□ -0.2
FOXP4-201ENST00000307972 KIF13AQ9H1H9 1805 aa13.81□□□□□ -0.2
FOXP4-201ENST00000307972 ALDH1L1O75891 902 aa13.81□□□□□ -0.2
FOXP4-201ENST00000307972 DDX58O95786 925 aaKnown RBP13.81□□□□□ -0.2
FOXP4-201ENST00000307972 CEP135Q66GS9 1140 aa13.81□□□□□ -0.2
FOXP4-201ENST00000307972 XRN1Q8IZH2 1706 aaKnown RBP13.81□□□□□ -0.2
FOXP4-201ENST00000307972 HOXB7P09629 217 aa13.8□□□□□ -0.2
FOXP4-201ENST00000307972 KSR2Q6VAB6 950 aa13.8□□□□□ -0.2
FOXP4-201ENST00000307972 RIC3Q7Z5B4 369 aa13.8□□□□□ -0.2
FOXP4-201ENST00000307972 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.8□□□□□ -0.2
FOXP4-201ENST00000307972 NCBP1Q09161 790 aaKnown RBP13.8□□□□□ -0.2
FOXP4-201ENST00000307972 CACTINQ8WUQ7 758 aaKnown RBP13.8□□□□□ -0.2
FOXP4-201ENST00000307972 ANKRD7Q92527 254 aa13.8□□□□□ -0.2
FOXP4-201ENST00000307972 FEZ1Q99689 392 aa13.8□□□□□ -0.2
FOXP4-201ENST00000307972 GRM8O00222 908 aa13.8□□□□□ -0.2
FOXP4-201ENST00000307972 KINO60870 393 aaKnown RBP13.8□□□□□ -0.2
FOXP4-201ENST00000307972 KRT32Q14532 448 aa13.8□□□□□ -0.2
FOXP4-201ENST00000307972 TDRD7Q8NHU6 1098 aaKnown RBP13.8□□□□□ -0.2
FOXP4-201ENST00000307972 DNAJC2Q99543 621 aaKnown RBP13.8□□□□□ -0.2
FOXP4-201ENST00000307972 LRRC2Q9BYS8 371 aa13.8□□□□□ -0.2
FOXP4-201ENST00000307972 BICC1Q9H694 974 aaKnown RBP13.8□□□□□ -0.2
FOXP4-201ENST00000307972 TRMT1Q9NXH9 659 aaKnown RBP13.8□□□□□ -0.2
FOXP4-201ENST00000307972 TLR7Q9NYK1 1049 aaKnown RBP13.8□□□□□ -0.2
FOXP4-201ENST00000307972 CGNQ9P2M7 1197 aaKnown RBP13.8□□□□□ -0.2
FOXP4-201ENST00000307972 RGPD1P0DJD0 1748 aa13.8□□□□□ -0.2
FOXP4-201ENST00000307972 COL9A3Q14050 684 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms