RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 GOLGA5Q8TBA6 731 aa6.32□□□□□ -1.4
USP8-201ENST00000307179 CACTINQ8WUQ7 758 aaKnown RBP6.32□□□□□ -1.4
USP8-201ENST00000307179 RILPL2Q969X0 211 aa6.32□□□□□ -1.4
USP8-201ENST00000307179 SPATA32Q96LK8 384 aa6.32□□□□□ -1.4
USP8-201ENST00000307179 DNAI1Q9UI46 699 aa6.32□□□□□ -1.4
USP8-201ENST00000307179 KDM3BQ7LBC6 1761 aa6.32□□□□□ -1.4
USP8-201ENST00000307179 PEAK1Q9H792 1746 aa6.32□□□□□ -1.4
USP8-201ENST00000307179 GLRX3O76003 335 aaKnown RBP6.32□□□□□ -1.4
USP8-201ENST00000307179 POLA2Q14181 598 aa6.32□□□□□ -1.4
USP8-201ENST00000307179 CEP57L1Q8IYX8 460 aa6.32□□□□□ -1.4
USP8-201ENST00000307179 EXOC4Q96A65 974 aa6.32□□□□□ -1.4
USP8-201ENST00000307179 CDK19Q9BWU1 502 aa6.32□□□□□ -1.4
USP8-201ENST00000307179 FEZ2Q9UHY8 353 aaPredicted RBP6.32□□□□□ -1.4
USP8-201ENST00000307179 EFCAB8A8MWE9 144 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 ZRANB2O95218 330 aaKnown RBP eCLIP6.31□□□□□ -1.41e-8■■■■■ 56
USP8-201ENST00000307179 SKILP12757 684 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 CCZ1BP86790 482 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 CCZ1P86791 482 aaPredicted RBP6.31□□□□□ -1.4
USP8-201ENST00000307179 TUBB2AQ13885 445 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 COG3Q96JB2 828 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 TUBB2BQ9BVA1 445 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.31□□□□□ -1.48e-7■■■□□ 16.1
USP8-201ENST00000307179 FHOD1Q9Y613 1164 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 SLIT1O75093 1534 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 RPS6KA5O75582 802 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 PNMA6AP0CW24 399 aaPredicted RBP6.31□□□□□ -1.4
USP8-201ENST00000307179 ERBB3P21860 1342 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 PSME1Q06323 249 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 IQCB1Q15051 598 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 ELF2Q15723 593 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 CCDC30Q5VVM6 783 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 TTC6Q86TZ1 520 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 LUZP1Q86V48 1076 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 ERC1Q8IUD2 1116 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 CHAMP1Q96JM3 812 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 UPF3BQ9BZI7 483 aaKnown RBP6.31□□□□□ -1.4
USP8-201ENST00000307179 BCL11BQ9C0K0 894 aaPredicted RBP6.31□□□□□ -1.4
USP8-201ENST00000307179 MRC1P22897 1456 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 OVOS2A0A0J9YW53 1432 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 OVOS2Q6IE36 1432 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 FAM177BA6PVY3 158 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 TUBBP07437 444 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 KRT32Q14532 448 aa6.31□□□□□ -1.4
USP8-201ENST00000307179 LARP1BQ659C4 914 aaKnown RBP6.31□□□□□ -1.4
USP8-201ENST00000307179 LEO1Q8WVC0 666 aaPredicted RBP6.31□□□□□ -1.4
USP8-201ENST00000307179 CCDC69A6NI79 296 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 TSGA10IPQ3SY00 556 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 PI4K2BQ8TCG2 481 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 LLPHQ9BRT6 129 aaKnown RBP6.3□□□□□ -1.4
USP8-201ENST00000307179 FAM107BQ9H098 131 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 NRXN3Q9Y4C0 1643 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 CASTP20810 708 aaKnown RBP6.3□□□□□ -1.4
USP8-201ENST00000307179 RAD51AP2Q09MP3 1159 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 PRAM1Q96QH2 718 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 DACT1Q9NYF0 836 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 KDRP35968 1356 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 USP31Q70CQ4 1352 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 CAPN2P17655 700 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 LRRFIP1Q32MZ4 808 aaKnown RBP6.3□□□□□ -1.4
USP8-201ENST00000307179 GPR161Q8N6U8 529 aaKnown RBP6.3□□□□□ -1.4
USP8-201ENST00000307179 ORC3Q9UBD5 711 aaPredicted RBP6.3□□□□□ -1.4
USP8-201ENST00000307179 VPS37CA5D8V6 355 aaPredicted RBP6.3□□□□□ -1.4
USP8-201ENST00000307179 BECN2A8MW95 431 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 CBFA2T2O43439 604 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 HMOX1P09601 288 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 CLCN6P51797 869 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 LRMPQ12912 555 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 TEX2Q8IWB9 1127 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 CCDC83Q8IWF9 413 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 ZNF396Q96N95 335 aaPredicted RBP6.3□□□□□ -1.4
USP8-201ENST00000307179 MPHOSPH8Q99549 860 aa6.3□□□□□ -1.4
USP8-201ENST00000307179 UTP14AQ9BVJ6 771 aaKnown RBP6.3□□□□□ -1.4
USP8-201ENST00000307179 ZSCAN12O43309 604 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 SLC4A2P04920 1241 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 CASQ1P31415 396 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 HNRNPH2P55795 449 aaKnown RBP6.29□□□□□ -1.4
USP8-201ENST00000307179 AXDND1Q5T1B0 1012 aaPredicted RBP6.29□□□□□ -1.4
USP8-201ENST00000307179 NAA16Q6N069 864 aaPredicted RBP6.29□□□□□ -1.4
USP8-201ENST00000307179 CCDC73Q6ZRK6 1079 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 UBXN4Q92575 508 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 THUMPD2Q9BTF0 503 aaKnown RBP6.29□□□□□ -1.4
USP8-201ENST00000307179 MKRN1Q9UHC7 482 aaKnown RBP6.29□□□□□ -1.4
USP8-201ENST00000307179 LIG1P18858 919 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 TNNT3P45378 269 aaPredicted RBP6.29□□□□□ -1.4
USP8-201ENST00000307179 NOL8Q76FK4 1167 aaKnown RBP6.29□□□□□ -1.4
USP8-201ENST00000307179 EVI5LQ96CN4 794 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 ZNF446Q9NWS9 450 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 SPEF2Q9C093 1822 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 MINK1Q8N4C8 1332 aaPredicted RBP6.29□□□□□ -1.4
USP8-201ENST00000307179 LMTK3Q96Q04 1460 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 HOXB7P09629 217 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 UBTFL1P0CB47 393 aaPredicted RBP6.29□□□□□ -1.4
USP8-201ENST00000307179 SF3B2Q13435 895 aaKnown RBP6.29□□□□□ -1.4
USP8-201ENST00000307179 BRD3Q15059 726 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 MNS1Q8NEH6 495 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 FBXO18Q8NFZ0 1043 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 BICD2Q8TD16 824 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 PPP1R13BQ96KQ4 1090 aa6.29□□□□□ -1.4
USP8-201ENST00000307179 CABP1Q9NZU7 370 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms