RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 PDZRN3Q9UPQ7 1066 aa9.96□□□□□ -0.82
TM4SF1-201ENST00000305366 SCN11AQ9UI33 1791 aa9.95□□□□□ -0.82
TM4SF1-201ENST00000305366 KIF13BQ9NQT8 1826 aa9.95□□□□□ -0.82
TM4SF1-201ENST00000305366 PDE3AQ14432 1141 aa9.95□□□□□ -0.82
TM4SF1-201ENST00000305366 CCDC27Q2M243 656 aa9.95□□□□□ -0.82
TM4SF1-201ENST00000305366 PPP4R3CPQ6ZMV5 832 aa9.95□□□□□ -0.82
TM4SF1-201ENST00000305366 ZNF277Q9NRM2 450 aaPredicted RBP9.95□□□□□ -0.82
TM4SF1-201ENST00000305366 HTATSF1O43719 755 aaKnown RBP9.94□□□□□ -0.82
TM4SF1-201ENST00000305366 CAPN15O75808 1086 aa9.94□□□□□ -0.82
TM4SF1-201ENST00000305366 CLEC4GQ6UXB4 293 aa9.94□□□□□ -0.82
TM4SF1-201ENST00000305366 NUTM1Q86Y26 1132 aa9.94□□□□□ -0.82
TM4SF1-201ENST00000305366 WDR63Q8IWG1 891 aa9.94□□□□□ -0.82
TM4SF1-201ENST00000305366 ADAMTS7Q9UKP4 1686 aa9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 POTEIP0CG38 1075 aa9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 POTEJP0CG39 1038 aa9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 NPR1P16066 1061 aa9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 GPTP24298 496 aa9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 COL13A1Q5TAT6 717 aaPredicted RBP9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 UBE2Q2Q8WVN8 375 aa9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 ZBTB3Q9H5J0 574 aa9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 ZC3H4Q9UPT8 1303 aaKnown RBP9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 CDK11BP21127 795 aaKnown RBP9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 AAMPQ13685 434 aa9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 TTLL7Q6ZT98 887 aa9.93□□□□□ -0.82
TM4SF1-201ENST00000305366 HMGB1P09429 215 aaKnown RBP9.92□□□□□ -0.82
TM4SF1-201ENST00000305366 EIF2S2P20042 333 aaKnown RBP9.92□□□□□ -0.82
TM4SF1-201ENST00000305366 CCDC93Q567U6 631 aa9.92□□□□□ -0.82
TM4SF1-201ENST00000305366 EAPPQ56P03 285 aaPredicted RBP9.92□□□□□ -0.82
TM4SF1-201ENST00000305366 SOGA3Q5TF21 947 aa9.92□□□□□ -0.82
TM4SF1-201ENST00000305366 NECTIN2Q92692 538 aa9.92□□□□□ -0.82
TM4SF1-201ENST00000305366 DDRGK1Q96HY6 314 aa9.92□□□□□ -0.82
TM4SF1-201ENST00000305366 MKRN1Q9UHC7 482 aaKnown RBP9.92□□□□□ -0.82
TM4SF1-201ENST00000305366 CLEC11AQ9Y240 323 aa9.92□□□□□ -0.82
TM4SF1-201ENST00000305366 MAPK8IP3Q9UPT6 1336 aa9.92□□□□□ -0.82
TM4SF1-201ENST00000305366 BCAR3O75815 825 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 EIF4A1P60842 406 aaKnown RBP9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 NEUROD2Q15784 382 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 NFE2L2Q16236 605 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 KIF6Q6ZMV9 814 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 SYNE4Q8N205 404 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 C7orf43Q8WVR3 580 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 ZNF428Q96B54 188 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 FKBP4Q02790 459 aaKnown RBP eCLIP9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 FAM161AQ3B820 660 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 CHADLQ6NUI6 762 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 JMYQ8N9B5 988 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 CNKSR2Q8WXI2 1034 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 PLEKHF1Q96S99 279 aa9.91□□□□□ -0.82
TM4SF1-201ENST00000305366 ANXA1P04083 346 aa9.9□□□□□ -0.82
TM4SF1-201ENST00000305366 ALDH1B1P30837 517 aa9.9□□□□□ -0.82
TM4SF1-201ENST00000305366 RIPK4P57078 832 aa9.9□□□□□ -0.82
TM4SF1-201ENST00000305366 SUSD4Q5VX71 490 aa9.9□□□□□ -0.82
TM4SF1-201ENST00000305366 SLC51AQ86UW1 340 aa9.9□□□□□ -0.82
TM4SF1-201ENST00000305366 TSPYL4Q9UJ04 414 aa9.9□□□□□ -0.82
TM4SF1-201ENST00000305366 AIMP1Q12904 312 aaKnown RBP9.89□□□□□ -0.83
TM4SF1-201ENST00000305366 RTKN2Q8IZC4 609 aa9.89□□□□□ -0.83
TM4SF1-201ENST00000305366 RPGRQ92834 1020 aaKnown RBP9.89□□□□□ -0.83
TM4SF1-201ENST00000305366 ZNF541Q9H0D2 1346 aa9.89□□□□□ -0.83
TM4SF1-201ENST00000305366 LTBP3Q9NS15 1303 aa9.89□□□□□ -0.83
TM4SF1-201ENST00000305366 LAS1LQ9Y4W2 734 aaKnown RBP9.89□□□□□ -0.83
TM4SF1-201ENST00000305366 GJA3Q9Y6H8 435 aa9.89□□□□□ -0.83
TM4SF1-201ENST00000305366 MAP3K15Q6ZN16 1313 aa9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 CT47B1P0C2W7 299 aaPredicted RBP9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 HSPA1AP0DMV8 641 aaKnown RBP9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 HSPA1BP0DMV9 641 aaKnown RBP9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 RARSP54136 660 aaKnown RBP9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 C8orf34Q49A92 452 aa9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 TNS4Q8IZW8 715 aa9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 CHMP4AQ9BY43 222 aa9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 NYXQ9GZU5 481 aa9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 PNNQ9H307 717 aaKnown RBP9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 TAF1DQ9H5J8 278 aaPredicted RBP9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 RNF216Q9NWF9 866 aaPredicted RBP9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 KLRG2A4D1S0 409 aaPredicted RBP9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 IQCA1LA6NCM1 817 aa9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 ERVV-1B6SEH8 477 aa9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 IARSP41252 1262 aaKnown RBP9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 JDP2Q8WYK2 163 aa9.88□□□□□ -0.83
TM4SF1-201ENST00000305366 BRCA1P38398 1863 aaKnown RBP9.87□□□□□ -0.83
TM4SF1-201ENST00000305366 AFDNP55196 1824 aaKnown RBP9.87□□□□□ -0.83
TM4SF1-201ENST00000305366 ARFGEF1Q9Y6D6 1849 aa9.87□□□□□ -0.83
TM4SF1-201ENST00000305366 C3orf67Q6ZVT6 689 aa9.87□□□□□ -0.83
TM4SF1-201ENST00000305366 SKAP1Q86WV1 359 aa9.87□□□□□ -0.83
TM4SF1-201ENST00000305366 CLUAP1Q96AJ1 413 aa9.87□□□□□ -0.83
TM4SF1-201ENST00000305366 MYH16Q9H6N6 1097 aa9.87□□□□□ -0.83
TM4SF1-201ENST00000305366 HACL1Q9UJ83 578 aa9.87□□□□□ -0.83
TM4SF1-201ENST00000305366 NRXN2Q9P2S2 1712 aa9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 ABCC12Q96J65 1359 aa9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 UBN2Q6ZU65 1347 aa9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 EPHX2P34913 555 aa9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 PROSER3Q2NL68 480 aa9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 MAP1SQ66K74 1059 aaPredicted RBP9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 LDHDQ86WU2 507 aa9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 RBM17Q96I25 401 aaKnown RBP9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 UBR2Q8IWV8 1755 aa9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 EIF6P56537 245 aaKnown RBP9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 PPP1R42Q7Z4L9 355 aa9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 LARGE2Q8N3Y3 721 aa9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 TMX4Q9H1E5 349 aaPredicted RBP9.86□□□□□ -0.83
TM4SF1-201ENST00000305366 CREBZFQ9NS37 354 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms