RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 DGKZQ13574 1117 aa13.55□□□□□ -0.24
COL4A3-201ENST00000304990 USP50Q70EL3 339 aaPredicted RBP13.55□□□□□ -0.24
COL4A3-201ENST00000304990 PSMD1Q99460 953 aa13.55□□□□□ -0.24
COL4A3-201ENST00000304990 TLL2Q9Y6L7 1015 aa13.55□□□□□ -0.24
COL4A3-201ENST00000304990 LTBP1Q14766 1721 aa13.55□□□□□ -0.24
COL4A3-201ENST00000304990 KCNQ3O43525 872 aa13.54□□□□□ -0.24
COL4A3-201ENST00000304990 CC2D2BQ6DHV5 1058 aa13.54□□□□□ -0.24
COL4A3-201ENST00000304990 NIM1KQ8IY84 436 aa13.54□□□□□ -0.24
COL4A3-201ENST00000304990 RPGRQ92834 1020 aaKnown RBP13.54□□□□□ -0.24
COL4A3-201ENST00000304990 TMX4Q9H1E5 349 aaPredicted RBP13.54□□□□□ -0.24
COL4A3-201ENST00000304990 USP16Q9Y5T5 823 aa13.54□□□□□ -0.24
COL4A3-201ENST00000304990 KLRG2A4D1S0 409 aaPredicted RBP13.53□□□□□ -0.24
COL4A3-201ENST00000304990 CNGB1Q14028 1251 aaPredicted RBP13.53□□□□□ -0.24
COL4A3-201ENST00000304990 CST9Q5W186 159 aa13.53□□□□□ -0.24
COL4A3-201ENST00000304990 ZNF408Q9H9D4 720 aa13.53□□□□□ -0.24
COL4A3-201ENST00000304990 TCERG1O14776 1098 aaKnown RBP13.52□□□□□ -0.25
COL4A3-201ENST00000304990 CELF2O95319 508 aaKnown RBP13.52□□□□□ -0.25
COL4A3-201ENST00000304990 SNRPA1P09661 255 aaKnown RBP13.52□□□□□ -0.25
COL4A3-201ENST00000304990 SCNN1DP51172 638 aa13.52□□□□□ -0.25
COL4A3-201ENST00000304990 CC2D1BQ5T0F9 858 aaKnown RBP13.52□□□□□ -0.25
COL4A3-201ENST00000304990 NYXQ9GZU5 481 aa13.52□□□□□ -0.25
COL4A3-201ENST00000304990 PRAMEF22A3QJZ6 481 aa13.51□□□□□ -0.25
COL4A3-201ENST00000304990 GRIPAP1Q4V328 841 aa13.51□□□□□ -0.25
COL4A3-201ENST00000304990 AMER1Q5JTC6 1135 aaPredicted RBP13.51□□□□□ -0.25
COL4A3-201ENST00000304990 ADARB2Q9NS39 739 aaKnown RBP13.51□□□□□ -0.25
COL4A3-201ENST00000304990 CLSPNQ9HAW4 1339 aa13.5□□□□□ -0.25
COL4A3-201ENST00000304990 PPIP5K2O43314 1243 aa13.5□□□□□ -0.25
COL4A3-201ENST00000304990 BRPF1P55201 1214 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-201ENST00000304990 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
COL4A3-201ENST00000304990 NGEFQ8N5V2 710 aa13.5□□□□□ -0.25
COL4A3-201ENST00000304990 RTF1Q92541 710 aaKnown RBP13.5□□□□□ -0.25
COL4A3-201ENST00000304990 COL4A5P29400 1685 aa13.5□□□□□ -0.25
COL4A3-201ENST00000304990 PPEF1O14829 653 aaPredicted RBP13.49□□□□□ -0.25
COL4A3-201ENST00000304990 RGL2O15211 777 aa13.49□□□□□ -0.25
COL4A3-201ENST00000304990 CIAPIN1Q6FI81 312 aa13.49□□□□□ -0.25
COL4A3-201ENST00000304990 SAPCD2Q86UD0 394 aa13.49□□□□□ -0.25
COL4A3-201ENST00000304990 RBM17Q96I25 401 aaKnown RBP13.49□□□□□ -0.25
COL4A3-201ENST00000304990 NUP98P52948 1817 aa13.48□□□□□ -0.25
COL4A3-201ENST00000304990 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
COL4A3-201ENST00000304990 HLFQ16534 295 aa13.48□□□□□ -0.25
COL4A3-201ENST00000304990 BCL2L13Q9BXK5 485 aa13.48□□□□□ -0.25
COL4A3-201ENST00000304990 GLIS2Q9BZE0 524 aaPredicted RBP13.48□□□□□ -0.25
COL4A3-201ENST00000304990 GPRC5DQ9NZD1 345 aa13.48□□□□□ -0.25
COL4A3-201ENST00000304990 ABCC12Q96J65 1359 aa13.47□□□□□ -0.25
COL4A3-201ENST00000304990 NBPF26B4DH59 902 aa13.47□□□□□ -0.25
COL4A3-201ENST00000304990 PRKAR2BP31323 418 aa13.47□□□□□ -0.25
COL4A3-201ENST00000304990 AOC3Q16853 763 aa13.47□□□□□ -0.25
COL4A3-201ENST00000304990 NBPF10Q6P3W6 841 aaKnown RBP13.47□□□□□ -0.25
COL4A3-201ENST00000304990 KIF6Q6ZMV9 814 aa13.47□□□□□ -0.25
COL4A3-201ENST00000304990 NBPF15Q8N660 670 aa13.47□□□□□ -0.25
COL4A3-201ENST00000304990 HHIPL1Q96JK4 782 aa13.47□□□□□ -0.25
COL4A3-201ENST00000304990 LAMB4A4D0S4 1761 aa13.47□□□□□ -0.25
COL4A3-201ENST00000304990 SOX10P56693 466 aa13.46□□□□□ -0.25
COL4A3-201ENST00000304990 NOGQ13253 232 aa13.46□□□□□ -0.25
COL4A3-201ENST00000304990 CRY2Q49AN0 593 aa13.46□□□□□ -0.25
COL4A3-201ENST00000304990 SUPT20HQ8NEM7 779 aa13.46□□□□□ -0.25
COL4A3-201ENST00000304990 SNED1Q8TER0 1413 aa13.46□□□□□ -0.26
COL4A3-201ENST00000304990 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
COL4A3-201ENST00000304990 GPTP24298 496 aa13.45□□□□□ -0.26
COL4A3-201ENST00000304990 GMPSP49915 693 aaPredicted RBP13.45□□□□□ -0.26
COL4A3-201ENST00000304990 CDC37L1Q7L3B6 337 aa13.45□□□□□ -0.26
COL4A3-201ENST00000304990 MCM10Q7L590 875 aa13.45□□□□□ -0.26
COL4A3-201ENST00000304990 CRAMP1Q96RY5 1269 aa13.45□□□□□ -0.26
COL4A3-201ENST00000304990 ZNRF3Q9ULT6 936 aa13.45□□□□□ -0.26
COL4A3-201ENST00000304990 COL3A1P02461 1466 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-201ENST00000304990 HOXA10P31260 410 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-201ENST00000304990 HUNKP57058 714 aa13.44□□□□□ -0.26
COL4A3-201ENST00000304990 PHACTR3Q96KR7 559 aa13.44□□□□□ -0.26
COL4A3-201ENST00000304990 CFAP53Q96M91 514 aa13.44□□□□□ -0.26
COL4A3-201ENST00000304990 KIF7Q2M1P5 1343 aa13.43□□□□□ -0.26
COL4A3-201ENST00000304990 AKAP11Q9UKA4 1901 aa13.43□□□□□ -0.26
COL4A3-201ENST00000304990 CXCL9Q07325 125 aa13.43□□□□□ -0.26
COL4A3-201ENST00000304990 TNIP1Q15025 636 aa13.43□□□□□ -0.26
COL4A3-201ENST00000304990 ZC3H15Q8WU90 426 aaKnown RBP13.43□□□□□ -0.26
COL4A3-201ENST00000304990 VPS33BQ9H267 617 aa13.43□□□□□ -0.26
COL4A3-201ENST00000304990 NUDCQ9Y266 331 aa13.43□□□□□ -0.26
COL4A3-201ENST00000304990 RRP7AQ9Y3A4 280 aaKnown RBP13.43□□□□□ -0.26
COL4A3-201ENST00000304990 MAP3K15Q6ZN16 1313 aa13.42□□□□□ -0.26
COL4A3-201ENST00000304990 RIC1Q4ADV7 1423 aa13.42□□□□□ -0.26
COL4A3-201ENST00000304990 ERVV-1B6SEH8 477 aa13.42□□□□□ -0.26
COL4A3-201ENST00000304990 H7C1D1 291 aa13.42□□□□□ -0.26
COL4A3-201ENST00000304990 DSG3P32926 999 aa13.42□□□□□ -0.26
COL4A3-201ENST00000304990 SUSD4Q5VX71 490 aa13.42□□□□□ -0.26
COL4A3-201ENST00000304990 DPP8Q6V1X1 898 aaPredicted RBP13.42□□□□□ -0.26
COL4A3-201ENST00000304990 NLRP3Q96P20 1036 aa13.42□□□□□ -0.26
COL4A3-201ENST00000304990 ZBTB3Q9H5J0 574 aa13.42□□□□□ -0.26
COL4A3-201ENST00000304990 CDHR2Q9BYE9 1310 aa13.41□□□□□ -0.26
COL4A3-201ENST00000304990 RAD17O75943 681 aa13.41□□□□□ -0.26
COL4A3-201ENST00000304990 MYL6BP14649 208 aa13.41□□□□□ -0.26
COL4A3-201ENST00000304990 DCTN1Q14203 1278 aa13.41□□□□□ -0.26
COL4A3-201ENST00000304990 PPP1R42Q7Z4L9 355 aa13.41□□□□□ -0.26
COL4A3-201ENST00000304990 USP48Q86UV5 1035 aa13.41□□□□□ -0.26
COL4A3-201ENST00000304990 SLC51AQ86UW1 340 aa13.41□□□□□ -0.26
COL4A3-201ENST00000304990 RSPH6AQ9H0K4 717 aa13.41□□□□□ -0.26
COL4A3-201ENST00000304990 ATP6V0A2Q9Y487 856 aa13.41□□□□□ -0.26
COL4A3-201ENST00000304990 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-201ENST00000304990 U2AF1L5P0DN76 240 aaPredicted RBP13.4□□□□□ -0.26
COL4A3-201ENST00000304990 U2AF1Q01081 240 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL4A3-201ENST00000304990 PRPF38BQ5VTL8 546 aaKnown RBP13.4□□□□□ -0.26
COL4A3-201ENST00000304990 RGMBQ6NW40 437 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms