RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 DOT1LQ8TEK3 1739 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 RABL6Q3YEC7 729 aaPredicted RBP8.73□□□□□ -1.01
RGPD3-201ENST00000304514 CAVIN1Q6NZI2 390 aaKnown RBP8.73□□□□□ -1.01
RGPD3-201ENST00000304514 C9orf78Q9NZ63 289 aaPredicted RBP8.73□□□□□ -1.01
RGPD3-201ENST00000304514 TMEM63CQ9P1W3 806 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 DCAF5Q96JK2 942 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 RBSNQ9H1K0 784 aa8.73□□□□□ -1.01
RGPD3-201ENST00000304514 ALDH8A1Q9H2A2 487 aaPredicted RBP8.73□□□□□ -1.01
RGPD3-201ENST00000304514 VPS53Q5VIR6 699 aa8.72□□□□□ -1.01
RGPD3-201ENST00000304514 AACSQ86V21 672 aa8.72□□□□□ -1.01
RGPD3-201ENST00000304514 EAF2Q96CJ1 260 aaPredicted RBP8.72□□□□□ -1.01
RGPD3-201ENST00000304514 ZC3H6P61129 1189 aaKnown RBP8.72□□□□□ -1.01
RGPD3-201ENST00000304514 IFNL2Q8IZJ0 200 aa8.72□□□□□ -1.01
RGPD3-201ENST00000304514 ROBO1Q9Y6N7 1651 aa8.72□□□□□ -1.01
RGPD3-201ENST00000304514 BCORQ6W2J9 1755 aa8.72□□□□□ -1.01
RGPD3-201ENST00000304514 DDX58O95786 925 aaKnown RBP8.72□□□□□ -1.01
RGPD3-201ENST00000304514 TATP17735 454 aaPredicted RBP8.72□□□□□ -1.01
RGPD3-201ENST00000304514 ADCK5Q3MIX3 580 aa8.72□□□□□ -1.01
RGPD3-201ENST00000304514 LRSAM1Q6UWE0 723 aa8.72□□□□□ -1.01
RGPD3-201ENST00000304514 NMIQ13287 307 aaPredicted RBP8.72□□□□□ -1.01
RGPD3-201ENST00000304514 UPF3BQ9BZI7 483 aaKnown RBP8.72□□□□□ -1.01
RGPD3-201ENST00000304514 CCDC171Q6TFL3 1326 aa8.72□□□□□ -1.01
RGPD3-201ENST00000304514 LARP1Q6PKG0 1096 aaKnown RBP8.71□□□□□ -1.01
RGPD3-201ENST00000304514 XAGE3Q8WTP9 111 aa8.71□□□□□ -1.01
RGPD3-201ENST00000304514 ZNF496Q96IT1 587 aaPredicted RBP8.71□□□□□ -1.01
RGPD3-201ENST00000304514 TM6SF1Q9BZW5 370 aa8.71□□□□□ -1.01
RGPD3-201ENST00000304514 NASPP49321 788 aaPredicted RBP8.71□□□□□ -1.01
RGPD3-201ENST00000304514 GPATCH3Q96I76 525 aa8.71□□□□□ -1.01
RGPD3-201ENST00000304514 ZNF609O15014 1411 aa8.71□□□□□ -1.01
RGPD3-201ENST00000304514 NUP98P52948 1817 aa8.71□□□□□ -1.01
RGPD3-201ENST00000304514 PRIM1P49642 420 aaKnown RBP8.71□□□□□ -1.02
RGPD3-201ENST00000304514 MAP4K1Q92918 833 aa8.71□□□□□ -1.02
RGPD3-201ENST00000304514 MYD88Q99836 296 aa8.71□□□□□ -1.02
RGPD3-201ENST00000304514 CLASRPQ8N2M8 674 aaKnown RBP8.71□□□□□ -1.02
RGPD3-201ENST00000304514 PDLIM2Q96JY6 352 aa8.71□□□□□ -1.02
RGPD3-201ENST00000304514 IFIT2P09913 472 aaKnown RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 CASTP20810 708 aaKnown RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 FOXO4P98177 505 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 FAM227BQ96M60 508 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 SNRPA1P09661 255 aaKnown RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 MYL6BP14649 208 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 COL9A3Q14050 684 aaPredicted RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 NOL8Q76FK4 1167 aaKnown RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 RAPGEF4Q8WZA2 1011 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 HDAC5Q9UQL6 1122 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 COL5A3P25940 1745 aaPredicted RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 A0A0D9SFI3 127 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 GADD45BO75293 160 aaPredicted RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 AIMP1Q12904 312 aaKnown RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 COPRSQ9NQ92 184 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 LIMCH1Q9UPQ0 1083 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 WDR33Q9C0J8 1336 aaKnown RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 SLC27A2O14975 620 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 ATF3P18847 181 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 PTPN12Q05209 780 aaKnown RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 OS9Q13438 667 aaPredicted RBP8.7□□□□□ -1.02
RGPD3-201ENST00000304514 CABLES1Q8TDN4 633 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 SLIT2O94813 1529 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 PALLDQ8WX93 1383 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 AKAP11Q9UKA4 1901 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 CREB3L3Q68CJ9 461 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 COPS6Q7L5N1 327 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 KLHDC4Q8TBB5 520 aa8.7□□□□□ -1.02
RGPD3-201ENST00000304514 PCDH11XQ9BZA7 1347 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 PCDH11YQ9BZA8 1340 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 HIP1O00291 1037 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 ZSCAN22P10073 491 aaPredicted RBP8.69□□□□□ -1.02
RGPD3-201ENST00000304514 CPA1P15085 419 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 PRPF40BQ6NWY9 871 aaKnown RBP8.69□□□□□ -1.02
RGPD3-201ENST00000304514 LMOD2Q6P5Q4 547 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 USP48Q86UV5 1035 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 ANO8Q9HCE9 1232 aaPredicted RBP8.69□□□□□ -1.02
RGPD3-201ENST00000304514 DIAPH3Q9NSV4 1193 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 NKX1-1Q15270 411 aaPredicted RBP8.69□□□□□ -1.02
RGPD3-201ENST00000304514 TSGA10IPQ3SY00 556 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 USPL1Q5W0Q7 1092 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 RUFY2Q8WXA3 655 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 NLRP2Q9NX02 1062 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 USP16Q9Y5T5 823 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 CHD4Q14839 1912 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 MYO5AQ9Y4I1 1855 aaKnown RBP8.69□□□□□ -1.02
RGPD3-201ENST00000304514 FOXD4L5Q5VV16 416 aaPredicted RBP8.69□□□□□ -1.02
RGPD3-201ENST00000304514 FOXD4L4Q8WXT5 416 aaPredicted RBP8.69□□□□□ -1.02
RGPD3-201ENST00000304514 TNNI3KQ59H18 835 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 ZNF589Q86UQ0 364 aaPredicted RBP8.69□□□□□ -1.02
RGPD3-201ENST00000304514 PLBD2Q8NHP8 589 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 PDRG1Q9NUG6 133 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 FPGT-TNNI3KV9GXZ4 949 aa8.69□□□□□ -1.02
RGPD3-201ENST00000304514 WDR17Q8IZU2 1322 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 NBPF26B4DH59 902 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 MBD3O95983 291 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 NBPF14Q5TI25 921 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 NBPF10Q6P3W6 841 aaKnown RBP8.68□□□□□ -1.02
RGPD3-201ENST00000304514 BRINP3Q76B58 766 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 NBPF15Q8N660 670 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 CCDC8Q9H0W5 538 aaPredicted RBP8.68□□□□□ -1.02
RGPD3-201ENST00000304514 RBM8AQ9Y5S9 174 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms