RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 PPFIA3O75145 1194 aa16.27■□□□□ 0.2
HIPK3-201ENST00000303296 WWC3Q9ULE0 1092 aa16.27■□□□□ 0.2
HIPK3-201ENST00000303296 KIF2AO00139 706 aaPredicted RBP16.27■□□□□ 0.19
HIPK3-201ENST00000303296 PLVAPQ9BX97 442 aa16.27■□□□□ 0.19
HIPK3-201ENST00000303296 PRKRIP1Q9H875 184 aaPredicted RBP16.27■□□□□ 0.19
HIPK3-201ENST00000303296 FAM114A2Q9NRY5 505 aa16.27■□□□□ 0.19
HIPK3-201ENST00000303296 PPP2R5DQ14738 602 aa16.27■□□□□ 0.19
HIPK3-201ENST00000303296 DDX12PQ92771 950 aa16.27■□□□□ 0.19
HIPK3-201ENST00000303296 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.19
HIPK3-201ENST00000303296 RSPH14Q9UHP6 348 aa16.27■□□□□ 0.19
HIPK3-201ENST00000303296 PPP1R21Q6ZMI0 780 aa16.27■□□□□ 0.19
HIPK3-201ENST00000303296 MAK16Q9BXY0 300 aaKnown RBP16.27■□□□□ 0.19
HIPK3-201ENST00000303296 TTC12Q9H892 705 aaPredicted RBP16.27■□□□□ 0.19
HIPK3-201ENST00000303296 CCDC196A0A1B0GTZ2 297 aa16.26■□□□□ 0.19
HIPK3-201ENST00000303296 HSP90AA4PQ58FG1 418 aa16.26■□□□□ 0.19
HIPK3-201ENST00000303296 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
HIPK3-201ENST00000303296 SEPT8Q92599 483 aa16.26■□□□□ 0.19
HIPK3-201ENST00000303296 SELENOOQ9BVL4 669 aa16.26■□□□□ 0.19
HIPK3-201ENST00000303296 RASAL2Q9UJF2 1139 aa16.26■□□□□ 0.19
HIPK3-201ENST00000303296 ZFYP08048 801 aaPredicted RBP16.26■□□□□ 0.19
HIPK3-201ENST00000303296 PHAXQ9H814 394 aaKnown RBP16.26■□□□□ 0.19
HIPK3-201ENST00000303296 CACYBPQ9HB71 228 aaKnown RBP16.26■□□□□ 0.19
HIPK3-201ENST00000303296 STARD3NLO95772 234 aa16.26■□□□□ 0.19
HIPK3-201ENST00000303296 TBCAO75347 108 aaKnown RBP16.26■□□□□ 0.19
HIPK3-201ENST00000303296 ZNF213O14771 459 aa16.25■□□□□ 0.19
HIPK3-201ENST00000303296 HSPA1LP34931 641 aa16.25■□□□□ 0.19
HIPK3-201ENST00000303296 DNAJC21Q5F1R6 531 aaKnown RBP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 AFG3L2Q9Y4W6 797 aa16.25■□□□□ 0.19
HIPK3-201ENST00000303296 RIOK3O14730 519 aaKnown RBP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 TTF1Q15361 905 aaPredicted RBP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 DHX57Q6P158 1386 aaKnown RBP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 RRP9O43818 475 aaKnown RBP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 PRR16Q569H4 304 aa16.25■□□□□ 0.19
HIPK3-201ENST00000303296 EXOC1Q9NV70 894 aa16.25■□□□□ 0.19
HIPK3-201ENST00000303296 NCBP1Q09161 790 aaKnown RBP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 EP400NLQ6ZTU2 488 aa16.25■□□□□ 0.19
HIPK3-201ENST00000303296 NOP9Q86U38 636 aaKnown RBP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 MICALL1Q8N3F8 863 aa16.25■□□□□ 0.19
HIPK3-201ENST00000303296 ZNF622Q969S3 477 aaKnown RBP eCLIP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 CCDC114Q96M63 670 aa16.25■□□□□ 0.19
HIPK3-201ENST00000303296 RAB11FIP4Q86YS3 637 aa16.25■□□□□ 0.19
HIPK3-201ENST00000303296 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 IFIT1P09914 478 aaKnown RBP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 PPANQ9NQ55 473 aaKnown RBP16.25■□□□□ 0.19
HIPK3-201ENST00000303296 C11orf95C9JLR9 678 aaPredicted RBP16.24■□□□□ 0.19
HIPK3-201ENST00000303296 MRRFQ96E11 262 aaKnown RBP16.24■□□□□ 0.19
HIPK3-201ENST00000303296 CNTLNQ9NXG0 1405 aa16.24■□□□□ 0.19
HIPK3-201ENST00000303296 PPP4R4Q6NUP7 873 aa16.24■□□□□ 0.19
HIPK3-201ENST00000303296 SWAP70Q9UH65 585 aa16.24■□□□□ 0.19
HIPK3-201ENST00000303296 ESPNB1AK53 854 aa16.24■□□□□ 0.19
HIPK3-201ENST00000303296 MCM6Q14566 821 aa16.24■□□□□ 0.19
HIPK3-201ENST00000303296 SNW1Q13573 536 aaKnown RBP16.23■□□□□ 0.19
HIPK3-201ENST00000303296 FSIP1Q8NA03 581 aa16.23■□□□□ 0.19
HIPK3-201ENST00000303296 PRPF40BQ6NWY9 871 aaKnown RBP16.23■□□□□ 0.19
HIPK3-201ENST00000303296 TRIM47Q96LD4 638 aa16.23■□□□□ 0.19
HIPK3-201ENST00000303296 CABP5Q9NP86 173 aa16.23■□□□□ 0.19
HIPK3-201ENST00000303296 DDX27Q96GQ7 796 aaKnown RBP16.23■□□□□ 0.19
HIPK3-201ENST00000303296 STIM2Q9P246 746 aa16.23■□□□□ 0.19
HIPK3-201ENST00000303296 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
HIPK3-201ENST00000303296 ZBTB21Q9ULJ3 1066 aa16.23■□□□□ 0.19
HIPK3-201ENST00000303296 POTEB2H3BUK9 544 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 MAP3K12Q12852 859 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 ATP2A1O14983 1001 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 NUF2Q9BZD4 464 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 ZEB2O60315 1214 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 CCDC172P0C7W6 258 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 UBA7P41226 1012 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 CCDC183Q5T5S1 534 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 IMPG2Q9BZV3 1241 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 CHD1LQ86WJ1 897 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 RNF34Q969K3 372 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 AKAP2Q9Y2D5 859 aa16.22■□□□□ 0.19
HIPK3-201ENST00000303296 TSPY2A6NKD2 308 aa16.21■□□□□ 0.19
HIPK3-201ENST00000303296 FAM13AO94988 1023 aa16.21■□□□□ 0.19
HIPK3-201ENST00000303296 CEP85LQ5SZL2 805 aa16.21■□□□□ 0.19
HIPK3-201ENST00000303296 TCP11L2Q8N4U5 519 aa16.21■□□□□ 0.19
HIPK3-201ENST00000303296 TBC1D31Q96DN5 1066 aa16.21■□□□□ 0.19
HIPK3-201ENST00000303296 GNG11P61952 73 aa16.21■□□□□ 0.19
HIPK3-201ENST00000303296 SETDB1Q15047 1291 aa16.21■□□□□ 0.19
HIPK3-201ENST00000303296 KMT5BQ4FZB7 885 aa16.21■□□□□ 0.19
HIPK3-201ENST00000303296 CCDC121Q6ZUS5 278 aa16.21■□□□□ 0.19
HIPK3-201ENST00000303296 ZNF710Q8N1W2 664 aa16.21■□□□□ 0.19
HIPK3-201ENST00000303296 STMN2Q93045 179 aa16.21■□□□□ 0.18
HIPK3-201ENST00000303296 CCDC77Q9BR77 488 aa16.21■□□□□ 0.18
HIPK3-201ENST00000303296 KAT14Q9H8E8 782 aa16.21■□□□□ 0.18
HIPK3-201ENST00000303296 SLF2Q8IX21 1173 aa16.21■□□□□ 0.18
HIPK3-201ENST00000303296 KIAA1524Q8TCG1 905 aa16.21■□□□□ 0.18
HIPK3-201ENST00000303296 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.18
HIPK3-201ENST00000303296 FCHSD2O94868 740 aa16.2■□□□□ 0.18
HIPK3-201ENST00000303296 GNL1P36915 607 aaPredicted RBP16.2■□□□□ 0.18
HIPK3-201ENST00000303296 AKR1B10O60218 316 aa16.2■□□□□ 0.18
HIPK3-201ENST00000303296 KIF5BP33176 963 aa16.2■□□□□ 0.18
HIPK3-201ENST00000303296 TLDC2A0PJX2 215 aa16.2■□□□□ 0.18
HIPK3-201ENST00000303296 CASQ2O14958 399 aaPredicted RBP16.2■□□□□ 0.18
HIPK3-201ENST00000303296 CALM1P0DP23 149 aa16.2■□□□□ 0.18
HIPK3-201ENST00000303296 CALM2P0DP24 149 aa16.2■□□□□ 0.18
HIPK3-201ENST00000303296 CALM3P0DP25 149 aa16.2■□□□□ 0.18
HIPK3-201ENST00000303296 AFMP43652 599 aa16.2■□□□□ 0.18
HIPK3-201ENST00000303296 ADAMTS8Q9UP79 889 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms