RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 AKAP17AQ02040 695 aaKnown RBP14.21□□□□□ -0.13
PDGFD-201ENST00000302251 EIF4A2Q14240 407 aaKnown RBP14.21□□□□□ -0.13
PDGFD-201ENST00000302251 BRF1Q92994 677 aa14.21□□□□□ -0.13
PDGFD-201ENST00000302251 DNAI1Q9UI46 699 aa14.21□□□□□ -0.13
PDGFD-201ENST00000302251 USP16Q9Y5T5 823 aa14.21□□□□□ -0.13
PDGFD-201ENST00000302251 DNAAF4Q8WXU2 420 aa14.21□□□□□ -0.13
PDGFD-201ENST00000302251 BTBD11A6QL63 1104 aa14.21□□□□□ -0.13
PDGFD-201ENST00000302251 CWC15Q9P013 229 aaKnown RBP14.21□□□□□ -0.13
PDGFD-201ENST00000302251 TAF3Q5VWG9 929 aa14.2□□□□□ -0.14
PDGFD-201ENST00000302251 CPLX3Q8WVH0 158 aa14.2□□□□□ -0.14
PDGFD-201ENST00000302251 CCDC102AQ96A19 550 aa14.2□□□□□ -0.14
PDGFD-201ENST00000302251 CCDC69A6NI79 296 aa14.2□□□□□ -0.14
PDGFD-201ENST00000302251 AOPEPQ8N6M6 819 aa14.2□□□□□ -0.14
PDGFD-201ENST00000302251 CHMP4CQ96CF2 233 aa14.2□□□□□ -0.14
PDGFD-201ENST00000302251 TIGD1Q96MW7 591 aa14.2□□□□□ -0.14
PDGFD-201ENST00000302251 RRP12Q5JTH9 1297 aaKnown RBP14.2□□□□□ -0.14
PDGFD-201ENST00000302251 MPRIPQ6WCQ1 1025 aa14.2□□□□□ -0.14
PDGFD-201ENST00000302251 PHAXQ9H814 394 aaKnown RBP14.2□□□□□ -0.14
PDGFD-201ENST00000302251 CALCOCO1Q9P1Z2 691 aa14.2□□□□□ -0.14
PDGFD-201ENST00000302251 UNC5CLQ8IV45 518 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 CCDC82Q8N4S0 544 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 AK7Q96M32 723 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 SNX14Q9Y5W7 946 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 FAM193AP78312 1265 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 NLRP2Q9NX02 1062 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 OGFRQ9NZT2 677 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 NRBP1Q9UHY1 535 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 HOOK1Q9UJC3 728 aaKnown RBP14.19□□□□□ -0.14
PDGFD-201ENST00000302251 CD163L1Q9NR16 1453 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 CD109Q6YHK3 1445 aa14.19□□□□□ -0.14
PDGFD-201ENST00000302251 LMOD1P29536 600 aaPredicted RBP14.18□□□□□ -0.14
PDGFD-201ENST00000302251 MTHFSDQ2M296 383 aaKnown RBP14.18□□□□□ -0.14
PDGFD-201ENST00000302251 SYT10Q6XYQ8 523 aa14.18□□□□□ -0.14
PDGFD-201ENST00000302251 CHST3Q7LGC8 479 aa14.18□□□□□ -0.14
PDGFD-201ENST00000302251 CBX8Q9HC52 389 aa14.18□□□□□ -0.14
PDGFD-201ENST00000302251 SMTNL1A8MU46 457 aa14.18□□□□□ -0.14
PDGFD-201ENST00000302251 IPO7O95373 1038 aaKnown RBP14.18□□□□□ -0.14
PDGFD-201ENST00000302251 BMS1Q14692 1282 aaKnown RBP14.18□□□□□ -0.14
PDGFD-201ENST00000302251 SAFBQ15424 915 aaKnown RBP eCLIP14.18□□□□□ -0.14
PDGFD-201ENST00000302251 AXDND1Q5T1B0 1012 aaPredicted RBP14.18□□□□□ -0.14
PDGFD-201ENST00000302251 LIG1P18858 919 aa14.18□□□□□ -0.14
PDGFD-201ENST00000302251 IL13P35225 146 aa14.18□□□□□ -0.14
PDGFD-201ENST00000302251 NOM1Q5C9Z4 860 aaKnown RBP14.18□□□□□ -0.14
PDGFD-201ENST00000302251 KLHL10Q6JEL2 608 aa14.18□□□□□ -0.14
PDGFD-201ENST00000302251 ELF2Q15723 593 aa14.17□□□□□ -0.14
PDGFD-201ENST00000302251 STX1AQ16623 288 aa14.17□□□□□ -0.14
PDGFD-201ENST00000302251 LARP1Q6PKG0 1096 aaKnown RBP14.17□□□□□ -0.14
PDGFD-201ENST00000302251 LMAN1P49257 510 aa14.17□□□□□ -0.14
PDGFD-201ENST00000302251 KRT32Q14532 448 aa14.17□□□□□ -0.14
PDGFD-201ENST00000302251 DHX37Q8IY37 1157 aaKnown RBP14.17□□□□□ -0.14
PDGFD-201ENST00000302251 ZDHHC9Q9Y397 364 aa14.17□□□□□ -0.14
PDGFD-201ENST00000302251 KIF20AO95235 890 aa14.17□□□□□ -0.14
PDGFD-201ENST00000302251 HAND2P61296 217 aa14.17□□□□□ -0.14
PDGFD-201ENST00000302251 EVI5LQ96CN4 794 aa14.17□□□□□ -0.14
PDGFD-201ENST00000302251 SLU7O95391 586 aaKnown RBP14.16□□□□□ -0.14
PDGFD-201ENST00000302251 ARHGAP29Q52LW3 1261 aa14.16□□□□□ -0.14
PDGFD-201ENST00000302251 SLC3A2P08195 630 aaKnown RBP14.16□□□□□ -0.14
PDGFD-201ENST00000302251 TOP1P11387 765 aaKnown RBP14.16□□□□□ -0.14
PDGFD-201ENST00000302251 GNG11P61952 73 aa14.16□□□□□ -0.14
PDGFD-201ENST00000302251 NEK1Q96PY6 1258 aa14.16□□□□□ -0.14
PDGFD-201ENST00000302251 FEZ1Q99689 392 aa14.16□□□□□ -0.14
PDGFD-201ENST00000302251 A0A087WWV3 80 aa14.16□□□□□ -0.14
PDGFD-201ENST00000302251 CCP110O43303 1012 aa14.16□□□□□ -0.14
PDGFD-201ENST00000302251 DDX46Q7L014 1031 aaKnown RBP14.16□□□□□ -0.14
PDGFD-201ENST00000302251 PATL2C9JE40 543 aaKnown RBP14.15□□□□□ -0.14
PDGFD-201ENST00000302251 CDC37L1Q7L3B6 337 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 CAGE1Q8TC20 777 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 CHPF2Q9P2E5 772 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 MTMR7Q9Y216 660 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 MAP3K2Q9Y2U5 619 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 ABCC4O15439 1325 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 NRXN3Q9Y4C0 1643 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 NMIQ13287 307 aaPredicted RBP14.15□□□□□ -0.14
PDGFD-201ENST00000302251 NAA30Q147X3 362 aaPredicted RBP14.15□□□□□ -0.14
PDGFD-201ENST00000302251 ACEP12821 1306 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 KIF2AO00139 706 aaPredicted RBP14.15□□□□□ -0.14
PDGFD-201ENST00000302251 DHX16O60231 1041 aaKnown RBP14.15□□□□□ -0.14
PDGFD-201ENST00000302251 RASEFQ8IZ41 740 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 RNF216Q9NWF9 866 aaPredicted RBP14.15□□□□□ -0.14
PDGFD-201ENST00000302251 NAP1L1P55209 391 aaKnown RBP14.15□□□□□ -0.14
PDGFD-201ENST00000302251 MCM6Q14566 821 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 LRRFIP1Q32MZ4 808 aaKnown RBP14.15□□□□□ -0.14
PDGFD-201ENST00000302251 CREB3L3Q68CJ9 461 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 PPFIBP1Q86W92 1011 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 RAPGEF4Q8WZA2 1011 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 C8orf76Q96K31 380 aa14.15□□□□□ -0.14
PDGFD-201ENST00000302251 H0YHG0 523 aa14.14□□□□□ -0.15
PDGFD-201ENST00000302251 ANKRD20A12PQ8NF67 263 aa14.14□□□□□ -0.15
PDGFD-201ENST00000302251 ZMYM3Q14202 1370 aa14.14□□□□□ -0.15
PDGFD-201ENST00000302251 ATP2B3Q16720 1220 aa14.14□□□□□ -0.15
PDGFD-201ENST00000302251 ZNF397Q8NF99 534 aaPredicted RBP14.14□□□□□ -0.15
PDGFD-201ENST00000302251 SNRKQ9NRH2 765 aa14.14□□□□□ -0.15
PDGFD-201ENST00000302251 NEMFO60524 1076 aa14.14□□□□□ -0.15
PDGFD-201ENST00000302251 IBSPP21815 317 aaPredicted RBP14.14□□□□□ -0.15
PDGFD-201ENST00000302251 PLEKHO1Q53GL0 409 aaPredicted RBP14.14□□□□□ -0.15
PDGFD-201ENST00000302251 Q6ZUG5 572 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms