RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 DBNDD2Q9BQY9 259 aa17.65■□□□□ 0.42
SMG8-201ENST00000300917 AK9Q5TCS8 1911 aa17.65■□□□□ 0.42
SMG8-201ENST00000300917 PRPF40BQ6NWY9 871 aaKnown RBP17.65■□□□□ 0.42
SMG8-201ENST00000300917 FAM89AQ96GI7 184 aa17.65■□□□□ 0.42
SMG8-201ENST00000300917 CRYBG1Q9Y4K1 1723 aa17.64■□□□□ 0.41
SMG8-201ENST00000300917 FAM177BA6PVY3 158 aa17.64■□□□□ 0.41
SMG8-201ENST00000300917 TIMM10P62072 90 aa17.64■□□□□ 0.41
SMG8-201ENST00000300917 NMIQ13287 307 aaPredicted RBP17.64■□□□□ 0.41
SMG8-201ENST00000300917 GBP4Q96PP9 640 aa17.64■□□□□ 0.41
SMG8-201ENST00000300917 DBNLQ9UJU6 430 aaKnown RBP17.64■□□□□ 0.41
SMG8-201ENST00000300917 NCLP19338 710 aaKnown RBP17.64■□□□□ 0.41
SMG8-201ENST00000300917 SLFNL1Q499Z3 407 aa17.64■□□□□ 0.41
SMG8-201ENST00000300917 MCTP1Q6DN14 999 aa17.64■□□□□ 0.41
SMG8-201ENST00000300917 LSG1Q9H089 658 aaKnown RBP17.64■□□□□ 0.41
SMG8-201ENST00000300917 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
SMG8-201ENST00000300917 RFX5P48382 616 aaPredicted RBP17.63■□□□□ 0.41
SMG8-201ENST00000300917 PRIM1P49642 420 aaKnown RBP17.63■□□□□ 0.41
SMG8-201ENST00000300917 NKX1-1Q15270 411 aaPredicted RBP17.63■□□□□ 0.41
SMG8-201ENST00000300917 LRRC24Q50LG9 513 aa17.63■□□□□ 0.41
SMG8-201ENST00000300917 CIZ1Q9ULV3 898 aaPredicted RBP17.63■□□□□ 0.41
SMG8-201ENST00000300917 SNX14Q9Y5W7 946 aa17.63■□□□□ 0.41
SMG8-201ENST00000300917 EXOC5O00471 708 aa17.62■□□□□ 0.41
SMG8-201ENST00000300917 TCEANC2Q96MN5 208 aa17.62■□□□□ 0.41
SMG8-201ENST00000300917 ADAMTS7Q9UKP4 1686 aa17.62■□□□□ 0.41
SMG8-201ENST00000300917 TNNI3KQ59H18 835 aa17.62■□□□□ 0.41
SMG8-201ENST00000300917 PUS3Q9BZE2 481 aaKnown RBP17.62■□□□□ 0.41
SMG8-201ENST00000300917 FPGT-TNNI3KV9GXZ4 949 aa17.62■□□□□ 0.41
SMG8-201ENST00000300917 A0A0D9SFI3 127 aa17.62■□□□□ 0.41
SMG8-201ENST00000300917 HSPA4P34932 840 aa17.62■□□□□ 0.41
SMG8-201ENST00000300917 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
SMG8-201ENST00000300917 EVI5LQ96CN4 794 aa17.62■□□□□ 0.41
SMG8-201ENST00000300917 COL9A3Q14050 684 aaPredicted RBP17.61■□□□□ 0.41
SMG8-201ENST00000300917 TBC1D2BQ9UPU7 963 aa17.61■□□□□ 0.41
SMG8-201ENST00000300917 RAD50Q92878 1312 aa17.61■□□□□ 0.41
SMG8-201ENST00000300917 CASTP20810 708 aaKnown RBP17.61■□□□□ 0.41
SMG8-201ENST00000300917 CASP7P55210 303 aa17.61■□□□□ 0.41
SMG8-201ENST00000300917 FOXO4P98177 505 aa17.61■□□□□ 0.41
SMG8-201ENST00000300917 ADCK5Q3MIX3 580 aa17.61■□□□□ 0.41
SMG8-201ENST00000300917 MRC1P22897 1456 aa17.61■□□□□ 0.41
SMG8-201ENST00000300917 DDX11L8A8MPP1 907 aa17.6■□□□□ 0.41
SMG8-201ENST00000300917 COPRSQ9NQ92 184 aa17.6■□□□□ 0.41
SMG8-201ENST00000300917 HLFQ16534 295 aa17.6■□□□□ 0.41
SMG8-201ENST00000300917 N4BP2Q86UW6 1770 aaPredicted RBP17.6■□□□□ 0.41
SMG8-201ENST00000300917 BAG4O95429 457 aaKnown RBP17.6■□□□□ 0.41
SMG8-201ENST00000300917 CCDC129Q6ZRS4 1044 aa17.6■□□□□ 0.41
SMG8-201ENST00000300917 JAKMIP1Q96N16 626 aaKnown RBP17.6■□□□□ 0.41
SMG8-201ENST00000300917 SLC4A9Q96Q91 983 aa17.6■□□□□ 0.41
SMG8-201ENST00000300917 SEC62Q99442 399 aaKnown RBP17.6■□□□□ 0.41
SMG8-201ENST00000300917 H7C1W4 665 aa17.59■□□□□ 0.41
SMG8-201ENST00000300917 RUFY2Q8WXA3 655 aa17.59■□□□□ 0.41
SMG8-201ENST00000300917 ZNF589Q86UQ0 364 aaPredicted RBP17.59■□□□□ 0.41
SMG8-201ENST00000300917 ZBTB1Q9Y2K1 713 aa17.59■□□□□ 0.41
SMG8-201ENST00000300917 USP42Q9H9J4 1324 aaKnown RBP17.58■□□□□ 0.41
SMG8-201ENST00000300917 PKD1L3Q7Z443 1732 aa17.58■□□□□ 0.41
SMG8-201ENST00000300917 KIF6Q6ZMV9 814 aa17.58■□□□□ 0.41
SMG8-201ENST00000300917 TAF6LQ9Y6J9 622 aa17.58■□□□□ 0.41
SMG8-201ENST00000300917 RABL6Q3YEC7 729 aaPredicted RBP17.58■□□□□ 0.4
SMG8-201ENST00000300917 STARD3NLO95772 234 aa17.57■□□□□ 0.4
SMG8-201ENST00000300917 ZDHHC9Q9Y397 364 aa17.57■□□□□ 0.4
SMG8-201ENST00000300917 RBM8AQ9Y5S9 174 aaKnown RBP17.57■□□□□ 0.4
SMG8-201ENST00000300917 AK2P54819 239 aa17.57■□□□□ 0.4
SMG8-201ENST00000300917 SNRKQ9NRH2 765 aa17.57■□□□□ 0.4
SMG8-201ENST00000300917 ANAPC15P60006 121 aa17.57■□□□□ 0.4
SMG8-201ENST00000300917 TAF7LQ5H9L4 462 aa17.57■□□□□ 0.4
SMG8-201ENST00000300917 DDX49Q9Y6V7 483 aaKnown RBP17.56■□□□□ 0.4
SMG8-201ENST00000300917 GOLIM4O00461 696 aa17.56■□□□□ 0.4
SMG8-201ENST00000300917 KCNQ4P56696 695 aa17.56■□□□□ 0.4
SMG8-201ENST00000300917 CCDC191Q8NCU4 936 aa17.56■□□□□ 0.4
SMG8-201ENST00000300917 NUCB2P80303 420 aa17.55■□□□□ 0.4
SMG8-201ENST00000300917 TCIRG1Q13488 830 aa17.55■□□□□ 0.4
SMG8-201ENST00000300917 KCPQ6ZWJ8 1503 aa17.55■□□□□ 0.4
SMG8-201ENST00000300917 GOLGA6L22H0YM25 854 aa17.55■□□□□ 0.4
SMG8-201ENST00000300917 PRPF40AO75400 957 aaKnown RBP17.55■□□□□ 0.4
SMG8-201ENST00000300917 ATG9AQ7Z3C6 839 aa17.55■□□□□ 0.4
SMG8-201ENST00000300917 CCDC171Q6TFL3 1326 aa17.55■□□□□ 0.4
SMG8-201ENST00000300917 LARGE1O95461 756 aa17.55■□□□□ 0.4
SMG8-201ENST00000300917 CCDC57Q2TAC2 916 aa17.55■□□□□ 0.4
SMG8-201ENST00000300917 ERBB4Q15303 1308 aa17.54■□□□□ 0.4
SMG8-201ENST00000300917 PANK2Q9BZ23 570 aa17.54■□□□□ 0.4
SMG8-201ENST00000300917 GDPD2Q9HCC8 539 aa17.54■□□□□ 0.4
SMG8-201ENST00000300917 PARP4Q9UKK3 1724 aaKnown RBP17.53■□□□□ 0.4
SMG8-201ENST00000300917 ABCC6O95255 1503 aa17.53■□□□□ 0.4
SMG8-201ENST00000300917 GOLGA6L3A6NEY3 463 aa17.53■□□□□ 0.4
SMG8-201ENST00000300917 DDB1Q16531 1140 aa17.53■□□□□ 0.4
SMG8-201ENST00000300917 RUFY3Q7L099 469 aa17.53■□□□□ 0.4
SMG8-201ENST00000300917 FKBP4Q02790 459 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMG8-201ENST00000300917 GORABQ5T7V8 394 aa17.53■□□□□ 0.4
SMG8-201ENST00000300917 CREB3L3Q68CJ9 461 aa17.53■□□□□ 0.4
SMG8-201ENST00000300917 NECAB1Q8N987 351 aa17.53■□□□□ 0.4
SMG8-201ENST00000300917 CWC22Q9HCG8 908 aaKnown RBP17.53■□□□□ 0.4
SMG8-201ENST00000300917 SMIM5Q71RC9 77 aa17.52■□□□□ 0.4
SMG8-201ENST00000300917 CCDC83Q8IWF9 413 aa17.52■□□□□ 0.4
SMG8-201ENST00000300917 HSP90AB3PQ58FF7 597 aa17.52■□□□□ 0.4
SMG8-201ENST00000300917 GLI3P10071 1580 aa17.52■□□□□ 0.39
SMG8-201ENST00000300917 AFDNP55196 1824 aaKnown RBP17.52■□□□□ 0.39
SMG8-201ENST00000300917 A0A1B0GUL7 405 aa17.52■□□□□ 0.39
SMG8-201ENST00000300917 EYA2O00167 538 aa17.52■□□□□ 0.39
SMG8-201ENST00000300917 ZKSCAN1P17029 563 aaPredicted RBP17.52■□□□□ 0.39
SMG8-201ENST00000300917 ADORA1P30542 326 aa17.52■□□□□ 0.39
SMG8-201ENST00000300917 PDRG1Q9NUG6 133 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms