RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 AOPEPQ8N6M6 819 aa12.9□□□□□ -0.34
SNX20-201ENST00000300590 RUFY2Q8WXA3 655 aa12.9□□□□□ -0.34
SNX20-201ENST00000300590 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.34
SNX20-201ENST00000300590 ARHGEF28Q8N1W1 1705 aaKnown RBP12.9□□□□□ -0.34
SNX20-201ENST00000300590 SMC2O95347 1197 aa12.9□□□□□ -0.34
SNX20-201ENST00000300590 PDCP20941 246 aa12.9□□□□□ -0.34
SNX20-201ENST00000300590 CCZ1BP86790 482 aa12.9□□□□□ -0.34
SNX20-201ENST00000300590 CCZ1P86791 482 aaPredicted RBP12.9□□□□□ -0.34
SNX20-201ENST00000300590 NBPF7P0C2Y1 421 aaPredicted RBP12.9□□□□□ -0.35
SNX20-201ENST00000300590 PNMA6AP0CW24 399 aaPredicted RBP12.9□□□□□ -0.35
SNX20-201ENST00000300590 CYP2C19P33261 490 aa12.9□□□□□ -0.35
SNX20-201ENST00000300590 GYS2P54840 703 aa12.9□□□□□ -0.35
SNX20-201ENST00000300590 RAD51AP2Q09MP3 1159 aa12.9□□□□□ -0.35
SNX20-201ENST00000300590 HSP90B1P14625 803 aaKnown RBP12.89□□□□□ -0.35
SNX20-201ENST00000300590 CCDC30Q5VVM6 783 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 FBXO31Q5XUX0 539 aaPredicted RBP12.89□□□□□ -0.35
SNX20-201ENST00000300590 CREB3L3Q68CJ9 461 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 BLOC1S2Q6QNY1 142 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 TXNDC2Q86VQ3 553 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 C10orf67Q8IYJ2 551 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 CCDC34Q96HJ3 373 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 CPSF1Q10570 1443 aaKnown RBP12.89□□□□□ -0.35
SNX20-201ENST00000300590 ANXA1P04083 346 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 ST5P78524 1137 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 IQCB1Q15051 598 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 KRBA2Q6ZNG9 492 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 UBXN4Q92575 508 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 LRRC2Q9BYS8 371 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 DNAI1Q9UI46 699 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 FHOD1Q9Y613 1164 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 PPLO60437 1756 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 ERBB3P21860 1342 aa12.89□□□□□ -0.35
SNX20-201ENST00000300590 RAPGEF3O95398 923 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 PLA2G4AP47712 749 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 GNL2Q13823 731 aaKnown RBP12.88□□□□□ -0.35
SNX20-201ENST00000300590 TMCO3Q6UWJ1 677 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 TMC6Q7Z403 805 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 BRF1Q92994 677 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 FEZ2Q9UHY8 353 aaPredicted RBP12.88□□□□□ -0.35
SNX20-201ENST00000300590 NEURL4Q96JN8 1562 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 PTPN21Q16825 1174 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 TEX35Q5T0J7 233 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
SNX20-201ENST00000300590 PA2G4Q9UQ80 394 aaKnown RBP12.88□□□□□ -0.35
SNX20-201ENST00000300590 URI1O94763 535 aaPredicted RBP12.88□□□□□ -0.35
SNX20-201ENST00000300590 GUCY1B3Q02153 619 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 ISM2Q6H9L7 571 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 MNS1Q8NEH6 495 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 SSH3Q8TE77 659 aa12.88□□□□□ -0.35
SNX20-201ENST00000300590 NUDT16Q96DE0 195 aaKnown RBP12.88□□□□□ -0.35
SNX20-201ENST00000300590 BIN1O00499 593 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
SNX20-201ENST00000300590 IL17RAQ96F46 866 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 ELP1O95163 1332 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 TTC21AQ8NDW8 1320 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 POGZQ7Z3K3 1410 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 CLASRPQ8N2M8 674 aaKnown RBP12.87□□□□□ -0.35
SNX20-201ENST00000300590 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.87□□□□□ -0.35
SNX20-201ENST00000300590 RSPH14Q9UHP6 348 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 DLG5Q8TDM6 1919 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 TRIM66O15016 1216 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 NEMFO60524 1076 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 GLRX3O76003 335 aaKnown RBP12.87□□□□□ -0.35
SNX20-201ENST00000300590 ZRSR1Q15695 479 aaKnown RBP12.87□□□□□ -0.35
SNX20-201ENST00000300590 CHMP4CQ96CF2 233 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 MRFAP1L1Q96HT8 127 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 SIL1Q9H173 461 aa12.87□□□□□ -0.35
SNX20-201ENST00000300590 TULP2O00295 520 aa12.86□□□□□ -0.35
SNX20-201ENST00000300590 KINO60870 393 aaKnown RBP12.86□□□□□ -0.35
SNX20-201ENST00000300590 STX1AQ16623 288 aa12.86□□□□□ -0.35
SNX20-201ENST00000300590 E4F1Q66K89 784 aaPredicted RBP12.86□□□□□ -0.35
SNX20-201ENST00000300590 NECTIN1Q15223 517 aa12.86□□□□□ -0.35
SNX20-201ENST00000300590 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
SNX20-201ENST00000300590 CCDC73Q6ZRK6 1079 aa12.86□□□□□ -0.35
SNX20-201ENST00000300590 SMARCE1Q969G3 411 aa12.86□□□□□ -0.35
SNX20-201ENST00000300590 CCDC8Q9H0W5 538 aaPredicted RBP12.86□□□□□ -0.35
SNX20-201ENST00000300590 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNX20-201ENST00000300590 PTPRMP28827 1452 aa12.85□□□□□ -0.35
SNX20-201ENST00000300590 NMIQ13287 307 aaPredicted RBP12.85□□□□□ -0.35
SNX20-201ENST00000300590 HDGFL1Q5TGJ6 251 aa12.85□□□□□ -0.35
SNX20-201ENST00000300590 PPP1R13BQ96KQ4 1090 aa12.85□□□□□ -0.35
SNX20-201ENST00000300590 FAM53CQ9NYF3 392 aa12.85□□□□□ -0.35
SNX20-201ENST00000300590 IFNKQ9P0W0 207 aa12.85□□□□□ -0.35
SNX20-201ENST00000300590 SLC27A2O14975 620 aa12.85□□□□□ -0.35
SNX20-201ENST00000300590 H2AFXP16104 143 aaPredicted RBP12.85□□□□□ -0.35
SNX20-201ENST00000300590 ME1P48163 572 aa12.85□□□□□ -0.35
SNX20-201ENST00000300590 CARD6Q9BX69 1037 aa12.85□□□□□ -0.35
SNX20-201ENST00000300590 BOLA2Q9H3K6 86 aa12.85□□□□□ -0.35
SNX20-201ENST00000300590 SFPQP23246 707 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNX20-201ENST00000300590 ARGLU1Q9NWB6 273 aaPredicted RBP12.85□□□□□ -0.35
SNX20-201ENST00000300590 AOX1Q06278 1338 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 WASLO00401 505 aaPredicted RBP12.84□□□□□ -0.35
SNX20-201ENST00000300590 PSMA5P28066 241 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 GOLGA8FQ08AF8 430 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 GOLGA8DPQ0D2H9 430 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 AACSQ86V21 672 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 CCDC191Q8NCU4 936 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms