RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ARHGEF1Q92888 912 aaKnown RBP30.74■■■□□ 2.51
GTF2A1-201ENST00000298173 GPTP24298 496 aa30.72■■■□□ 2.51
GTF2A1-201ENST00000298173 BICC1Q9H694 974 aaKnown RBP30.72■■■□□ 2.51
GTF2A1-201ENST00000298173 PDZRN3Q9UPQ7 1066 aa30.72■■■□□ 2.51
GTF2A1-201ENST00000298173 SCN7AQ01118 1682 aa30.71■■■□□ 2.51
GTF2A1-201ENST00000298173 PCCAP05165 728 aaPredicted RBP30.71■■■□□ 2.51
GTF2A1-201ENST00000298173 ADRA2BP18089 450 aa30.71■■■□□ 2.51
GTF2A1-201ENST00000298173 EPHA10Q5JZY3 1008 aa30.71■■■□□ 2.51
GTF2A1-201ENST00000298173 TRAPPC3LQ5T215 181 aa30.71■■■□□ 2.51
GTF2A1-201ENST00000298173 BCL2L12Q9HB09 334 aa30.71■■■□□ 2.51
GTF2A1-201ENST00000298173 UBN2Q6ZU65 1347 aa30.71■■■□□ 2.51
GTF2A1-201ENST00000298173 ZBTB38Q8NAP3 1195 aaPredicted RBP30.71■■■□□ 2.51
GTF2A1-201ENST00000298173 ZNF652Q9Y2D9 606 aa30.71■■■□□ 2.51
GTF2A1-201ENST00000298173 C4AP0C0L4 1744 aa30.7■■■□□ 2.51
GTF2A1-201ENST00000298173 RABL6Q3YEC7 729 aaPredicted RBP30.7■■■□□ 2.5
GTF2A1-201ENST00000298173 SRGAP3O43295 1099 aa30.69■■■□□ 2.5
GTF2A1-201ENST00000298173 SKAP1Q86WV1 359 aa30.69■■■□□ 2.5
GTF2A1-201ENST00000298173 NUCB1Q02818 461 aa30.68■■■□□ 2.5
GTF2A1-201ENST00000298173 FOXO4P98177 505 aa30.68■■■□□ 2.5
GTF2A1-201ENST00000298173 USPL1Q5W0Q7 1092 aa30.68■■■□□ 2.5
GTF2A1-201ENST00000298173 CAMKK2Q96RR4 588 aa30.68■■■□□ 2.5
GTF2A1-201ENST00000298173 SSFA2P28290 1259 aa30.67■■■□□ 2.5
GTF2A1-201ENST00000298173 PARP10Q53GL7 1025 aa30.67■■■□□ 2.5
GTF2A1-201ENST00000298173 AKT1S1Q96B36 256 aa30.67■■■□□ 2.5
GTF2A1-201ENST00000298173 SRP68Q9UHB9 627 aaKnown RBP30.67■■■□□ 2.5
GTF2A1-201ENST00000298173 CDHR2Q9BYE9 1310 aa30.66■■■□□ 2.5
GTF2A1-201ENST00000298173 ZPR1O75312 459 aa30.66■■■□□ 2.5
GTF2A1-201ENST00000298173 FAM89AQ96GI7 184 aa30.66■■■□□ 2.5
GTF2A1-201ENST00000298173 PLA2G12BQ9BX93 195 aa30.66■■■□□ 2.5
GTF2A1-201ENST00000298173 USP42Q9H9J4 1324 aaKnown RBP30.65■■■□□ 2.5
GTF2A1-201ENST00000298173 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.65■■■□□ 2.5
GTF2A1-201ENST00000298173 RTL5Q5HYW3 569 aaPredicted RBP30.65■■■□□ 2.5
GTF2A1-201ENST00000298173 SUSD4Q5VX71 490 aa30.65■■■□□ 2.5
GTF2A1-201ENST00000298173 NIP7Q9Y221 180 aaKnown RBP eCLIP30.65■■■□□ 2.59e-7■□□□□ 8.5
GTF2A1-201ENST00000298173 RFC4P35249 363 aa30.65■■■□□ 2.5
GTF2A1-201ENST00000298173 PHF14O94880 888 aa30.64■■■□□ 2.5
GTF2A1-201ENST00000298173 TRMT112Q9UI30 125 aaKnown RBP30.63■■■□□ 2.49
GTF2A1-201ENST00000298173 ANKRD45Q5TZF3 282 aa30.62■■■□□ 2.49
GTF2A1-201ENST00000298173 CHD1LQ86WJ1 897 aa30.62■■■□□ 2.49
GTF2A1-201ENST00000298173 SYNE4Q8N205 404 aa30.62■■■□□ 2.49
GTF2A1-201ENST00000298173 NOP58Q9Y2X3 529 aaKnown RBP30.62■■■□□ 2.49
GTF2A1-201ENST00000298173 EN1Q05925 392 aaPredicted RBP30.62■■■□□ 2.49
GTF2A1-201ENST00000298173 ZNF827Q17R98 1081 aa30.62■■■□□ 2.49
GTF2A1-201ENST00000298173 EZH2Q15910 746 aaKnown RBP30.61■■■□□ 2.49
GTF2A1-201ENST00000298173 TBC1D9BQ66K14 1250 aa30.61■■■□□ 2.49
GTF2A1-201ENST00000298173 UTP14AQ9BVJ6 771 aaKnown RBP30.61■■■□□ 2.49
GTF2A1-201ENST00000298173 LMBR1LQ6UX01 489 aa30.6■■■□□ 2.49
GTF2A1-201ENST00000298173 PELP1Q8IZL8 1130 aaKnown RBP30.6■■■□□ 2.49
GTF2A1-201ENST00000298173 EXOC6BQ9Y2D4 811 aa30.6■■■□□ 2.49
GTF2A1-201ENST00000298173 NTSR2O95665 410 aa30.59■■■□□ 2.49
GTF2A1-201ENST00000298173 RFX5P48382 616 aaPredicted RBP30.58■■■□□ 2.49
GTF2A1-201ENST00000298173 CSF1RP07333 972 aa30.58■■■□□ 2.49
GTF2A1-201ENST00000298173 PDE4AP27815 886 aa30.58■■■□□ 2.49
GTF2A1-201ENST00000298173 SURF6O75683 361 aaKnown RBP30.57■■■□□ 2.48
GTF2A1-201ENST00000298173 LNPKQ9C0E8 428 aa30.57■■■□□ 2.48
GTF2A1-201ENST00000298173 TUBGCP6Q96RT7 1819 aa30.57■■■□□ 2.48
GTF2A1-201ENST00000298173 SH3TC1Q8TE82 1336 aa30.57■■■□□ 2.48
GTF2A1-201ENST00000298173 IRS4O14654 1257 aaPredicted RBP30.56■■■□□ 2.48
GTF2A1-201ENST00000298173 MYH3P11055 1940 aa30.56■■■□□ 2.48
GTF2A1-201ENST00000298173 COL24A1Q17RW2 1714 aa30.56■■■□□ 2.48
GTF2A1-201ENST00000298173 RAB11FIP3O75154 756 aa30.55■■■□□ 2.48
GTF2A1-201ENST00000298173 SF3B2Q13435 895 aaKnown RBP30.55■■■□□ 2.48
GTF2A1-201ENST00000298173 COPRSQ9NQ92 184 aa30.55■■■□□ 2.48
GTF2A1-201ENST00000298173 TFCP2L1Q9NZI6 479 aa30.55■■■□□ 2.48
GTF2A1-201ENST00000298173 BAG6P46379 1132 aa30.55■■■□□ 2.48
GTF2A1-201ENST00000298173 RGS3P49796 1198 aa30.55■■■□□ 2.48
GTF2A1-201ENST00000298173 SETDB2Q96T68 719 aa30.55■■■□□ 2.48
GTF2A1-201ENST00000298173 GYS1P13807 737 aa30.54■■■□□ 2.48
GTF2A1-201ENST00000298173 CCDC125Q86Z20 511 aa30.54■■■□□ 2.48
GTF2A1-201ENST00000298173 PA2G4Q9UQ80 394 aaKnown RBP30.54■■■□□ 2.48
GTF2A1-201ENST00000298173 PDE8AO60658 829 aa30.53■■■□□ 2.48
GTF2A1-201ENST00000298173 PTPN12Q05209 780 aaKnown RBP30.53■■■□□ 2.48
GTF2A1-201ENST00000298173 HSP90AB4PQ58FF6 505 aa30.53■■■□□ 2.48
GTF2A1-201ENST00000298173 FAM177BA6PVY3 158 aa30.52■■■□□ 2.48
GTF2A1-201ENST00000298173 BICDL1Q6ZP65 573 aa30.52■■■□□ 2.48
GTF2A1-201ENST00000298173 DDX60Q8IY21 1712 aaKnown RBP30.52■■■□□ 2.48
GTF2A1-201ENST00000298173 FLAD1Q8NFF5 587 aa30.52■■■□□ 2.48
GTF2A1-201ENST00000298173 TTLL11Q8NHH1 800 aa30.52■■■□□ 2.48
GTF2A1-201ENST00000298173 LRRCC1Q9C099 1032 aa30.52■■■□□ 2.48
GTF2A1-201ENST00000298173 DEFB132Q7Z7B7 95 aa30.51■■■□□ 2.47
GTF2A1-201ENST00000298173 COL23A1Q86Y22 540 aaPredicted RBP30.51■■■□□ 2.47
GTF2A1-201ENST00000298173 APBB1O00213 710 aa30.5■■■□□ 2.47
GTF2A1-201ENST00000298173 SMARCA5O60264 1052 aaPredicted RBP30.5■■■□□ 2.47
GTF2A1-201ENST00000298173 LAMB2P55268 1798 aa30.5■■■□□ 2.47
GTF2A1-201ENST00000298173 CTSWP56202 376 aa30.49■■■□□ 2.47
GTF2A1-201ENST00000298173 NFIXQ14938 502 aa30.49■■■□□ 2.47
GTF2A1-201ENST00000298173 SLC10A5Q5PT55 438 aa30.49■■■□□ 2.47
GTF2A1-201ENST00000298173 NUTM1Q86Y26 1132 aa30.49■■■□□ 2.47
GTF2A1-201ENST00000298173 KLHDC4Q8TBB5 520 aa30.49■■■□□ 2.47
GTF2A1-201ENST00000298173 RHPN1Q8TCX5 695 aa30.49■■■□□ 2.47
GTF2A1-201ENST00000298173 NYXQ9GZU5 481 aa30.49■■■□□ 2.47
GTF2A1-201ENST00000298173 HCLS1P14317 486 aaPredicted RBP30.48■■■□□ 2.47
GTF2A1-201ENST00000298173 HSP90B1P14625 803 aaKnown RBP30.48■■■□□ 2.47
GTF2A1-201ENST00000298173 TM4SF1P30408 202 aa30.48■■■□□ 2.47
GTF2A1-201ENST00000298173 KIF1BPQ96EK5 621 aa30.48■■■□□ 2.47
GTF2A1-201ENST00000298173 PNPLA7Q6ZV29 1317 aa30.47■■■□□ 2.47
GTF2A1-201ENST00000298173 SLC15A2Q16348 729 aa30.47■■■□□ 2.47
GTF2A1-201ENST00000298173 C16orf71Q8IYS4 520 aaPredicted RBP30.47■■■□□ 2.47
GTF2A1-201ENST00000298173 ANO8Q9HCE9 1232 aaPredicted RBP30.47■■■□□ 2.47
GTF2A1-201ENST00000298173 CHMP3Q9Y3E7 222 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms