RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 CHMP4BQ9H444 224 aaKnown RBP8.17□□□□□ -1.1
TMC1-201ENST00000297784 ATP5J2-PTCD1G3V325 749 aa8.17□□□□□ -1.1
TMC1-201ENST00000297784 OFD1O75665 1012 aa8.17□□□□□ -1.1
TMC1-201ENST00000297784 ALDH1L1O75891 902 aa8.17□□□□□ -1.1
TMC1-201ENST00000297784 GNAI2P04899 355 aa8.17□□□□□ -1.1
TMC1-201ENST00000297784 EIF5P55010 431 aaKnown RBP8.17□□□□□ -1.1
TMC1-201ENST00000297784 GCKRQ14397 625 aa8.17□□□□□ -1.1
TMC1-201ENST00000297784 HLFQ16534 295 aa8.17□□□□□ -1.1
TMC1-201ENST00000297784 PPP1R9BQ96SB3 815 aa8.17□□□□□ -1.1
TMC1-201ENST00000297784 DDIT3P35638 169 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 CASP7P55210 303 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 RPAP2Q8IXW5 612 aaPredicted RBP8.16□□□□□ -1.1
TMC1-201ENST00000297784 ZBTB3Q9H5J0 574 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 DCTPP1Q9H773 170 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 PDZRN3Q9UPQ7 1066 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 GNAI3P08754 354 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 KIAA1211Q6ZU35 1233 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 SMIM5Q71RC9 77 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 BCL11BQ9C0K0 894 aaPredicted RBP8.16□□□□□ -1.1
TMC1-201ENST00000297784 GZF1Q9H116 711 aaPredicted RBP8.16□□□□□ -1.1
TMC1-201ENST00000297784 LRRC4BQ9NT99 713 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 IL6STP40189 918 aaPredicted RBP8.16□□□□□ -1.1
TMC1-201ENST00000297784 ATP8B2P98198 1209 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 NUCB1Q02818 461 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 CCDC173Q0VFZ6 552 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 JARID2Q92833 1246 aaPredicted RBP8.16□□□□□ -1.1
TMC1-201ENST00000297784 SMARCC1Q92922 1105 aaPredicted RBP8.16□□□□□ -1.1
TMC1-201ENST00000297784 BCORQ6W2J9 1755 aa8.16□□□□□ -1.1
TMC1-201ENST00000297784 GRM8O00222 908 aa8.15□□□□□ -1.1
TMC1-201ENST00000297784 UBTFL1P0CB47 393 aaPredicted RBP8.15□□□□□ -1.1
TMC1-201ENST00000297784 SKOR2Q2VWA4 1001 aaPredicted RBP8.15□□□□□ -1.1
TMC1-201ENST00000297784 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.15□□□□□ -1.1
TMC1-201ENST00000297784 CIZ1Q9ULV3 898 aaPredicted RBP8.15□□□□□ -1.1
TMC1-201ENST00000297784 EPHA10Q5JZY3 1008 aa8.15□□□□□ -1.11
TMC1-201ENST00000297784 FAM196AQ6ZSG2 479 aa8.15□□□□□ -1.11
TMC1-201ENST00000297784 PROM2Q8N271 834 aa8.15□□□□□ -1.11
TMC1-201ENST00000297784 SUCLG2Q96I99 432 aa8.15□□□□□ -1.11
TMC1-201ENST00000297784 CCDC87Q9NVE4 849 aa8.15□□□□□ -1.11
TMC1-201ENST00000297784 C4BP0C0L5 1744 aa8.15□□□□□ -1.11
TMC1-201ENST00000297784 MAP3K15Q6ZN16 1313 aa8.15□□□□□ -1.11
TMC1-201ENST00000297784 TRIM37O94972 964 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 RXRBP28702 533 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 POLA2Q14181 598 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 MTERF4Q7Z6M4 381 aaKnown RBP8.14□□□□□ -1.11
TMC1-201ENST00000297784 ZSCAN30Q86W11 494 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 SMAP1Q8IYB5 467 aaPredicted RBP8.14□□□□□ -1.11
TMC1-201ENST00000297784 ISCA1Q9BUE6 129 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 ZNF330Q9Y3S2 320 aaPredicted RBP8.14□□□□□ -1.11
TMC1-201ENST00000297784 TCIRG1Q13488 830 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 HS1BP3Q53T59 392 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 PPP1R42Q7Z4L9 355 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 SSH3Q8TE77 659 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 ARXQ96QS3 562 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 C4AP0C0L4 1744 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 TNS1Q9HBL0 1735 aaKnown RBP8.14□□□□□ -1.11
TMC1-201ENST00000297784 H7C1W4 665 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 MTX1Q13505 466 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 GIGYF2Q6Y7W6 1299 aaKnown RBP8.14□□□□□ -1.11
TMC1-201ENST00000297784 GCC1Q96CN9 775 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 BICC1Q9H694 974 aaKnown RBP8.14□□□□□ -1.11
TMC1-201ENST00000297784 C9orf78Q9NZ63 289 aaPredicted RBP8.14□□□□□ -1.11
TMC1-201ENST00000297784 UBR3Q6ZT12 1888 aa8.14□□□□□ -1.11
TMC1-201ENST00000297784 SRCAPQ6ZRS2 3230 aa8.13□□□□□ -1.11
TMC1-201ENST00000297784 NEXNQ0ZGT2 675 aa8.13□□□□□ -1.11
TMC1-201ENST00000297784 CAMTA2O94983 1202 aa8.13□□□□□ -1.11
TMC1-201ENST00000297784 CHD1LQ86WJ1 897 aa8.13□□□□□ -1.11
TMC1-201ENST00000297784 SYNE4Q8N205 404 aa8.13□□□□□ -1.11
TMC1-201ENST00000297784 SNX21Q969T3 373 aa8.13□□□□□ -1.11
TMC1-201ENST00000297784 CASZ1Q86V15 1759 aa8.13□□□□□ -1.11
TMC1-201ENST00000297784 UBN2Q6ZU65 1347 aa8.13□□□□□ -1.11
TMC1-201ENST00000297784 CNTNAP4Q9C0A0 1308 aa8.13□□□□□ -1.11
TMC1-201ENST00000297784 NPM3O75607 178 aaKnown RBP8.12□□□□□ -1.11
TMC1-201ENST00000297784 FOXO4P98177 505 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 TRIM28Q13263 835 aaKnown RBP8.12□□□□□ -1.11
TMC1-201ENST00000297784 UBE3BQ7Z3V4 1068 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 DZIP3Q86Y13 1208 aaKnown RBP8.12□□□□□ -1.11
TMC1-201ENST00000297784 C16orf71Q8IYS4 520 aaPredicted RBP8.12□□□□□ -1.11
TMC1-201ENST00000297784 CCNL1Q9UK58 526 aaPredicted RBP8.12□□□□□ -1.11
TMC1-201ENST00000297784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.12□□□□□ -1.11
TMC1-201ENST00000297784 COL15A1P39059 1388 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 A0A087WZG4 1122 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 ERVV-1B6SEH8 477 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 RBM10P98175 930 aaKnown RBP8.12□□□□□ -1.11
TMC1-201ENST00000297784 ANKRD45Q5TZF3 282 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 GAS2L3Q86XJ1 694 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 CCDC191Q8NCU4 936 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 C22orf23Q9BZE7 217 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 LNPKQ9C0E8 428 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 SCN7AQ01118 1682 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 TUBGCP6Q96RT7 1819 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 SRGAP3O43295 1099 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 SMARCA5O60264 1052 aaPredicted RBP8.12□□□□□ -1.11
TMC1-201ENST00000297784 RABL6Q3YEC7 729 aaPredicted RBP8.12□□□□□ -1.11
TMC1-201ENST00000297784 ZNF34Q8IZ26 560 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 EXOC6BQ9Y2D4 811 aa8.12□□□□□ -1.11
TMC1-201ENST00000297784 MYH3P11055 1940 aa8.11□□□□□ -1.11
TMC1-201ENST00000297784 DDX60Q8IY21 1712 aaKnown RBP8.11□□□□□ -1.11
TMC1-201ENST00000297784 RC3H1Q5TC82 1133 aaKnown RBP8.11□□□□□ -1.11
TMC1-201ENST00000297784 KIF6Q6ZMV9 814 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms