RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 ADCY9O60503 1353 aa15.42■□□□□ 0.06
CDK5-201ENST00000297518 NPR1P16066 1061 aa15.42■□□□□ 0.06
CDK5-201ENST00000297518 EXOSC9Q06265 439 aaKnown RBP15.42■□□□□ 0.06
CDK5-201ENST00000297518 UTP14AQ9BVJ6 771 aaKnown RBP15.42■□□□□ 0.06
CDK5-201ENST00000297518 SLX4Q8IY92 1834 aa15.42■□□□□ 0.06
CDK5-201ENST00000297518 TCERG1O14776 1098 aaKnown RBP15.41■□□□□ 0.06
CDK5-201ENST00000297518 PRPF40BQ6NWY9 871 aaKnown RBP15.41■□□□□ 0.06
CDK5-201ENST00000297518 RIC3Q7Z5B4 369 aa15.41■□□□□ 0.06
CDK5-201ENST00000297518 DDX58O95786 925 aaKnown RBP15.4■□□□□ 0.06
CDK5-201ENST00000297518 CRY2Q49AN0 593 aa15.4■□□□□ 0.06
CDK5-201ENST00000297518 MIER1Q8N108 512 aa15.4■□□□□ 0.06
CDK5-201ENST00000297518 ISCA1Q9BUE6 129 aa15.4■□□□□ 0.06
CDK5-201ENST00000297518 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
CDK5-201ENST00000297518 CACNA1FO60840 1977 aa15.4■□□□□ 0.06
CDK5-201ENST00000297518 ATP5J2-PTCD1G3V325 749 aa15.39■□□□□ 0.05
CDK5-201ENST00000297518 C21orf2O43822 256 aa15.39■□□□□ 0.05
CDK5-201ENST00000297518 VAMP4O75379 141 aa15.39■□□□□ 0.05
CDK5-201ENST00000297518 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
CDK5-201ENST00000297518 SBF1O95248 1867 aa15.39■□□□□ 0.05
CDK5-201ENST00000297518 FER1L6Q2WGJ9 1857 aa15.38■□□□□ 0.05
CDK5-201ENST00000297518 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
CDK5-201ENST00000297518 ALDH1B1P30837 517 aa15.38■□□□□ 0.05
CDK5-201ENST00000297518 RASSF7Q02833 373 aa15.38■□□□□ 0.05
CDK5-201ENST00000297518 TRIM28Q13263 835 aaKnown RBP15.38■□□□□ 0.05
CDK5-201ENST00000297518 SLC10A5Q5PT55 438 aa15.38■□□□□ 0.05
CDK5-201ENST00000297518 RPGRQ92834 1020 aaKnown RBP15.38■□□□□ 0.05
CDK5-201ENST00000297518 LAMB2P55268 1798 aa15.38■□□□□ 0.05
CDK5-201ENST00000297518 SH3TC1Q8TE82 1336 aa15.38■□□□□ 0.05
CDK5-201ENST00000297518 E9PSI1 815 aa15.37■□□□□ 0.05
CDK5-201ENST00000297518 SOGA3Q5TF21 947 aa15.37■□□□□ 0.05
CDK5-201ENST00000297518 C9orf131Q5VYM1 1079 aa15.37■□□□□ 0.05
CDK5-201ENST00000297518 NLRP3Q96P20 1036 aa15.37■□□□□ 0.05
CDK5-201ENST00000297518 MYD88Q99836 296 aa15.37■□□□□ 0.05
CDK5-201ENST00000297518 DDX60Q8IY21 1712 aaKnown RBP15.37■□□□□ 0.05
CDK5-201ENST00000297518 NFKBIEO00221 500 aa15.36■□□□□ 0.05
CDK5-201ENST00000297518 HCLS1P14317 486 aaPredicted RBP15.36■□□□□ 0.05
CDK5-201ENST00000297518 HOXA10P31260 410 aaPredicted RBP15.36■□□□□ 0.05
CDK5-201ENST00000297518 KSR2Q6VAB6 950 aa15.36■□□□□ 0.05
CDK5-201ENST00000297518 C3orf67Q6ZVT6 689 aa15.36■□□□□ 0.05
CDK5-201ENST00000297518 G2E3Q7L622 706 aa15.36■□□□□ 0.05
CDK5-201ENST00000297518 SYNE4Q8N205 404 aa15.36■□□□□ 0.05
CDK5-201ENST00000297518 ZNF428Q96B54 188 aa15.36■□□□□ 0.05
CDK5-201ENST00000297518 METTL22Q9BUU2 404 aaPredicted RBP15.36■□□□□ 0.05
CDK5-201ENST00000297518 RNF181Q9P0P0 153 aa15.36■□□□□ 0.05
CDK5-201ENST00000297518 MAP3K2Q9Y2U5 619 aa15.36■□□□□ 0.05
CDK5-201ENST00000297518 PI4KAP2A4QPH2 592 aa15.35■□□□□ 0.05
CDK5-201ENST00000297518 LMNB1P20700 586 aa15.35■□□□□ 0.05
CDK5-201ENST00000297518 FLIIQ13045 1269 aa15.35■□□□□ 0.05
CDK5-201ENST00000297518 PI4KAP1Q8N8J0 262 aa15.35■□□□□ 0.05
CDK5-201ENST00000297518 C7orf43Q8WVR3 580 aa15.35■□□□□ 0.05
CDK5-201ENST00000297518 RBM17Q96I25 401 aaKnown RBP15.35■□□□□ 0.05
CDK5-201ENST00000297518 CCDC88AQ3V6T2 1871 aa15.35■□□□□ 0.05
CDK5-201ENST00000297518 SLFN5Q08AF3 891 aa15.34■□□□□ 0.05
CDK5-201ENST00000297518 CCDC93Q567U6 631 aa15.34■□□□□ 0.05
CDK5-201ENST00000297518 CCDC191Q8NCU4 936 aa15.34■□□□□ 0.05
CDK5-201ENST00000297518 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
CDK5-201ENST00000297518 CRAMP1Q96RY5 1269 aa15.34■□□□□ 0.05
CDK5-201ENST00000297518 LTBP3Q9NS15 1303 aa15.34■□□□□ 0.05
CDK5-201ENST00000297518 TIAM2Q8IVF5 1701 aa15.34■□□□□ 0.05
CDK5-201ENST00000297518 PRELPP51888 382 aa15.33■□□□□ 0.04
CDK5-201ENST00000297518 NEXNQ0ZGT2 675 aa15.33■□□□□ 0.04
CDK5-201ENST00000297518 FKBP5Q13451 457 aaPredicted RBP15.33■□□□□ 0.04
CDK5-201ENST00000297518 TAOK3Q9H2K8 898 aa15.33■□□□□ 0.04
CDK5-201ENST00000297518 CWC25Q9NXE8 425 aaPredicted RBP15.33■□□□□ 0.04
CDK5-201ENST00000297518 RTL5Q5HYW3 569 aaPredicted RBP15.32■□□□□ 0.04
CDK5-201ENST00000297518 ZBTB38Q8NAP3 1195 aaPredicted RBP15.32■□□□□ 0.04
CDK5-201ENST00000297518 ZNF526Q8TF50 670 aaPredicted RBP15.32■□□□□ 0.04
CDK5-201ENST00000297518 DICER1Q9UPY3 1922 aaKnown RBP15.32■□□□□ 0.04
CDK5-201ENST00000297518 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
CDK5-201ENST00000297518 PPEF1O14829 653 aaPredicted RBP15.31■□□□□ 0.04
CDK5-201ENST00000297518 PCCAP05165 728 aaPredicted RBP15.31■□□□□ 0.04
CDK5-201ENST00000297518 IGKV5-2P06315 115 aa15.31■□□□□ 0.04
CDK5-201ENST00000297518 OLFM4Q6UX06 510 aa15.31■□□□□ 0.04
CDK5-201ENST00000297518 CDCA7LQ96GN5 454 aa15.31■□□□□ 0.04
CDK5-201ENST00000297518 GPBP1L1Q9HC44 474 aaPredicted RBP15.31■□□□□ 0.04
CDK5-201ENST00000297518 ABCC4O15439 1325 aa15.31■□□□□ 0.04
CDK5-201ENST00000297518 ZC3H4Q9UPT8 1303 aaKnown RBP15.31■□□□□ 0.04
CDK5-201ENST00000297518 HSP90B1P14625 803 aaKnown RBP15.3■□□□□ 0.04
CDK5-201ENST00000297518 FKBP4Q02790 459 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDK5-201ENST00000297518 CC2D2BQ6DHV5 1058 aa15.3■□□□□ 0.04
CDK5-201ENST00000297518 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
CDK5-201ENST00000297518 RTKN2Q8IZC4 609 aa15.3■□□□□ 0.04
CDK5-201ENST00000297518 SNED1Q8TER0 1413 aa15.3■□□□□ 0.04
CDK5-201ENST00000297518 DNAAF4Q8WXU2 420 aa15.3■□□□□ 0.04
CDK5-201ENST00000297518 SF3B3Q15393 1217 aaKnown RBP15.29■□□□□ 0.04
CDK5-201ENST00000297518 CWF19L2Q2TBE0 894 aaKnown RBP15.29■□□□□ 0.04
CDK5-201ENST00000297518 TRMT2AQ8IZ69 625 aaKnown RBP15.29■□□□□ 0.04
CDK5-201ENST00000297518 NEURL1BA8MQ27 555 aa15.28■□□□□ 0.04
CDK5-201ENST00000297518 TAF1P21675 1872 aa15.28■□□□□ 0.04
CDK5-201ENST00000297518 CDHR2Q9BYE9 1310 aa15.27■□□□□ 0.04
CDK5-201ENST00000297518 BBOX1O75936 387 aa15.27■□□□□ 0.04
CDK5-201ENST00000297518 GRAPQ13588 217 aa15.27■□□□□ 0.04
CDK5-201ENST00000297518 GRIPAP1Q4V328 841 aa15.27■□□□□ 0.04
CDK5-201ENST00000297518 LINS1Q8NG48 757 aa15.27■□□□□ 0.04
CDK5-201ENST00000297518 GRAPLQ8TC17 118 aaPredicted RBP15.27■□□□□ 0.04
CDK5-201ENST00000297518 JARID2Q92833 1246 aaPredicted RBP15.27■□□□□ 0.04
CDK5-201ENST00000297518 PSMD1Q99460 953 aa15.27■□□□□ 0.04
CDK5-201ENST00000297518 TMX4Q9H1E5 349 aaPredicted RBP15.27■□□□□ 0.04
CDK5-201ENST00000297518 ATP6V0A2Q9Y487 856 aa15.27■□□□□ 0.04
CDK5-201ENST00000297518 KDM2BQ8NHM5 1336 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 374.5 ms