RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 AXIN2Q9Y2T1 843 aa12.01□□□□□ -0.49
TNFRSF11B-201ENST00000297350 NEURL1BA8MQ27 555 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 BICC1Q9H694 974 aaKnown RBP12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 COPRSQ9NQ92 184 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 STX6O43752 255 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 GCKRQ14397 625 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 NECTIN1Q15223 517 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 CWF19L2Q2TBE0 894 aaKnown RBP12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 UVSSAQ2YD98 709 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 LMOD2Q6P5Q4 547 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 RUFY3Q7L099 469 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 MAP4K1Q92918 833 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 KAZALD1Q96I82 304 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 RBSNQ9H1K0 784 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 TSPY26PQ9H489 355 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 PDRG1Q9NUG6 133 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 MEGF6O75095 1541 aa12□□□□□ -0.49
TNFRSF11B-201ENST00000297350 MED23Q9ULK4 1368 aa11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 MAP4K4O95819 1239 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 CASTP20810 708 aaKnown RBP11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 PDCP20941 246 aa11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 TSGA10IPQ3SY00 556 aa11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 FMNL2Q96PY5 1086 aa11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 AHDC1Q5TGY3 1603 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 COL22A1Q8NFW1 1626 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 SASH1O94885 1247 aa11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 IGKV5-2P06315 115 aa11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 MSNP26038 577 aaKnown RBP11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 UBE2HP62256 183 aa11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 KRT32Q14532 448 aa11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 TTC5Q8N0Z6 440 aa11.99□□□□□ -0.49
TNFRSF11B-201ENST00000297350 TERF1P54274 439 aa11.98□□□□□ -0.49
TNFRSF11B-201ENST00000297350 RABL6Q3YEC7 729 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF11B-201ENST00000297350 CCDC183Q5T5S1 534 aa11.98□□□□□ -0.49
TNFRSF11B-201ENST00000297350 JAKMIP1Q96N16 626 aaKnown RBP11.98□□□□□ -0.49
TNFRSF11B-201ENST00000297350 NLRP2Q9NX02 1062 aa11.98□□□□□ -0.49
TNFRSF11B-201ENST00000297350 CCDC39Q9UFE4 941 aa11.98□□□□□ -0.49
TNFRSF11B-201ENST00000297350 GLI3P10071 1580 aa11.98□□□□□ -0.49
TNFRSF11B-201ENST00000297350 SYCE3A1L190 88 aa11.98□□□□□ -0.49
TNFRSF11B-201ENST00000297350 F13A1P00488 732 aa11.98□□□□□ -0.49
TNFRSF11B-201ENST00000297350 NOL7Q9UMY1 257 aaKnown RBP11.98□□□□□ -0.49
TNFRSF11B-201ENST00000297350 UBR2Q8IWV8 1755 aa11.98□□□□□ -0.49
TNFRSF11B-201ENST00000297350 SPEF2Q9C093 1822 aa11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 ATP5JP18859 108 aa11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 SYT1P21579 422 aa11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 ANKRD13DQ6ZTN6 518 aa11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 NOL8Q76FK4 1167 aaKnown RBP11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 XAGE3Q8WTP9 111 aa11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 EAF2Q96CJ1 260 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 PA2G4Q9UQ80 394 aaKnown RBP11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 RBM8AQ9Y5S9 174 aaKnown RBP11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 CREB3L3Q68CJ9 461 aa11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 PRPF40BQ6NWY9 871 aaKnown RBP11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 USP48Q86UV5 1035 aa11.97□□□□□ -0.49
TNFRSF11B-201ENST00000297350 PAPPAQ13219 1627 aa11.96□□□□□ -0.49
TNFRSF11B-201ENST00000297350 KCNJ4P48050 445 aa11.96□□□□□ -0.49
TNFRSF11B-201ENST00000297350 PTH1RQ03431 593 aa11.96□□□□□ -0.49
TNFRSF11B-201ENST00000297350 LRP10Q7Z4F1 713 aa11.96□□□□□ -0.49
TNFRSF11B-201ENST00000297350 FSD1Q9BTV5 496 aa11.96□□□□□ -0.49
TNFRSF11B-201ENST00000297350 SLAIN2Q9P270 581 aa11.96□□□□□ -0.49
TNFRSF11B-201ENST00000297350 NUP188Q5SRE5 1749 aa11.96□□□□□ -0.5
TNFRSF11B-201ENST00000297350 ZNF500O60304 480 aaPredicted RBP11.96□□□□□ -0.5
TNFRSF11B-201ENST00000297350 TPM2P07951 284 aa11.96□□□□□ -0.5
TNFRSF11B-201ENST00000297350 NMIQ13287 307 aaPredicted RBP11.96□□□□□ -0.5
TNFRSF11B-201ENST00000297350 LTBP4Q8N2S1 1624 aa11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 USPL1Q5W0Q7 1092 aa11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 PLBD2Q8NHP8 589 aa11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 DDX17Q92841 729 aaKnown RBP11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 ZNF496Q96IT1 587 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 MYD88Q99836 296 aa11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 GPR108Q9NPR9 543 aa11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 SHANK3Q9BYB0 1731 aa11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 PRAMEF22A3QJZ6 481 aa11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 SLC27A2O14975 620 aa11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 ZC3H6P61129 1189 aaKnown RBP11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 AIMP1Q12904 312 aaKnown RBP11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 NFATC2IPQ8NCF5 419 aa11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 NAP1L5Q96NT1 182 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 ELP1O95163 1332 aa11.95□□□□□ -0.5
TNFRSF11B-201ENST00000297350 TCHHQ07283 1943 aa11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 CSB-PGBD3P0DP91 1061 aa11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 GJB2P29033 226 aa11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 FOXD4L5Q5VV16 416 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 BLOC1S2Q6QNY1 142 aa11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 FOXD4L4Q8WXT5 416 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 CHMP4CQ96CF2 233 aa11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 COL5A2P05997 1499 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 PLCH1Q4KWH8 1693 aa11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 ROBO1Q9Y6N7 1651 aa11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 OFD1O75665 1012 aa11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 RFX5P48382 616 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 NSFL1CQ9UNZ2 370 aaKnown RBP11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 MTMR6Q9Y217 621 aa11.94□□□□□ -0.5
TNFRSF11B-201ENST00000297350 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms