RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 COPS6Q7L5N1 327 aa17.57■□□□□ 0.4
GDF9-201ENST00000296875 ANP32BQ92688 251 aaKnown RBP17.57■□□□□ 0.4
GDF9-201ENST00000296875 ZNF496Q96IT1 587 aaPredicted RBP17.57■□□□□ 0.4
GDF9-201ENST00000296875 BICC1Q9H694 974 aaKnown RBP17.57■□□□□ 0.4
GDF9-201ENST00000296875 MYL6BP14649 208 aa17.56■□□□□ 0.4
GDF9-201ENST00000296875 SLC39A6Q13433 755 aa17.56■□□□□ 0.4
GDF9-201ENST00000296875 TICAM2Q86XR7 235 aa17.56■□□□□ 0.4
GDF9-201ENST00000296875 ZKSCAN1P17029 563 aaPredicted RBP17.56■□□□□ 0.4
GDF9-201ENST00000296875 MEX3CQ5U5Q3 659 aaKnown RBP17.56■□□□□ 0.4
GDF9-201ENST00000296875 BARGINQ6ZT62 677 aa17.56■□□□□ 0.4
GDF9-201ENST00000296875 FAM43AQ8N2R8 423 aa17.56■□□□□ 0.4
GDF9-201ENST00000296875 PLBD2Q8NHP8 589 aa17.56■□□□□ 0.4
GDF9-201ENST00000296875 GRPEL1Q9HAV7 217 aa17.56■□□□□ 0.4
GDF9-201ENST00000296875 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.56■□□□□ 0.4
GDF9-201ENST00000296875 TNS2Q63HR2 1409 aa17.55■□□□□ 0.4
GDF9-201ENST00000296875 MBD3O95983 291 aa17.55■□□□□ 0.4
GDF9-201ENST00000296875 MCTP1Q6DN14 999 aa17.55■□□□□ 0.4
GDF9-201ENST00000296875 MYD88Q99836 296 aa17.55■□□□□ 0.4
GDF9-201ENST00000296875 PRAMEF22A3QJZ6 481 aa17.54■□□□□ 0.4
GDF9-201ENST00000296875 IGKV5-2P06315 115 aa17.54■□□□□ 0.4
GDF9-201ENST00000296875 RNF20Q5VTR2 975 aa17.54■□□□□ 0.4
GDF9-201ENST00000296875 TM6SF1Q9BZW5 370 aa17.54■□□□□ 0.4
GDF9-201ENST00000296875 LSG1Q9H089 658 aaKnown RBP17.54■□□□□ 0.4
GDF9-201ENST00000296875 COPRSQ9NQ92 184 aa17.54■□□□□ 0.4
GDF9-201ENST00000296875 USP21Q9UK80 565 aa17.54■□□□□ 0.4
GDF9-201ENST00000296875 RFX7Q2KHR2 1363 aa17.54■□□□□ 0.4
GDF9-201ENST00000296875 WDR33Q9C0J8 1336 aaKnown RBP17.54■□□□□ 0.4
GDF9-201ENST00000296875 ITGB4P16144 1822 aa17.53■□□□□ 0.4
GDF9-201ENST00000296875 ZNF772Q68DY9 489 aaPredicted RBP17.53■□□□□ 0.4
GDF9-201ENST00000296875 CWC27Q6UX04 472 aaKnown RBP17.53■□□□□ 0.4
GDF9-201ENST00000296875 ZSCAN31Q96LW9 406 aaPredicted RBP17.53■□□□□ 0.4
GDF9-201ENST00000296875 CDCA7Q9BWT1 371 aaPredicted RBP17.53■□□□□ 0.4
GDF9-201ENST00000296875 GLI3P10071 1580 aa17.53■□□□□ 0.4
GDF9-201ENST00000296875 AFF2P51816 1311 aa17.53■□□□□ 0.4
GDF9-201ENST00000296875 DDX54Q8TDD1 881 aaKnown RBP17.53■□□□□ 0.4
GDF9-201ENST00000296875 ATRNO75882 1429 aa17.52■□□□□ 0.4
GDF9-201ENST00000296875 XRCC6P12956 609 aaKnown RBP eCLIP17.52■□□□□ 0.4
GDF9-201ENST00000296875 NCLP19338 710 aaKnown RBP17.52■□□□□ 0.4
GDF9-201ENST00000296875 PSMA5P28066 241 aa17.52■□□□□ 0.4
GDF9-201ENST00000296875 ZGPATQ8N5A5 531 aaKnown RBP17.52■□□□□ 0.4
GDF9-201ENST00000296875 PALD1Q9ULE6 856 aa17.52■□□□□ 0.4
GDF9-201ENST00000296875 LIMCH1Q9UPQ0 1083 aa17.52■□□□□ 0.4
GDF9-201ENST00000296875 ATP6V1DQ9Y5K8 247 aa17.52■□□□□ 0.4
GDF9-201ENST00000296875 THSD7AQ9UPZ6 1657 aa17.52■□□□□ 0.39
GDF9-201ENST00000296875 MAP4K4O95819 1239 aaPredicted RBP17.51■□□□□ 0.39
GDF9-201ENST00000296875 RABL6Q3YEC7 729 aaPredicted RBP17.51■□□□□ 0.39
GDF9-201ENST00000296875 SYAP1Q96A49 352 aaPredicted RBP17.51■□□□□ 0.39
GDF9-201ENST00000296875 SH2B1Q9NRF2 756 aaPredicted RBP17.51■□□□□ 0.39
GDF9-201ENST00000296875 SNX14Q9Y5W7 946 aa17.51■□□□□ 0.39
GDF9-201ENST00000296875 BRD1O95696 1058 aa17.51■□□□□ 0.39
GDF9-201ENST00000296875 SNRKQ9NRH2 765 aa17.51■□□□□ 0.39
GDF9-201ENST00000296875 PA2G4Q9UQ80 394 aaKnown RBP17.51■□□□□ 0.39
GDF9-201ENST00000296875 KAT6BQ8WYB5 2073 aa17.5■□□□□ 0.39
GDF9-201ENST00000296875 PAPPAQ13219 1627 aa17.5■□□□□ 0.39
GDF9-201ENST00000296875 SASH1O94885 1247 aa17.5■□□□□ 0.39
GDF9-201ENST00000296875 KCNJ4P48050 445 aa17.5■□□□□ 0.39
GDF9-201ENST00000296875 VPS53Q5VIR6 699 aa17.5■□□□□ 0.39
GDF9-201ENST00000296875 KAZALD1Q96I82 304 aa17.5■□□□□ 0.39
GDF9-201ENST00000296875 CCDC9Q9Y3X0 531 aaKnown RBP17.5■□□□□ 0.39
GDF9-201ENST00000296875 ARFGEF2Q9Y6D5 1785 aa17.49■□□□□ 0.39
GDF9-201ENST00000296875 EXOC5O00471 708 aa17.49■□□□□ 0.39
GDF9-201ENST00000296875 ZNF445P59923 1031 aa17.49■□□□□ 0.39
GDF9-201ENST00000296875 ANKRD1Q15327 319 aa17.49■□□□□ 0.39
GDF9-201ENST00000296875 LRP10Q7Z4F1 713 aa17.49■□□□□ 0.39
GDF9-201ENST00000296875 KCNB2Q92953 911 aa17.49■□□□□ 0.39
GDF9-201ENST00000296875 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
GDF9-201ENST00000296875 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
GDF9-201ENST00000296875 USP16Q9Y5T5 823 aa17.49■□□□□ 0.39
GDF9-201ENST00000296875 CYP46A1Q9Y6A2 500 aa17.49■□□□□ 0.39
GDF9-201ENST00000296875 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
GDF9-201ENST00000296875 UBR2Q8IWV8 1755 aa17.49■□□□□ 0.39
GDF9-201ENST00000296875 A0A087WZG4 1122 aa17.48■□□□□ 0.39
GDF9-201ENST00000296875 CSPP1Q1MSJ5 1256 aa17.48■□□□□ 0.39
GDF9-201ENST00000296875 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
GDF9-201ENST00000296875 FSD1Q9BTV5 496 aa17.48■□□□□ 0.39
GDF9-201ENST00000296875 LMBRD1Q9NUN5 540 aa17.48■□□□□ 0.39
GDF9-201ENST00000296875 CCDC171Q6TFL3 1326 aa17.48■□□□□ 0.39
GDF9-201ENST00000296875 PHF14O94880 888 aa17.48■□□□□ 0.39
GDF9-201ENST00000296875 FAM98CQ17RN3 349 aaKnown RBP17.48■□□□□ 0.39
GDF9-201ENST00000296875 EAF2Q96CJ1 260 aaPredicted RBP17.48■□□□□ 0.39
GDF9-201ENST00000296875 UPF3BQ9BZI7 483 aaKnown RBP17.48■□□□□ 0.39
GDF9-201ENST00000296875 ATP5JP18859 108 aa17.47■□□□□ 0.39
GDF9-201ENST00000296875 KRT32Q14532 448 aa17.47■□□□□ 0.39
GDF9-201ENST00000296875 DDB1Q16531 1140 aa17.47■□□□□ 0.39
GDF9-201ENST00000296875 CWC25Q9NXE8 425 aaPredicted RBP17.47■□□□□ 0.39
GDF9-201ENST00000296875 DOT1LQ8TEK3 1739 aa17.47■□□□□ 0.39
GDF9-201ENST00000296875 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
GDF9-201ENST00000296875 MARCH10Q8NA82 808 aaPredicted RBP17.46■□□□□ 0.39
GDF9-201ENST00000296875 CCDC191Q8NCU4 936 aa17.46■□□□□ 0.39
GDF9-201ENST00000296875 GJD4Q96KN9 370 aaPredicted RBP17.46■□□□□ 0.39
GDF9-201ENST00000296875 TTC14Q96N46 770 aa17.46■□□□□ 0.39
GDF9-201ENST00000296875 CASTP20810 708 aaKnown RBP17.45■□□□□ 0.38
GDF9-201ENST00000296875 TRIM44Q96DX7 344 aaPredicted RBP17.45■□□□□ 0.38
GDF9-201ENST00000296875 SIL1Q9H173 461 aa17.45■□□□□ 0.38
GDF9-201ENST00000296875 GPR108Q9NPR9 543 aa17.45■□□□□ 0.38
GDF9-201ENST00000296875 ATG3Q9NT62 314 aa17.45■□□□□ 0.38
GDF9-201ENST00000296875 PDRG1Q9NUG6 133 aa17.45■□□□□ 0.38
GDF9-201ENST00000296875 PRPF40AO75400 957 aaKnown RBP17.45■□□□□ 0.38
GDF9-201ENST00000296875 TNNI3KQ59H18 835 aa17.45■□□□□ 0.38
GDF9-201ENST00000296875 MAP4K1Q92918 833 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms