RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 KIF1BPQ96EK5 621 aa29.68■■■□□ 2.34
SHISA5-201ENST00000296444 MAP3K15Q6ZN16 1313 aa29.67■■■□□ 2.34
SHISA5-201ENST00000296444 RAB11FIP3O75154 756 aa29.67■■■□□ 2.34
SHISA5-201ENST00000296444 PTPN12Q05209 780 aaKnown RBP29.67■■■□□ 2.34
SHISA5-201ENST00000296444 TLR7Q9NYK1 1049 aaKnown RBP29.66■■■□□ 2.34
SHISA5-201ENST00000296444 RABL6Q3YEC7 729 aaPredicted RBP29.66■■■□□ 2.34
SHISA5-201ENST00000296444 KIF6Q6ZMV9 814 aa29.66■■■□□ 2.34
SHISA5-201ENST00000296444 CHMP3Q9Y3E7 222 aa29.66■■■□□ 2.34
SHISA5-201ENST00000296444 CCDC191Q8NCU4 936 aa29.65■■■□□ 2.34
SHISA5-201ENST00000296444 GIGYF2Q6Y7W6 1299 aaKnown RBP29.64■■■□□ 2.34
SHISA5-201ENST00000296444 DZIP3Q86Y13 1208 aaKnown RBP29.64■■■□□ 2.34
SHISA5-201ENST00000296444 ZNF594Q96JF6 807 aaPredicted RBP29.64■■■□□ 2.34
SHISA5-201ENST00000296444 C22orf23Q9BZE7 217 aa29.64■■■□□ 2.34
SHISA5-201ENST00000296444 EIF5P55010 431 aaKnown RBP29.64■■■□□ 2.34
SHISA5-201ENST00000296444 EAF2Q96CJ1 260 aaPredicted RBP29.64■■■□□ 2.34
SHISA5-201ENST00000296444 LINC00116Q8NCU8 138 aa29.63■■■□□ 2.33
SHISA5-201ENST00000296444 CCDC8Q9H0W5 538 aaPredicted RBP29.63■■■□□ 2.33
SHISA5-201ENST00000296444 STAP2Q9UGK3 403 aa29.63■■■□□ 2.33
SHISA5-201ENST00000296444 PI4K2BQ8TCG2 481 aa29.63■■■□□ 2.33
SHISA5-201ENST00000296444 QTRT2Q9H974 415 aaKnown RBP29.63■■■□□ 2.33
SHISA5-201ENST00000296444 CCDC87Q9NVE4 849 aa29.63■■■□□ 2.33
SHISA5-201ENST00000296444 CDC45O75419 566 aa29.62■■■□□ 2.33
SHISA5-201ENST00000296444 SEPT12Q8IYM1 358 aa29.62■■■□□ 2.33
SHISA5-201ENST00000296444 IL6STP40189 918 aaPredicted RBP29.61■■■□□ 2.33
SHISA5-201ENST00000296444 RILPL2Q969X0 211 aa29.61■■■□□ 2.33
SHISA5-201ENST00000296444 UBN2Q6ZU65 1347 aa29.61■■■□□ 2.33
SHISA5-201ENST00000296444 FAM177BA6PVY3 158 aa29.6■■■□□ 2.33
SHISA5-201ENST00000296444 G3BP1Q13283 466 aaKnown RBP eCLIP29.6■■■□□ 2.33
SHISA5-201ENST00000296444 NLRP10Q86W26 655 aa29.6■■■□□ 2.33
SHISA5-201ENST00000296444 AMIGO3Q86WK7 504 aa29.6■■■□□ 2.33
SHISA5-201ENST00000296444 IL25Q9H293 177 aa29.6■■■□□ 2.33
SHISA5-201ENST00000296444 THSD7AQ9UPZ6 1657 aa29.59■■■□□ 2.33
SHISA5-201ENST00000296444 TRIM6-TRIM34B2RNG4 842 aa29.59■■■□□ 2.33
SHISA5-201ENST00000296444 AACSQ86V21 672 aa29.59■■■□□ 2.33
SHISA5-201ENST00000296444 PUS3Q9BZE2 481 aaKnown RBP29.57■■■□□ 2.32
SHISA5-201ENST00000296444 HDAC5Q9UQL6 1122 aa29.57■■■□□ 2.32
SHISA5-201ENST00000296444 TFCP2Q12800 502 aa29.57■■■□□ 2.32
SHISA5-201ENST00000296444 GSE1Q14687 1217 aa29.57■■■□□ 2.32
SHISA5-201ENST00000296444 UPF2Q9HAU5 1272 aaKnown RBP29.57■■■□□ 2.32
SHISA5-201ENST00000296444 COPRSQ9NQ92 184 aa29.57■■■□□ 2.32
SHISA5-201ENST00000296444 ATRNO75882 1429 aa29.56■■■□□ 2.32
SHISA5-201ENST00000296444 TRPC5Q9UL62 973 aaPredicted RBP29.56■■■□□ 2.32
SHISA5-201ENST00000296444 ONECUT3O60422 494 aaPredicted RBP29.56■■■□□ 2.32
SHISA5-201ENST00000296444 TRIM28Q13263 835 aaKnown RBP29.56■■■□□ 2.32
SHISA5-201ENST00000296444 LRRC24Q50LG9 513 aa29.56■■■□□ 2.32
SHISA5-201ENST00000296444 HSP90AB4PQ58FF6 505 aa29.56■■■□□ 2.32
SHISA5-201ENST00000296444 CLASRPQ8N2M8 674 aaKnown RBP29.56■■■□□ 2.32
SHISA5-201ENST00000296444 GOLGB1Q14789 3259 aaKnown RBP29.55■■■□□ 2.32
SHISA5-201ENST00000296444 KIF2CQ99661 725 aa29.55■■■□□ 2.32
SHISA5-201ENST00000296444 TUBGCP6Q96RT7 1819 aa29.54■■■□□ 2.32
SHISA5-201ENST00000296444 ATG9AQ7Z3C6 839 aa29.54■■■□□ 2.32
SHISA5-201ENST00000296444 NUP98P52948 1817 aa29.53■■■□□ 2.32
SHISA5-201ENST00000296444 CAMTA2O94983 1202 aa29.53■■■□□ 2.32
SHISA5-201ENST00000296444 RTN4Q9NQC3 1192 aaKnown RBP29.53■■■□□ 2.32
SHISA5-201ENST00000296444 NDUFB9Q9Y6M9 179 aa29.53■■■□□ 2.32
SHISA5-201ENST00000296444 COL15A1P39059 1388 aa29.53■■■□□ 2.32
SHISA5-201ENST00000296444 ZBTB38Q8NAP3 1195 aaPredicted RBP29.53■■■□□ 2.32
SHISA5-201ENST00000296444 SMARCC1Q92922 1105 aaPredicted RBP29.52■■■□□ 2.32
SHISA5-201ENST00000296444 PCCAP05165 728 aaPredicted RBP29.52■■■□□ 2.32
SHISA5-201ENST00000296444 SUSD4Q5VX71 490 aa29.51■■■□□ 2.31
SHISA5-201ENST00000296444 ZNF34Q8IZ26 560 aa29.51■■■□□ 2.31
SHISA5-201ENST00000296444 IFIT2P09913 472 aaKnown RBP29.5■■■□□ 2.31
SHISA5-201ENST00000296444 TRMT112Q9UI30 125 aaKnown RBP29.5■■■□□ 2.31
SHISA5-201ENST00000296444 CHMLP26374 656 aa29.49■■■□□ 2.31
SHISA5-201ENST00000296444 BTAF1O14981 1849 aa29.49■■■□□ 2.31
SHISA5-201ENST00000296444 ERVV-1B6SEH8 477 aa29.48■■■□□ 2.31
SHISA5-201ENST00000296444 EDC3Q96F86 508 aaKnown RBP29.48■■■□□ 2.31
SHISA5-201ENST00000296444 ERC1Q8IUD2 1116 aa29.48■■■□□ 2.31
SHISA5-201ENST00000296444 DBNLQ9UJU6 430 aaKnown RBP29.48■■■□□ 2.31
SHISA5-201ENST00000296444 HCLS1P14317 486 aaPredicted RBP29.47■■■□□ 2.31
SHISA5-201ENST00000296444 RBM25P49756 843 aaKnown RBP29.47■■■□□ 2.31
SHISA5-201ENST00000296444 USP26Q9BXU7 913 aa29.47■■■□□ 2.31
SHISA5-201ENST00000296444 GREM2Q9H772 168 aa29.47■■■□□ 2.31
SHISA5-201ENST00000296444 TIMM10P62072 90 aa29.46■■■□□ 2.31
SHISA5-201ENST00000296444 NFKBIBQ15653 356 aa29.46■■■□□ 2.31
SHISA5-201ENST00000296444 ECHDC1Q9NTX5 307 aa29.46■■■□□ 2.31
SHISA5-201ENST00000296444 IRS4O14654 1257 aaPredicted RBP29.46■■■□□ 2.31
SHISA5-201ENST00000296444 TBC1D2Q9BYX2 928 aa29.46■■■□□ 2.31
SHISA5-201ENST00000296444 BOLA2Q9H3K6 86 aa29.46■■■□□ 2.31
SHISA5-201ENST00000296444 TNNI3KQ59H18 835 aa29.45■■■□□ 2.31
SHISA5-201ENST00000296444 TTLL11Q8NHH1 800 aa29.45■■■□□ 2.31
SHISA5-201ENST00000296444 DBNDD2Q9BQY9 259 aa29.45■■■□□ 2.31
SHISA5-201ENST00000296444 LRRC4BQ9NT99 713 aa29.45■■■□□ 2.31
SHISA5-201ENST00000296444 FPGT-TNNI3KV9GXZ4 949 aa29.45■■■□□ 2.31
SHISA5-201ENST00000296444 USP42Q9H9J4 1324 aaKnown RBP29.45■■■□□ 2.31
SHISA5-201ENST00000296444 CD2BP2O95400 341 aaKnown RBP29.45■■■□□ 2.3
SHISA5-201ENST00000296444 CHGBP05060 677 aa29.45■■■□□ 2.3
SHISA5-201ENST00000296444 SRP68Q9UHB9 627 aaKnown RBP29.45■■■□□ 2.3
SHISA5-201ENST00000296444 CSF1RP07333 972 aa29.44■■■□□ 2.3
SHISA5-201ENST00000296444 SPRYD3Q8NCJ5 442 aa29.44■■■□□ 2.3
SHISA5-201ENST00000296444 CCNL1Q9UK58 526 aaPredicted RBP29.44■■■□□ 2.3
SHISA5-201ENST00000296444 COL5A3P25940 1745 aaPredicted RBP29.43■■■□□ 2.3
SHISA5-201ENST00000296444 AOX1Q06278 1338 aa29.42■■■□□ 2.3
SHISA5-201ENST00000296444 ESYT1Q9BSJ8 1104 aa29.42■■■□□ 2.3
SHISA5-201ENST00000296444 NIP7Q9Y221 180 aaKnown RBP eCLIP29.42■■■□□ 2.3
SHISA5-201ENST00000296444 BICDL1Q6ZP65 573 aa29.41■■■□□ 2.3
SHISA5-201ENST00000296444 DAXXQ9UER7 740 aaPredicted RBP29.41■■■□□ 2.3
SHISA5-201ENST00000296444 HSP90AB3PQ58FF7 597 aa29.41■■■□□ 2.3
SHISA5-201ENST00000296444 BCL2L12Q9HB09 334 aa29.41■■■□□ 2.3
SHISA5-201ENST00000296444 PLA2G12BQ9BX93 195 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms