RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 MCM10Q7L590 875 aa15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 MBD3O95983 291 aa15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 NASPP49321 788 aaPredicted RBP15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 SMCR8Q8TEV9 937 aaPredicted RBP15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 C6orf50Q9HD87 102 aa15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 NSFL1CQ9UNZ2 370 aaKnown RBP15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 GUCY1B3Q02153 619 aa15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 TMEM67Q5HYA8 995 aa15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 DUSP27Q5VZP5 1158 aa15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 TRAPPC3LQ5T215 181 aa15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 ATP5J2-PTCD1G3V325 749 aa15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 AAMPQ13685 434 aa15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 FAM47CQ5HY64 1035 aa15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 MRVI1Q9Y6F6 885 aa15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 SPDYE3A6NKU9 549 aa15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 TPTE2Q6XPS3 522 aa15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 C8orf76Q96K31 380 aa15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 NOP56O00567 594 aaKnown RBP15.18■□□□□ 0.02
PLXNB1-201ENST00000296440 CSPG5O95196 566 aa15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 ZCRB1Q8TBF4 217 aaKnown RBP15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 ZSCAN31Q96LW9 406 aaPredicted RBP15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.17■□□□□ 0.022e-8■■□□□ 13.8
PLXNB1-201ENST00000296440 IQSEC3Q9UPP2 1182 aaPredicted RBP15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 WDR33Q9C0J8 1336 aaKnown RBP15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 CCDC8Q9H0W5 538 aaPredicted RBP15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 ANKRD50Q9ULJ7 1429 aa15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 RNF187Q5TA31 235 aaPredicted RBP15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 GOLGA1Q92805 767 aa15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 KIF1BPQ96EK5 621 aa15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 WIZO95785 1651 aa15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 APBA3O96018 575 aa15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 SPATA24Q86W54 205 aa15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 NUP88Q99567 741 aaPredicted RBP15.17■□□□□ 0.02
PLXNB1-201ENST00000296440 EPRSP07814 1512 aaKnown RBP15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 PSMC4P43686 418 aa15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 BBXQ8WY36 941 aaPredicted RBP15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 TIGD1Q96MW7 591 aa15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 GJC1P36383 396 aa15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 CCDC14Q49A88 953 aa15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 HEATR3Q7Z4Q2 680 aa15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 CDCA7Q9BWT1 371 aaPredicted RBP15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 LRRC27Q9C0I9 530 aa15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 ADAMTS8Q9UP79 889 aa15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 H0YIN7 160 aa15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 SLC8A3P57103 927 aa15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 USO1O60763 962 aaKnown RBP15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 CFAP58Q5T655 872 aa15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 BCS1LQ9Y276 419 aa15.16■□□□□ 0.02
PLXNB1-201ENST00000296440 FAM13AO94988 1023 aa15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 CYP7A1P22680 504 aa15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 RAB3GAP1Q15042 981 aa15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 ZBTB33Q86T24 672 aa15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 GSDMBQ8TAX9 411 aa15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 RBM27Q9P2N5 1060 aaKnown RBP15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 CCDC102AQ96A19 550 aa15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 ANKRD24Q8TF21 1146 aa15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 TTC12Q9H892 705 aaPredicted RBP15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 CCDC172P0C7W6 258 aa15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 LARGE2Q8N3Y3 721 aa15.15■□□□□ 0.02
PLXNB1-201ENST00000296440 RPGRIP1LQ68CZ1 1315 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 UBA7P41226 1012 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 SLC5A4Q9NY91 659 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 ATAD2Q6PL18 1390 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 GNPATO15228 680 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 CUL4BQ13620 913 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 CACYBPQ9HB71 228 aaKnown RBP15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 RAB11FIP3O75154 756 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 MYCP01106 439 aaPredicted RBP15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 ATXN8OSP0DMR3 200 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 CEP135Q66GS9 1140 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 H7C1D1 291 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 SNRKQ9NRH2 765 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 MSANTD4Q8NCY6 345 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 TNPO1Q92973 898 aaKnown RBP15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 HOOK2Q96ED9 719 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 CCDC87Q9NVE4 849 aa15.14■□□□□ 0.01
PLXNB1-201ENST00000296440 IFIT1BQ5T764 474 aaKnown RBP15.13■□□□□ 0.01
PLXNB1-201ENST00000296440 NOP9Q86U38 636 aaKnown RBP15.13■□□□□ 0.01
PLXNB1-201ENST00000296440 TSHZ2Q9NRE2 1034 aa15.13■□□□□ 0.01
PLXNB1-201ENST00000296440 CCDC89Q8N998 374 aa15.13■□□□□ 0.01
PLXNB1-201ENST00000296440 CCDC63Q8NA47 563 aa15.13■□□□□ 0.01
PLXNB1-201ENST00000296440 GOLIM4O00461 696 aa15.13■□□□□ 0.01
PLXNB1-201ENST00000296440 EEF2P13639 858 aaKnown RBP15.13■□□□□ 0.01
PLXNB1-201ENST00000296440 SPECC1Q5M775 1068 aa15.13■□□□□ 0.01
PLXNB1-201ENST00000296440 GSE1Q14687 1217 aa15.13■□□□□ 0.01
PLXNB1-201ENST00000296440 EXOC1Q9NV70 894 aa15.13■□□□□ 0.01
PLXNB1-201ENST00000296440 HARSP12081 509 aaKnown RBP15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 MAP3K2Q9Y2U5 619 aa15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 SH2D4AQ9H788 454 aa15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 NAA16Q6N069 864 aaPredicted RBP15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 PFDN4Q9NQP4 134 aa15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 ABT1Q9ULW3 272 aaKnown RBP15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 NUP62CLQ9H1M0 184 aa15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 EXOC6BQ9Y2D4 811 aa15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 XRCC6P12956 609 aaKnown RBP eCLIP15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 PDE3AQ14432 1141 aa15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 CCT6BQ92526 530 aa15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 SKIV2LQ15477 1246 aaKnown RBP15.12■□□□□ 0.01
PLXNB1-201ENST00000296440 CNNM3Q8NE01 707 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms