RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CUL4AQ13619 759 aa14.26□□□□□ -0.13
RHO-201ENST00000296271 TCEANC2Q96MN5 208 aa14.26□□□□□ -0.13
RHO-201ENST00000296271 CWC22Q9HCG8 908 aaKnown RBP14.26□□□□□ -0.13
RHO-201ENST00000296271 CASTP20810 708 aaKnown RBP14.25□□□□□ -0.13
RHO-201ENST00000296271 RFX5P48382 616 aaPredicted RBP14.25□□□□□ -0.13
RHO-201ENST00000296271 PTPN12Q05209 780 aaKnown RBP14.25□□□□□ -0.13
RHO-201ENST00000296271 RUFY3Q7L099 469 aa14.25□□□□□ -0.13
RHO-201ENST00000296271 RRAGDQ9NQL2 400 aaPredicted RBP14.25□□□□□ -0.13
RHO-201ENST00000296271 CHMP3Q9Y3E7 222 aa14.25□□□□□ -0.13
RHO-201ENST00000296271 WDR17Q8IZU2 1322 aa14.25□□□□□ -0.13
RHO-201ENST00000296271 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
RHO-201ENST00000296271 DBNLQ9UJU6 430 aaKnown RBP14.25□□□□□ -0.13
RHO-201ENST00000296271 TTC14Q96N46 770 aa14.24□□□□□ -0.13
RHO-201ENST00000296271 CPDO75976 1380 aa14.24□□□□□ -0.13
RHO-201ENST00000296271 GLI3P10071 1580 aa14.24□□□□□ -0.13
RHO-201ENST00000296271 GOLGA6L22H0YM25 854 aa14.24□□□□□ -0.13
RHO-201ENST00000296271 LMBR1LQ6UX01 489 aa14.24□□□□□ -0.13
RHO-201ENST00000296271 ZNF589Q86UQ0 364 aaPredicted RBP14.24□□□□□ -0.13
RHO-201ENST00000296271 ERC1Q8IUD2 1116 aa14.24□□□□□ -0.13
RHO-201ENST00000296271 KAT6BQ8WYB5 2073 aa14.23□□□□□ -0.13
RHO-201ENST00000296271 KLHL40Q2TBA0 621 aa14.23□□□□□ -0.13
RHO-201ENST00000296271 JAKMIP1Q96N16 626 aaKnown RBP14.23□□□□□ -0.13
RHO-201ENST00000296271 KDM4FA0A1W2PPD8 638 aa14.23□□□□□ -0.13
RHO-201ENST00000296271 CASP7P55210 303 aa14.23□□□□□ -0.13
RHO-201ENST00000296271 ZNF594Q96JF6 807 aaPredicted RBP14.23□□□□□ -0.13
RHO-201ENST00000296271 DBNDD2Q9BQY9 259 aa14.23□□□□□ -0.13
RHO-201ENST00000296271 MRC1P22897 1456 aa14.22□□□□□ -0.13
RHO-201ENST00000296271 PKD1L3Q7Z443 1732 aa14.22□□□□□ -0.13
RHO-201ENST00000296271 BRD1O95696 1058 aa14.22□□□□□ -0.13
RHO-201ENST00000296271 MRE11P49959 708 aa14.22□□□□□ -0.13
RHO-201ENST00000296271 SKOR2Q2VWA4 1001 aaPredicted RBP14.22□□□□□ -0.13
RHO-201ENST00000296271 EVI5LQ96CN4 794 aa14.22□□□□□ -0.13
RHO-201ENST00000296271 CCDC85AQ96PX6 553 aaPredicted RBP14.22□□□□□ -0.13
RHO-201ENST00000296271 SEC62Q99442 399 aaKnown RBP14.22□□□□□ -0.13
RHO-201ENST00000296271 FSD1Q9BTV5 496 aa14.22□□□□□ -0.13
RHO-201ENST00000296271 AFDNP55196 1824 aaKnown RBP14.22□□□□□ -0.13
RHO-201ENST00000296271 CCDC129Q6ZRS4 1044 aa14.22□□□□□ -0.13
RHO-201ENST00000296271 RBM8AQ9Y5S9 174 aaKnown RBP14.22□□□□□ -0.13
RHO-201ENST00000296271 COL5A2P05997 1499 aaPredicted RBP14.21□□□□□ -0.13
RHO-201ENST00000296271 SOS2Q07890 1332 aaPredicted RBP14.21□□□□□ -0.13
RHO-201ENST00000296271 NECAB1Q8N987 351 aa14.21□□□□□ -0.13
RHO-201ENST00000296271 IL17RAQ96F46 866 aa14.21□□□□□ -0.13
RHO-201ENST00000296271 GPATCH3Q96I76 525 aa14.21□□□□□ -0.13
RHO-201ENST00000296271 ZSCAN23Q3MJ62 389 aa14.21□□□□□ -0.14
RHO-201ENST00000296271 PLBD2Q8NHP8 589 aa14.21□□□□□ -0.14
RHO-201ENST00000296271 DNAJC2Q99543 621 aaKnown RBP14.21□□□□□ -0.14
RHO-201ENST00000296271 TMEM63CQ9P1W3 806 aa14.21□□□□□ -0.14
RHO-201ENST00000296271 ARFGEF2Q9Y6D5 1785 aa14.21□□□□□ -0.14
RHO-201ENST00000296271 TCHHQ07283 1943 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 CCDC171Q6TFL3 1326 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 LMTK3Q96Q04 1460 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 COL15A1P39059 1388 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 GADD45BO75293 160 aaPredicted RBP14.2□□□□□ -0.14
RHO-201ENST00000296271 IL2RBP14784 551 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 EVA1CP58658 441 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 FOXO4P98177 505 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 ST3GAL1Q11201 340 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 TNNI3KQ59H18 835 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 ASAP1Q9ULH1 1129 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 FPGT-TNNI3KV9GXZ4 949 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 PCDH11XQ9BZA7 1347 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 PCDH11YQ9BZA8 1340 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 STRCQ7RTU9 1775 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 RPAP1Q9BWH6 1393 aaPredicted RBP14.2□□□□□ -0.14
RHO-201ENST00000296271 MCM2P49736 904 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 TIMM10P62072 90 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 NECTIN1Q15223 517 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 CCDC83Q8IWF9 413 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 SYNE4Q8N205 404 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 COPRSQ9NQ92 184 aa14.2□□□□□ -0.14
RHO-201ENST00000296271 KCNJ4P48050 445 aa14.19□□□□□ -0.14
RHO-201ENST00000296271 LRRC24Q50LG9 513 aa14.19□□□□□ -0.14
RHO-201ENST00000296271 CREB3L3Q68CJ9 461 aa14.19□□□□□ -0.14
RHO-201ENST00000296271 DDX46Q7L014 1031 aaKnown RBP14.19□□□□□ -0.14
RHO-201ENST00000296271 RABL6Q3YEC7 729 aaPredicted RBP14.19□□□□□ -0.14
RHO-201ENST00000296271 PUS3Q9BZE2 481 aaKnown RBP14.19□□□□□ -0.14
RHO-201ENST00000296271 PRIM1P49642 420 aaKnown RBP14.18□□□□□ -0.14
RHO-201ENST00000296271 RUFY2Q8WXA3 655 aa14.18□□□□□ -0.14
RHO-201ENST00000296271 INTS4Q96HW7 963 aaKnown RBP14.18□□□□□ -0.14
RHO-201ENST00000296271 PDRG1Q9NUG6 133 aa14.18□□□□□ -0.14
RHO-201ENST00000296271 HDAC5Q9UQL6 1122 aa14.18□□□□□ -0.14
RHO-201ENST00000296271 SLC27A2O14975 620 aa14.17□□□□□ -0.14
RHO-201ENST00000296271 MAP4K1Q92918 833 aa14.17□□□□□ -0.14
RHO-201ENST00000296271 NEUROD6Q96NK8 337 aa14.17□□□□□ -0.14
RHO-201ENST00000296271 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.17□□□□□ -0.14
RHO-201ENST00000296271 H7C1W4 665 aa14.17□□□□□ -0.14
RHO-201ENST00000296271 ME3Q16798 604 aa14.17□□□□□ -0.14
RHO-201ENST00000296271 ATG9AQ7Z3C6 839 aa14.17□□□□□ -0.14
RHO-201ENST00000296271 RBSNQ9H1K0 784 aa14.17□□□□□ -0.14
RHO-201ENST00000296271 LIMCH1Q9UPQ0 1083 aa14.17□□□□□ -0.14
RHO-201ENST00000296271 KCPQ6ZWJ8 1503 aa14.16□□□□□ -0.14
RHO-201ENST00000296271 A0A0G2JLW4 131 aa14.16□□□□□ -0.14
RHO-201ENST00000296271 SYCE3A1L190 88 aa14.16□□□□□ -0.14
RHO-201ENST00000296271 DNAJC10Q8IXB1 793 aa14.16□□□□□ -0.14
RHO-201ENST00000296271 CARD10Q9BWT7 1032 aa14.16□□□□□ -0.14
RHO-201ENST00000296271 BTG4Q9NY30 223 aa14.16□□□□□ -0.14
RHO-201ENST00000296271 TPCN1Q9ULQ1 816 aa14.16□□□□□ -0.14
RHO-201ENST00000296271 ERBB4Q15303 1308 aa14.16□□□□□ -0.14
RHO-201ENST00000296271 SYT1P21579 422 aa14.16□□□□□ -0.14
RHO-201ENST00000296271 ZSWIM6Q9HCJ5 1215 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms