RNA–Protein interactions for RNA: ENST00000296031.4

CXCL2-201, Transcript of C-X-C motif chemokine ligand 2, humanhuman

TSL 1 (best)

Gene CXCL2, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL2-201ENST00000296031 SLC4A2P04920 1241 aa32.08■■■□□ 2.73
CXCL2-201ENST00000296031 ARHGAP27Q6ZUM4 889 aa32.08■■■□□ 2.73
CXCL2-201ENST00000296031 DDX58O95786 925 aaKnown RBP32.07■■■□□ 2.72
CXCL2-201ENST00000296031 MASTLQ96GX5 879 aa32.07■■■□□ 2.72
CXCL2-201ENST00000296031 STYK1Q6J9G0 422 aa32.06■■■□□ 2.72
CXCL2-201ENST00000296031 ISCA1Q9BUE6 129 aa32.06■■■□□ 2.72
CXCL2-201ENST00000296031 CACNA1FO60840 1977 aa32.05■■■□□ 2.72
CXCL2-201ENST00000296031 ATP5J2-PTCD1G3V325 749 aa32.05■■■□□ 2.72
CXCL2-201ENST00000296031 ZNF428Q96B54 188 aa32.05■■■□□ 2.72
CXCL2-201ENST00000296031 RIC1Q4ADV7 1423 aa32.04■■■□□ 2.72
CXCL2-201ENST00000296031 SLFN5Q08AF3 891 aa32.04■■■□□ 2.72
CXCL2-201ENST00000296031 RNF123Q5XPI4 1314 aa32.03■■■□□ 2.72
CXCL2-201ENST00000296031 NPR1P16066 1061 aa32.03■■■□□ 2.72
CXCL2-201ENST00000296031 G2E3Q7L622 706 aa32.03■■■□□ 2.72
CXCL2-201ENST00000296031 CNKSR1Q969H4 720 aa32.03■■■□□ 2.72
CXCL2-201ENST00000296031 TRMT112Q9UI30 125 aaKnown RBP32.03■■■□□ 2.72
CXCL2-201ENST00000296031 TRIM28Q13263 835 aaKnown RBP32.02■■■□□ 2.72
CXCL2-201ENST00000296031 MYD88Q99836 296 aa32.02■■■□□ 2.72
CXCL2-201ENST00000296031 SLX4Q8IY92 1834 aa32.02■■■□□ 2.72
CXCL2-201ENST00000296031 SLC10A5Q5PT55 438 aa32.01■■■□□ 2.71
CXCL2-201ENST00000296031 CDCA7LQ96GN5 454 aa32.01■■■□□ 2.71
CXCL2-201ENST00000296031 ZNF219Q9P2Y4 722 aaPredicted RBP32.01■■■□□ 2.71
CXCL2-201ENST00000296031 CRY2Q49AN0 593 aa32■■■□□ 2.71
CXCL2-201ENST00000296031 KSR2Q6VAB6 950 aa32■■■□□ 2.71
CXCL2-201ENST00000296031 PI4KAP2A4QPH2 592 aa31.99■■■□□ 2.71
CXCL2-201ENST00000296031 PRPF40BQ6NWY9 871 aaKnown RBP31.99■■■□□ 2.71
CXCL2-201ENST00000296031 PI4KAP1Q8N8J0 262 aa31.99■■■□□ 2.71
CXCL2-201ENST00000296031 MAP3K2Q9Y2U5 619 aa31.99■■■□□ 2.71
CXCL2-201ENST00000296031 SH3TC1Q8TE82 1336 aa31.99■■■□□ 2.71
CXCL2-201ENST00000296031 FLIIQ13045 1269 aa31.98■■■□□ 2.71
CXCL2-201ENST00000296031 SYNE4Q8N205 404 aa31.98■■■□□ 2.71
CXCL2-201ENST00000296031 METTL22Q9BUU2 404 aaPredicted RBP31.98■■■□□ 2.71
CXCL2-201ENST00000296031 ADCY9O60503 1353 aa31.97■■■□□ 2.71
CXCL2-201ENST00000296031 C21orf2O43822 256 aa31.97■■■□□ 2.71
CXCL2-201ENST00000296031 RPGRQ92834 1020 aaKnown RBP31.97■■■□□ 2.71
CXCL2-201ENST00000296031 NLRP3Q96P20 1036 aa31.97■■■□□ 2.71
CXCL2-201ENST00000296031 HCLS1P14317 486 aaPredicted RBP31.96■■■□□ 2.71
CXCL2-201ENST00000296031 C3orf67Q6ZVT6 689 aa31.96■■■□□ 2.71
CXCL2-201ENST00000296031 TRMT2AQ8IZ69 625 aaKnown RBP31.96■■■□□ 2.71
CXCL2-201ENST00000296031 LAMB2P55268 1798 aa31.96■■■□□ 2.71
CXCL2-201ENST00000296031 ALDH1B1P30837 517 aa31.94■■■□□ 2.7
CXCL2-201ENST00000296031 FKBP5Q13451 457 aaPredicted RBP31.94■■■□□ 2.7
CXCL2-201ENST00000296031 FAM89AQ96GI7 184 aa31.94■■■□□ 2.7
CXCL2-201ENST00000296031 DDX60Q8IY21 1712 aaKnown RBP31.93■■■□□ 2.7
CXCL2-201ENST00000296031 HOXA10P31260 410 aaPredicted RBP31.93■■■□□ 2.7
CXCL2-201ENST00000296031 RASSF7Q02833 373 aa31.93■■■□□ 2.7
CXCL2-201ENST00000296031 RTL5Q5HYW3 569 aaPredicted RBP31.93■■■□□ 2.7
CXCL2-201ENST00000296031 CCDC191Q8NCU4 936 aa31.93■■■□□ 2.7
CXCL2-201ENST00000296031 ZNF784Q8NCA9 323 aaPredicted RBP31.92■■■□□ 2.7
CXCL2-201ENST00000296031 SBF1O95248 1867 aa31.92■■■□□ 2.7
CXCL2-201ENST00000296031 NEXNQ0ZGT2 675 aa31.91■■■□□ 2.7
CXCL2-201ENST00000296031 CWC25Q9NXE8 425 aaPredicted RBP31.91■■■□□ 2.7
CXCL2-201ENST00000296031 HNRNPUQ00839 825 aaKnown RBP eCLIP31.9■■■□□ 2.7
CXCL2-201ENST00000296031 RBM17Q96I25 401 aaKnown RBP31.9■■■□□ 2.7
CXCL2-201ENST00000296031 FER1L6Q2WGJ9 1857 aa31.89■■■□□ 2.7
CXCL2-201ENST00000296031 C9orf131Q5VYM1 1079 aa31.89■■■□□ 2.7
CXCL2-201ENST00000296031 ZBTB38Q8NAP3 1195 aaPredicted RBP31.89■■■□□ 2.7
CXCL2-201ENST00000296031 C7orf43Q8WVR3 580 aa31.89■■■□□ 2.7
CXCL2-201ENST00000296031 NFKBIEO00221 500 aa31.88■■■□□ 2.69
CXCL2-201ENST00000296031 IGKV5-2P06315 115 aa31.88■■■□□ 2.69
CXCL2-201ENST00000296031 SOGA3Q5TF21 947 aa31.88■■■□□ 2.69
CXCL2-201ENST00000296031 CRAMP1Q96RY5 1269 aa31.88■■■□□ 2.69
CXCL2-201ENST00000296031 DNAAF4Q8WXU2 420 aa31.87■■■□□ 2.69
CXCL2-201ENST00000296031 CCDC88AQ3V6T2 1871 aa31.86■■■□□ 2.69
CXCL2-201ENST00000296031 IRS4O14654 1257 aaPredicted RBP31.86■■■□□ 2.69
CXCL2-201ENST00000296031 RNF181Q9P0P0 153 aa31.86■■■□□ 2.69
CXCL2-201ENST00000296031 PCCAP05165 728 aaPredicted RBP31.85■■■□□ 2.69
CXCL2-201ENST00000296031 CWF19L2Q2TBE0 894 aaKnown RBP31.85■■■□□ 2.69
CXCL2-201ENST00000296031 CCDC93Q567U6 631 aa31.85■■■□□ 2.69
CXCL2-201ENST00000296031 OLFM4Q6UX06 510 aa31.84■■■□□ 2.69
CXCL2-201ENST00000296031 JARID2Q92833 1246 aaPredicted RBP31.84■■■□□ 2.69
CXCL2-201ENST00000296031 NEURL1BA8MQ27 555 aa31.83■■■□□ 2.69
CXCL2-201ENST00000296031 HSP90B1P14625 803 aaKnown RBP31.83■■■□□ 2.69
CXCL2-201ENST00000296031 ABCC4O15439 1325 aa31.82■■■□□ 2.68
CXCL2-201ENST00000296031 LMNB1P20700 586 aa31.82■■■□□ 2.68
CXCL2-201ENST00000296031 MRPL50Q8N5N7 158 aaKnown RBP31.82■■■□□ 2.68
CXCL2-201ENST00000296031 TAOK3Q9H2K8 898 aa31.82■■■□□ 2.68
CXCL2-201ENST00000296031 F6X3S4 739 aa31.81■■■□□ 2.68
CXCL2-201ENST00000296031 PPEF1O14829 653 aaPredicted RBP31.81■■■□□ 2.68
CXCL2-201ENST00000296031 CT47B1P0C2W7 299 aaPredicted RBP31.81■■■□□ 2.68
CXCL2-201ENST00000296031 PRELPP51888 382 aa31.81■■■□□ 2.68
CXCL2-201ENST00000296031 SF3B3Q15393 1217 aaKnown RBP31.81■■■□□ 2.68
CXCL2-201ENST00000296031 DDX46Q7L014 1031 aaKnown RBP31.81■■■□□ 2.68
CXCL2-201ENST00000296031 LINS1Q8NG48 757 aa31.81■■■□□ 2.68
CXCL2-201ENST00000296031 SSH1Q8WYL5 1049 aa31.81■■■□□ 2.68
CXCL2-201ENST00000296031 TAF1P21675 1872 aa31.8■■■□□ 2.68
CXCL2-201ENST00000296031 ZNF526Q8TF50 670 aaPredicted RBP31.8■■■□□ 2.68
CXCL2-201ENST00000296031 LTBP3Q9NS15 1303 aa31.79■■■□□ 2.68
CXCL2-201ENST00000296031 ALDH1L2Q3SY69 923 aa31.79■■■□□ 2.68
CXCL2-201ENST00000296031 RTKN2Q8IZC4 609 aa31.79■■■□□ 2.68
CXCL2-201ENST00000296031 BCL2L13Q9BXK5 485 aa31.79■■■□□ 2.68
CXCL2-201ENST00000296031 TIAM2Q8IVF5 1701 aa31.78■■■□□ 2.68
CXCL2-201ENST00000296031 BBOX1O75936 387 aa31.77■■■□□ 2.68
CXCL2-201ENST00000296031 GCKRQ14397 625 aa31.77■■■□□ 2.68
CXCL2-201ENST00000296031 CC2D2BQ6DHV5 1058 aa31.77■■■□□ 2.68
CXCL2-201ENST00000296031 CDHR2Q9BYE9 1310 aa31.76■■■□□ 2.68
CXCL2-201ENST00000296031 GRAPQ13588 217 aa31.76■■■□□ 2.67
CXCL2-201ENST00000296031 SLC51AQ86UW1 340 aa31.76■■■□□ 2.67
CXCL2-201ENST00000296031 GRAPLQ8TC17 118 aaPredicted RBP31.76■■■□□ 2.67
CXCL2-201ENST00000296031 DICER1Q9UPY3 1922 aaKnown RBP31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms