RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
CNOT9-202ENST00000295701 GNAT3A8MTJ3 354 aa12.51□□□□□ -0.41
CNOT9-202ENST00000295701 H0YIN7 160 aa12.51□□□□□ -0.41
CNOT9-202ENST00000295701 LMNB1P20700 586 aa12.51□□□□□ -0.41
CNOT9-202ENST00000295701 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
CNOT9-202ENST00000295701 TEFQ10587 303 aa12.51□□□□□ -0.41
CNOT9-202ENST00000295701 FSTL1Q12841 308 aa12.51□□□□□ -0.41
CNOT9-202ENST00000295701 ZNF710Q8N1W2 664 aa12.51□□□□□ -0.41
CNOT9-202ENST00000295701 ZNF622Q969S3 477 aaKnown RBP eCLIP12.51□□□□□ -0.41
CNOT9-202ENST00000295701 HEG1Q9ULI3 1381 aa12.51□□□□□ -0.41
CNOT9-202ENST00000295701 GLTPD2A6NH11 291 aa12.5□□□□□ -0.41
CNOT9-202ENST00000295701 PRR5LQ6MZQ0 368 aa12.5□□□□□ -0.41
CNOT9-202ENST00000295701 HS6ST3Q8IZP7 471 aa12.5□□□□□ -0.41
CNOT9-202ENST00000295701 KLRG1Q96E93 195 aa12.5□□□□□ -0.41
CNOT9-202ENST00000295701 COL11A2P13942 1736 aaPredicted RBP12.5□□□□□ -0.41
CNOT9-202ENST00000295701 DICER1Q9UPY3 1922 aaKnown RBP12.49□□□□□ -0.41
CNOT9-202ENST00000295701 SLX4Q8IY92 1834 aa12.49□□□□□ -0.41
CNOT9-202ENST00000295701 TIAM2Q8IVF5 1701 aa12.49□□□□□ -0.41
CNOT9-202ENST00000295701 A0A087WZG4 1122 aa12.49□□□□□ -0.41
CNOT9-202ENST00000295701 PRAMEF22A3QJZ6 481 aa12.49□□□□□ -0.41
CNOT9-202ENST00000295701 POTECB2RU33 542 aa12.49□□□□□ -0.41
CNOT9-202ENST00000295701 C21orf2O43822 256 aa12.49□□□□□ -0.41
CNOT9-202ENST00000295701 CAMTA2O94983 1202 aa12.49□□□□□ -0.41
CNOT9-202ENST00000295701 GAS2L2Q8NHY3 880 aa12.49□□□□□ -0.41
CNOT9-202ENST00000295701 USP16Q9Y5T5 823 aa12.49□□□□□ -0.41
CNOT9-202ENST00000295701 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
CNOT9-202ENST00000295701 PRKAR2BP31323 418 aa12.48□□□□□ -0.41
CNOT9-202ENST00000295701 SCN7AQ01118 1682 aa12.48□□□□□ -0.41
CNOT9-202ENST00000295701 VEGFAP15692 232 aaPredicted RBP12.47□□□□□ -0.41
CNOT9-202ENST00000295701 IL6STP40189 918 aaPredicted RBP12.47□□□□□ -0.41
CNOT9-202ENST00000295701 COL13A1Q5TAT6 717 aaPredicted RBP12.47□□□□□ -0.41
CNOT9-202ENST00000295701 SMC1BQ8NDV3 1235 aa12.47□□□□□ -0.41
CNOT9-202ENST00000295701 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
CNOT9-202ENST00000295701 BRIP1Q9BX63 1249 aa12.47□□□□□ -0.41
CNOT9-202ENST00000295701 TEX13AQ9BXU3 409 aaPredicted RBP12.47□□□□□ -0.41
CNOT9-202ENST00000295701 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
CNOT9-202ENST00000295701 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.41
CNOT9-202ENST00000295701 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
CNOT9-202ENST00000295701 BTBD11A6QL63 1104 aa12.46□□□□□ -0.41
CNOT9-202ENST00000295701 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
CNOT9-202ENST00000295701 DCTN1Q14203 1278 aa12.46□□□□□ -0.41
CNOT9-202ENST00000295701 JMYQ8N9B5 988 aa12.46□□□□□ -0.41
CNOT9-202ENST00000295701 ZC3H4Q9UPT8 1303 aaKnown RBP12.45□□□□□ -0.42
CNOT9-202ENST00000295701 PDE6BP35913 854 aa12.45□□□□□ -0.42
CNOT9-202ENST00000295701 MCM10Q7L590 875 aa12.45□□□□□ -0.42
CNOT9-202ENST00000295701 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
CNOT9-202ENST00000295701 SETDB2Q96T68 719 aa12.45□□□□□ -0.42
CNOT9-202ENST00000295701 BCORQ6W2J9 1755 aa12.45□□□□□ -0.42
CNOT9-202ENST00000295701 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
CNOT9-202ENST00000295701 HOXB1P14653 301 aaPredicted RBP12.44□□□□□ -0.42
CNOT9-202ENST00000295701 ERFEQ4G0M1 354 aa12.44□□□□□ -0.42
CNOT9-202ENST00000295701 DDNO94850 711 aaPredicted RBP12.43□□□□□ -0.42
CNOT9-202ENST00000295701 SRGNP10124 158 aa12.43□□□□□ -0.42
CNOT9-202ENST00000295701 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
CNOT9-202ENST00000295701 FAM177BA6PVY3 158 aa12.42□□□□□ -0.42
CNOT9-202ENST00000295701 NBPF26B4DH59 902 aa12.42□□□□□ -0.42
CNOT9-202ENST00000295701 NPHP1O15259 732 aa12.42□□□□□ -0.42
CNOT9-202ENST00000295701 U2AF1L5P0DN76 240 aaPredicted RBP12.42□□□□□ -0.42
CNOT9-202ENST00000295701 PPP2R1AP30153 589 aa12.42□□□□□ -0.42
CNOT9-202ENST00000295701 U2AF1Q01081 240 aaKnown RBP eCLIP12.42□□□□□ -0.42
CNOT9-202ENST00000295701 PRPF40BQ6NWY9 871 aaKnown RBP12.42□□□□□ -0.42
CNOT9-202ENST00000295701 NBPF10Q6P3W6 841 aaKnown RBP12.42□□□□□ -0.42
CNOT9-202ENST00000295701 OLFM4Q6UX06 510 aa12.42□□□□□ -0.42
CNOT9-202ENST00000295701 NPM2Q86SE8 214 aaKnown RBP12.42□□□□□ -0.42
CNOT9-202ENST00000295701 NBPF15Q8N660 670 aa12.42□□□□□ -0.42
CNOT9-202ENST00000295701 HS3ST6Q96QI5 342 aa12.42□□□□□ -0.42
CNOT9-202ENST00000295701 MIS18AQ9NYP9 233 aa12.42□□□□□ -0.42
CNOT9-202ENST00000295701 PPP1R37O75864 691 aa12.41□□□□□ -0.42
CNOT9-202ENST00000295701 ST5P78524 1137 aa12.41□□□□□ -0.42
CNOT9-202ENST00000295701 STYK1Q6J9G0 422 aa12.41□□□□□ -0.42
CNOT9-202ENST00000295701 C7orf43Q8WVR3 580 aa12.41□□□□□ -0.42
CNOT9-202ENST00000295701 CNKSR1Q969H4 720 aa12.41□□□□□ -0.42
CNOT9-202ENST00000295701 MASTLQ96GX5 879 aa12.41□□□□□ -0.42
CNOT9-202ENST00000295701 CFAP53Q96M91 514 aa12.41□□□□□ -0.42
CNOT9-202ENST00000295701 TAOK3Q9H2K8 898 aa12.41□□□□□ -0.42
CNOT9-202ENST00000295701 PDZRN3Q9UPQ7 1066 aa12.41□□□□□ -0.42
CNOT9-202ENST00000295701 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
CNOT9-202ENST00000295701 SNRPA1P09661 255 aaKnown RBP12.4□□□□□ -0.42
CNOT9-202ENST00000295701 HLFQ16534 295 aa12.4□□□□□ -0.42
CNOT9-202ENST00000295701 NBPF5PQ86XG9 351 aaPredicted RBP12.4□□□□□ -0.42
CNOT9-202ENST00000295701 ZSWIM6Q9HCJ5 1215 aa12.4□□□□□ -0.42
CNOT9-202ENST00000295701 NUDCQ9Y266 331 aa12.4□□□□□ -0.42
CNOT9-202ENST00000295701 DLG5Q8TDM6 1919 aa12.4□□□□□ -0.42
CNOT9-202ENST00000295701 LTBP3Q9NS15 1303 aa12.39□□□□□ -0.43
CNOT9-202ENST00000295701 POTEB3A0JP26 581 aa12.39□□□□□ -0.43
CNOT9-202ENST00000295701 HSPA1AP0DMV8 641 aaKnown RBP12.39□□□□□ -0.43
CNOT9-202ENST00000295701 HSPA1BP0DMV9 641 aaKnown RBP12.39□□□□□ -0.43
CNOT9-202ENST00000295701 POTEBQ6S5H4 581 aa12.39□□□□□ -0.43
CNOT9-202ENST00000295701 CLEC4GQ6UXB4 293 aa12.39□□□□□ -0.43
CNOT9-202ENST00000295701 RTF1Q92541 710 aaKnown RBP12.39□□□□□ -0.43
CNOT9-202ENST00000295701 NIP7Q9Y221 180 aaKnown RBP eCLIP12.39□□□□□ -0.43
CNOT9-202ENST00000295701 C2orf72A6NCS6 295 aa12.38□□□□□ -0.43
CNOT9-202ENST00000295701 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
CNOT9-202ENST00000295701 ZNF277Q9NRM2 450 aaPredicted RBP12.38□□□□□ -0.43
CNOT9-202ENST00000295701 NUP98P52948 1817 aa12.37□□□□□ -0.43
CNOT9-202ENST00000295701 TAF7Q15545 349 aaPredicted RBP12.37□□□□□ -0.43
CNOT9-202ENST00000295701 MKRN1Q9UHC7 482 aaKnown RBP12.37□□□□□ -0.43
CNOT9-202ENST00000295701 KLRG2A4D1S0 409 aaPredicted RBP12.36□□□□□ -0.43
CNOT9-202ENST00000295701 NPR1P16066 1061 aa12.36□□□□□ -0.43
CNOT9-202ENST00000295701 SLC51AQ86UW1 340 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms