RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 BRD4O60885 1362 aaPredicted RBP19.16■□□□□ 0.66
LRRC58-201ENST00000295628 CRCPO75575 148 aa19.16■□□□□ 0.66
LRRC58-201ENST00000295628 GDPD2Q9HCC8 539 aa19.16■□□□□ 0.66
LRRC58-201ENST00000295628 ARID5AQ03989 594 aa19.16■□□□□ 0.66
LRRC58-201ENST00000295628 AKAP2Q9Y2D5 859 aa19.16■□□□□ 0.66
LRRC58-201ENST00000295628 TRIM7Q9C029 511 aa19.16■□□□□ 0.66
LRRC58-201ENST00000295628 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
LRRC58-201ENST00000295628 EHBP1Q8NDI1 1231 aa19.15■□□□□ 0.66
LRRC58-201ENST00000295628 ARFGAP3Q9NP61 516 aa19.15■□□□□ 0.66
LRRC58-201ENST00000295628 CCDC25Q86WR0 208 aa19.15■□□□□ 0.66
LRRC58-201ENST00000295628 PAXBP1Q9Y5B6 917 aa19.15■□□□□ 0.66
LRRC58-201ENST00000295628 NEMFO60524 1076 aa19.15■□□□□ 0.66
LRRC58-201ENST00000295628 CCDC170Q8IYT3 715 aa19.15■□□□□ 0.66
LRRC58-201ENST00000295628 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
LRRC58-201ENST00000295628 ZPR1O75312 459 aa19.15■□□□□ 0.66
LRRC58-201ENST00000295628 TRIM47Q96LD4 638 aa19.15■□□□□ 0.66
LRRC58-201ENST00000295628 RFC1P35251 1148 aaPredicted RBP19.15■□□□□ 0.66
LRRC58-201ENST00000295628 VTI1AQ96AJ9 217 aa19.15■□□□□ 0.66
LRRC58-201ENST00000295628 CCDC172P0C7W6 258 aa19.15■□□□□ 0.66
LRRC58-201ENST00000295628 CCDC65Q8IXS2 484 aa19.15■□□□□ 0.66
LRRC58-201ENST00000295628 IFIT1P09914 478 aaKnown RBP19.14■□□□□ 0.65
LRRC58-201ENST00000295628 KRT222Q8N1A0 295 aa19.14■□□□□ 0.65
LRRC58-201ENST00000295628 STIM2Q9P246 746 aa19.14■□□□□ 0.65
LRRC58-201ENST00000295628 TFIP11Q9UBB9 837 aaKnown RBP19.14■□□□□ 0.65
LRRC58-201ENST00000295628 PNISRQ8TF01 805 aaKnown RBP19.14■□□□□ 0.65
LRRC58-201ENST00000295628 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.65
LRRC58-201ENST00000295628 FAM212AQ96EL1 285 aa19.14■□□□□ 0.65
LRRC58-201ENST00000295628 CAPZA3Q96KX2 299 aa19.14■□□□□ 0.65
LRRC58-201ENST00000295628 PIP4K2BP78356 416 aa19.14■□□□□ 0.65
LRRC58-201ENST00000295628 CCT6BQ92526 530 aa19.13■□□□□ 0.65
LRRC58-201ENST00000295628 STMN2Q93045 179 aa19.13■□□□□ 0.65
LRRC58-201ENST00000295628 FAM114A2Q9NRY5 505 aa19.13■□□□□ 0.65
LRRC58-201ENST00000295628 CPLX4Q7Z7G2 160 aa19.13■□□□□ 0.65
LRRC58-201ENST00000295628 VPS18Q9P253 973 aa19.13■□□□□ 0.65
LRRC58-201ENST00000295628 RBM27Q9P2N5 1060 aaKnown RBP19.13■□□□□ 0.65
LRRC58-201ENST00000295628 OPA1O60313 960 aa19.13■□□□□ 0.65
LRRC58-201ENST00000295628 PPFIA3O75145 1194 aa19.13■□□□□ 0.65
LRRC58-201ENST00000295628 CAPN2P17655 700 aa19.12■□□□□ 0.65
LRRC58-201ENST00000295628 PPP2R1AP30153 589 aa19.12■□□□□ 0.65
LRRC58-201ENST00000295628 UBASH3AP57075 661 aa19.12■□□□□ 0.65
LRRC58-201ENST00000295628 CEP85LQ5SZL2 805 aa19.12■□□□□ 0.65
LRRC58-201ENST00000295628 WHAMMQ8TF30 809 aa19.12■□□□□ 0.65
LRRC58-201ENST00000295628 RSRC1Q96IZ7 334 aaKnown RBP19.12■□□□□ 0.65
LRRC58-201ENST00000295628 ZNF830Q96NB3 372 aaPredicted RBP19.12■□□□□ 0.65
LRRC58-201ENST00000295628 MIS18AQ9NYP9 233 aa19.12■□□□□ 0.65
LRRC58-201ENST00000295628 PLCB3Q01970 1234 aa19.12■□□□□ 0.65
LRRC58-201ENST00000295628 CCDC114Q96M63 670 aa19.12■□□□□ 0.65
LRRC58-201ENST00000295628 C11orf95C9JLR9 678 aaPredicted RBP19.12■□□□□ 0.65
LRRC58-201ENST00000295628 TTC14Q96N46 770 aa19.12■□□□□ 0.65
LRRC58-201ENST00000295628 CTAGE9A4FU28 777 aa19.12■□□□□ 0.65
LRRC58-201ENST00000295628 TBCAO75347 108 aaKnown RBP19.12■□□□□ 0.65
LRRC58-201ENST00000295628 ERCC5P28715 1186 aaPredicted RBP19.12■□□□□ 0.65
LRRC58-201ENST00000295628 SIRT1Q96EB6 747 aa19.12■□□□□ 0.65
LRRC58-201ENST00000295628 MAP3K12Q12852 859 aa19.11■□□□□ 0.65
LRRC58-201ENST00000295628 UAP1Q16222 522 aaPredicted RBP19.11■□□□□ 0.65
LRRC58-201ENST00000295628 CCDC77Q9BR77 488 aa19.11■□□□□ 0.65
LRRC58-201ENST00000295628 N4BP3O15049 544 aa19.11■□□□□ 0.65
LRRC58-201ENST00000295628 TTF1Q15361 905 aaPredicted RBP19.11■□□□□ 0.65
LRRC58-201ENST00000295628 ZNF652Q9Y2D9 606 aa19.11■□□□□ 0.65
LRRC58-201ENST00000295628 RAB11FIP3O75154 756 aa19.11■□□□□ 0.65
LRRC58-201ENST00000295628 NBPF1Q3BBV0 1214 aa19.11■□□□□ 0.65
LRRC58-201ENST00000295628 ATP2A1O14983 1001 aa19.11■□□□□ 0.65
LRRC58-201ENST00000295628 CIB2O75838 187 aa19.11■□□□□ 0.65
LRRC58-201ENST00000295628 GJB2P29033 226 aa19.11■□□□□ 0.65
LRRC58-201ENST00000295628 AFMP43652 599 aa19.11■□□□□ 0.65
LRRC58-201ENST00000295628 CCDC171Q6TFL3 1326 aa19.11■□□□□ 0.65
LRRC58-201ENST00000295628 AKR1B10O60218 316 aa19.1■□□□□ 0.65
LRRC58-201ENST00000295628 STARD3NLO95772 234 aa19.1■□□□□ 0.65
LRRC58-201ENST00000295628 HMGB1P09429 215 aaKnown RBP19.1■□□□□ 0.65
LRRC58-201ENST00000295628 ATP11AP98196 1134 aa19.1■□□□□ 0.65
LRRC58-201ENST00000295628 RAB11FIP4Q86YS3 637 aa19.1■□□□□ 0.65
LRRC58-201ENST00000295628 IFT81Q8WYA0 676 aa19.1■□□□□ 0.65
LRRC58-201ENST00000295628 VPS52Q8N1B4 723 aa19.1■□□□□ 0.65
LRRC58-201ENST00000295628 PROCA1Q8NCQ7 364 aaPredicted RBP19.1■□□□□ 0.65
LRRC58-201ENST00000295628 HAUS7Q99871 368 aa19.1■□□□□ 0.65
LRRC58-201ENST00000295628 UBA7P41226 1012 aa19.1■□□□□ 0.65
LRRC58-201ENST00000295628 PSMD6Q15008 389 aa19.1■□□□□ 0.65
LRRC58-201ENST00000295628 MAK16Q9BXY0 300 aaKnown RBP19.1■□□□□ 0.65
LRRC58-201ENST00000295628 SSFA2P28290 1259 aa19.09■□□□□ 0.65
LRRC58-201ENST00000295628 FAM169AQ9Y6X4 670 aa19.09■□□□□ 0.65
LRRC58-201ENST00000295628 RPGRQ92834 1020 aaKnown RBP19.09■□□□□ 0.65
LRRC58-201ENST00000295628 KIF1BPQ96EK5 621 aa19.09■□□□□ 0.65
LRRC58-201ENST00000295628 TACC1O75410 805 aa19.09■□□□□ 0.65
LRRC58-201ENST00000295628 SH2B1Q9NRF2 756 aaPredicted RBP19.09■□□□□ 0.65
LRRC58-201ENST00000295628 STAT6P42226 847 aa19.09■□□□□ 0.65
LRRC58-201ENST00000295628 ATP2B3Q16720 1220 aa19.09■□□□□ 0.65
LRRC58-201ENST00000295628 TMEM67Q5HYA8 995 aa19.09■□□□□ 0.65
LRRC58-201ENST00000295628 CCDC14Q49A88 953 aa19.09■□□□□ 0.65
LRRC58-201ENST00000295628 TMEM57Q8N5G2 664 aa19.09■□□□□ 0.65
LRRC58-201ENST00000295628 PLEKHH1Q9ULM0 1364 aa19.09■□□□□ 0.65
LRRC58-201ENST00000295628 RSPH3Q86UC2 560 aa19.09■□□□□ 0.65
LRRC58-201ENST00000295628 AKNAD1Q5T1N1 836 aa19.08■□□□□ 0.65
LRRC58-201ENST00000295628 GBP6Q6ZN66 633 aa19.08■□□□□ 0.65
LRRC58-201ENST00000295628 CTAGE15A4D2H0 777 aa19.08■□□□□ 0.65
LRRC58-201ENST00000295628 CTAGE8P0CG41 777 aa19.08■□□□□ 0.65
LRRC58-201ENST00000295628 MX1P20591 662 aa19.08■□□□□ 0.65
LRRC58-201ENST00000295628 RASA3Q14644 834 aa19.08■□□□□ 0.65
LRRC58-201ENST00000295628 CTAGE6Q86UF2 777 aa19.08■□□□□ 0.65
LRRC58-201ENST00000295628 CTAGE4Q8IX94 777 aa19.08■□□□□ 0.65
LRRC58-201ENST00000295628 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms