RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 BRWD3Q6RI45 1802 aa11.23□□□□□ -0.61
PDPN-201ENST00000294489 GIGYF2Q6Y7W6 1299 aaKnown RBP11.23□□□□□ -0.61
PDPN-201ENST00000294489 ERC1Q8IUD2 1116 aa11.23□□□□□ -0.61
PDPN-201ENST00000294489 COPRSQ9NQ92 184 aa11.23□□□□□ -0.61
PDPN-201ENST00000294489 A0A087WZG4 1122 aa11.22□□□□□ -0.61
PDPN-201ENST00000294489 LOC102724428A0A0B4J2F2 783 aa11.22□□□□□ -0.61
PDPN-201ENST00000294489 ATP5J2-PTCD1G3V325 749 aa11.22□□□□□ -0.61
PDPN-201ENST00000294489 EIF5P55010 431 aaKnown RBP11.22□□□□□ -0.61
PDPN-201ENST00000294489 SIK1P57059 783 aa11.22□□□□□ -0.61
PDPN-201ENST00000294489 PLA2G12BQ9BX93 195 aa11.22□□□□□ -0.61
PDPN-201ENST00000294489 KAT6BQ8WYB5 2073 aa11.22□□□□□ -0.61
PDPN-201ENST00000294489 KIF6Q6ZMV9 814 aa11.22□□□□□ -0.61
PDPN-201ENST00000294489 HSCBQ8IWL3 235 aa11.22□□□□□ -0.61
PDPN-201ENST00000294489 ACSBG1Q96GR2 724 aa11.22□□□□□ -0.61
PDPN-201ENST00000294489 ZBTB1Q9Y2K1 713 aa11.22□□□□□ -0.61
PDPN-201ENST00000294489 ITPK1Q13572 414 aa11.22□□□□□ -0.61
PDPN-201ENST00000294489 SYTL4Q96C24 671 aaPredicted RBP11.22□□□□□ -0.61
PDPN-201ENST00000294489 DDX60Q8IY21 1712 aaKnown RBP11.21□□□□□ -0.61
PDPN-201ENST00000294489 KCNQ2O43526 872 aa11.21□□□□□ -0.61
PDPN-201ENST00000294489 UBE3BQ7Z3V4 1068 aa11.21□□□□□ -0.61
PDPN-201ENST00000294489 ZBTB3Q9H5J0 574 aa11.21□□□□□ -0.61
PDPN-201ENST00000294489 CDHR2Q9BYE9 1310 aa11.21□□□□□ -0.62
PDPN-201ENST00000294489 RGL2O15211 777 aa11.21□□□□□ -0.62
PDPN-201ENST00000294489 CCDC87Q9NVE4 849 aa11.21□□□□□ -0.62
PDPN-201ENST00000294489 TRPC5Q9UL62 973 aaPredicted RBP11.21□□□□□ -0.62
PDPN-201ENST00000294489 CASZ1Q86V15 1759 aa11.21□□□□□ -0.62
PDPN-201ENST00000294489 PCCAP05165 728 aaPredicted RBP11.2□□□□□ -0.62
PDPN-201ENST00000294489 OS9Q13438 667 aaPredicted RBP11.2□□□□□ -0.62
PDPN-201ENST00000294489 HSP90AB3PQ58FF7 597 aa11.2□□□□□ -0.62
PDPN-201ENST00000294489 SASH1O94885 1247 aa11.2□□□□□ -0.62
PDPN-201ENST00000294489 REC8O95072 547 aa11.2□□□□□ -0.62
PDPN-201ENST00000294489 PTPN12Q05209 780 aaKnown RBP11.2□□□□□ -0.62
PDPN-201ENST00000294489 PI4K2BQ8TCG2 481 aa11.2□□□□□ -0.62
PDPN-201ENST00000294489 IL1RAPL2Q9NP60 686 aa11.2□□□□□ -0.62
PDPN-201ENST00000294489 LRP5O75197 1615 aa11.2□□□□□ -0.62
PDPN-201ENST00000294489 COL24A1Q17RW2 1714 aa11.2□□□□□ -0.62
PDPN-201ENST00000294489 TTC41PQ6P2S7 1318 aa11.2□□□□□ -0.62
PDPN-201ENST00000294489 ATP6V1AP38606 617 aa11.2□□□□□ -0.62
PDPN-201ENST00000294489 CRKLP46109 303 aaKnown RBP11.2□□□□□ -0.62
PDPN-201ENST00000294489 HLFQ16534 295 aa11.19□□□□□ -0.62
PDPN-201ENST00000294489 MEX3CQ5U5Q3 659 aaKnown RBP11.19□□□□□ -0.62
PDPN-201ENST00000294489 ZNF34Q8IZ26 560 aa11.19□□□□□ -0.62
PDPN-201ENST00000294489 SNX21Q969T3 373 aa11.19□□□□□ -0.62
PDPN-201ENST00000294489 SLKQ9H2G2 1235 aaPredicted RBP11.19□□□□□ -0.62
PDPN-201ENST00000294489 PA2G4Q9UQ80 394 aaKnown RBP11.19□□□□□ -0.62
PDPN-201ENST00000294489 CNTNAP4Q9C0A0 1308 aa11.19□□□□□ -0.62
PDPN-201ENST00000294489 ZBTB38Q8NAP3 1195 aaPredicted RBP11.19□□□□□ -0.62
PDPN-201ENST00000294489 TRIM6-TRIM34B2RNG4 842 aa11.18□□□□□ -0.62
PDPN-201ENST00000294489 NFKBIBQ15653 356 aa11.18□□□□□ -0.62
PDPN-201ENST00000294489 TSHZ3Q63HK5 1081 aa11.18□□□□□ -0.62
PDPN-201ENST00000294489 NLRP10Q86W26 655 aa11.18□□□□□ -0.62
PDPN-201ENST00000294489 ERC2O15083 957 aa11.18□□□□□ -0.62
PDPN-201ENST00000294489 CSF1RP07333 972 aa11.18□□□□□ -0.62
PDPN-201ENST00000294489 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
PDPN-201ENST00000294489 C4BP0C0L5 1744 aa11.18□□□□□ -0.62
PDPN-201ENST00000294489 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
PDPN-201ENST00000294489 CLASRPQ8N2M8 674 aaKnown RBP11.18□□□□□ -0.62
PDPN-201ENST00000294489 USP26Q9BXU7 913 aa11.18□□□□□ -0.62
PDPN-201ENST00000294489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.18□□□□□ -0.62
PDPN-201ENST00000294489 CAMTA2O94983 1202 aa11.17□□□□□ -0.62
PDPN-201ENST00000294489 G3BP1Q13283 466 aaKnown RBP eCLIP11.17□□□□□ -0.62
PDPN-201ENST00000294489 DZIP3Q86Y13 1208 aaKnown RBP11.17□□□□□ -0.62
PDPN-201ENST00000294489 NUTM1Q86Y26 1132 aa11.17□□□□□ -0.62
PDPN-201ENST00000294489 RILPL2Q969X0 211 aa11.17□□□□□ -0.62
PDPN-201ENST00000294489 LMBR1LQ6UX01 489 aa11.17□□□□□ -0.62
PDPN-201ENST00000294489 LINC00116Q8NCU8 138 aa11.17□□□□□ -0.62
PDPN-201ENST00000294489 JARID2Q92833 1246 aaPredicted RBP11.17□□□□□ -0.62
PDPN-201ENST00000294489 KIF2CQ99661 725 aa11.17□□□□□ -0.62
PDPN-201ENST00000294489 FBXO3Q9UK99 471 aa11.17□□□□□ -0.62
PDPN-201ENST00000294489 CIAO1O76071 339 aa11.16□□□□□ -0.62
PDPN-201ENST00000294489 AK7Q96M32 723 aa11.16□□□□□ -0.62
PDPN-201ENST00000294489 ARAP2Q8WZ64 1704 aa11.16□□□□□ -0.62
PDPN-201ENST00000294489 PTF1AQ7RTS3 328 aa11.16□□□□□ -0.62
PDPN-201ENST00000294489 ANTXR1Q9H6X2 564 aa11.16□□□□□ -0.62
PDPN-201ENST00000294489 UBN2Q6ZU65 1347 aa11.16□□□□□ -0.62
PDPN-201ENST00000294489 RABEP1Q15276 862 aa11.15□□□□□ -0.62
PDPN-201ENST00000294489 ATG9AQ7Z3C6 839 aa11.15□□□□□ -0.62
PDPN-201ENST00000294489 GPR108Q9NPR9 543 aa11.15□□□□□ -0.62
PDPN-201ENST00000294489 SPEF2Q9C093 1822 aa11.15□□□□□ -0.62
PDPN-201ENST00000294489 SEPT12Q8IYM1 358 aa11.15□□□□□ -0.62
PDPN-201ENST00000294489 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
PDPN-201ENST00000294489 EAF2Q96CJ1 260 aaPredicted RBP11.15□□□□□ -0.62
PDPN-201ENST00000294489 GPATCH3Q96I76 525 aa11.15□□□□□ -0.62
PDPN-201ENST00000294489 UBR3Q6ZT12 1888 aa11.15□□□□□ -0.62
PDPN-201ENST00000294489 A0A1B0GUL6 1792 aa11.14□□□□□ -0.63
PDPN-201ENST00000294489 GLRX3O76003 335 aaKnown RBP11.14□□□□□ -0.63
PDPN-201ENST00000294489 IFIT2P09913 472 aaKnown RBP11.14□□□□□ -0.63
PDPN-201ENST00000294489 KLHDC4Q8TBB5 520 aa11.14□□□□□ -0.63
PDPN-201ENST00000294489 IL17RAQ96F46 866 aa11.14□□□□□ -0.63
PDPN-201ENST00000294489 QTRT2Q9H974 415 aaKnown RBP11.14□□□□□ -0.63
PDPN-201ENST00000294489 ECHDC1Q9NTX5 307 aa11.14□□□□□ -0.63
PDPN-201ENST00000294489 EPB41L2O43491 1005 aaKnown RBP11.14□□□□□ -0.63
PDPN-201ENST00000294489 CHMLP26374 656 aa11.14□□□□□ -0.63
PDPN-201ENST00000294489 CLEC4GQ6UXB4 293 aa11.14□□□□□ -0.63
PDPN-201ENST00000294489 CNTROBQ8N137 903 aa11.14□□□□□ -0.63
PDPN-201ENST00000294489 ESYT1Q9BSJ8 1104 aa11.14□□□□□ -0.63
PDPN-201ENST00000294489 BCL11BQ9C0K0 894 aaPredicted RBP11.13□□□□□ -0.63
PDPN-201ENST00000294489 TBC1D2BQ9UPU7 963 aa11.13□□□□□ -0.63
PDPN-201ENST00000294489 ZNF609O15014 1411 aa11.13□□□□□ -0.63
PDPN-201ENST00000294489 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms