RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 ASAP1Q9ULH1 1129 aa16.93■□□□□ 0.3
NXF1-201ENST00000294172 SNX14Q9Y5W7 946 aa16.93■□□□□ 0.3
NXF1-201ENST00000294172 BAG4O95429 457 aaKnown RBP16.92■□□□□ 0.3
NXF1-201ENST00000294172 GOLGA6L22H0YM25 854 aa16.92■□□□□ 0.3
NXF1-201ENST00000294172 H7C1W4 665 aa16.92■□□□□ 0.3
NXF1-201ENST00000294172 RASEFQ8IZ41 740 aa16.92■□□□□ 0.3
NXF1-201ENST00000294172 PIGBQ92521 554 aa16.92■□□□□ 0.3
NXF1-201ENST00000294172 IL17RAQ96F46 866 aa16.92■□□□□ 0.3
NXF1-201ENST00000294172 PTH1RQ03431 593 aa16.91■□□□□ 0.3
NXF1-201ENST00000294172 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
NXF1-201ENST00000294172 FSD1Q9BTV5 496 aa16.91■□□□□ 0.3
NXF1-201ENST00000294172 FOXO4P98177 505 aa16.91■□□□□ 0.3
NXF1-201ENST00000294172 TNNI3KQ59H18 835 aa16.91■□□□□ 0.3
NXF1-201ENST00000294172 DBNLQ9UJU6 430 aaKnown RBP16.91■□□□□ 0.3
NXF1-201ENST00000294172 FPGT-TNNI3KV9GXZ4 949 aa16.91■□□□□ 0.3
NXF1-201ENST00000294172 SHANK3Q9BYB0 1731 aa16.91■□□□□ 0.3
NXF1-201ENST00000294172 TNS2Q63HR2 1409 aa16.9■□□□□ 0.3
NXF1-201ENST00000294172 UBR2Q8IWV8 1755 aa16.9■□□□□ 0.3
NXF1-201ENST00000294172 CYP2E1P05181 493 aaPredicted RBP16.9■□□□□ 0.3
NXF1-201ENST00000294172 NMIQ13287 307 aaPredicted RBP16.9■□□□□ 0.3
NXF1-201ENST00000294172 COL15A1P39059 1388 aa16.9■□□□□ 0.3
NXF1-201ENST00000294172 FOXD4L5Q5VV16 416 aaPredicted RBP16.9■□□□□ 0.3
NXF1-201ENST00000294172 MCTP1Q6DN14 999 aa16.9■□□□□ 0.3
NXF1-201ENST00000294172 CLEC17AQ6ZS10 378 aa16.9■□□□□ 0.3
NXF1-201ENST00000294172 DNAJC10Q8IXB1 793 aa16.9■□□□□ 0.3
NXF1-201ENST00000294172 FOXD4L4Q8WXT5 416 aaPredicted RBP16.9■□□□□ 0.3
NXF1-201ENST00000294172 CCDC9Q9Y3X0 531 aaKnown RBP16.9■□□□□ 0.3
NXF1-201ENST00000294172 HIP1O00291 1037 aa16.89■□□□□ 0.29
NXF1-201ENST00000294172 PTMSP20962 102 aa16.89■□□□□ 0.29
NXF1-201ENST00000294172 PRPF40BQ6NWY9 871 aaKnown RBP16.89■□□□□ 0.29
NXF1-201ENST00000294172 CCDC191Q8NCU4 936 aa16.89■□□□□ 0.29
NXF1-201ENST00000294172 EDC3Q96F86 508 aaKnown RBP16.89■□□□□ 0.29
NXF1-201ENST00000294172 GOLGA6L3A6NEY3 463 aa16.88■□□□□ 0.29
NXF1-201ENST00000294172 CUL4AQ13619 759 aa16.88■□□□□ 0.29
NXF1-201ENST00000294172 SKOR2Q2VWA4 1001 aaPredicted RBP16.88■□□□□ 0.29
NXF1-201ENST00000294172 ATG3Q9NT62 314 aa16.88■□□□□ 0.29
NXF1-201ENST00000294172 KCNJ4P48050 445 aa16.88■□□□□ 0.29
NXF1-201ENST00000294172 ZDHHC9Q9Y397 364 aa16.88■□□□□ 0.29
NXF1-201ENST00000294172 NDUFB9Q9Y6M9 179 aa16.88■□□□□ 0.29
NXF1-201ENST00000294172 KAT6BQ8WYB5 2073 aa16.88■□□□□ 0.29
NXF1-201ENST00000294172 CPA1P15085 419 aa16.87■□□□□ 0.29
NXF1-201ENST00000294172 L1TD1Q5T7N2 865 aaKnown RBP16.87■□□□□ 0.29
NXF1-201ENST00000294172 SYTL4Q96C24 671 aaPredicted RBP16.87■□□□□ 0.29
NXF1-201ENST00000294172 DBNDD2Q9BQY9 259 aa16.87■□□□□ 0.29
NXF1-201ENST00000294172 LARP6Q9BRS8 491 aaKnown RBP16.87■□□□□ 0.29
NXF1-201ENST00000294172 PAPPAQ13219 1627 aa16.87■□□□□ 0.29
NXF1-201ENST00000294172 CASTP20810 708 aaKnown RBP16.87■□□□□ 0.29
NXF1-201ENST00000294172 TOGARAM1Q9Y4F4 1720 aa16.87■□□□□ 0.29
NXF1-201ENST00000294172 CCDC171Q6TFL3 1326 aa16.87■□□□□ 0.29
NXF1-201ENST00000294172 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
NXF1-201ENST00000294172 STARD3NLO95772 234 aa16.86■□□□□ 0.29
NXF1-201ENST00000294172 ATP5JP18859 108 aa16.86■□□□□ 0.29
NXF1-201ENST00000294172 DNAJC2Q99543 621 aaKnown RBP16.86■□□□□ 0.29
NXF1-201ENST00000294172 KIF6Q6ZMV9 814 aa16.86■□□□□ 0.29
NXF1-201ENST00000294172 INTS4Q96HW7 963 aaKnown RBP16.86■□□□□ 0.29
NXF1-201ENST00000294172 ZNF594Q96JF6 807 aaPredicted RBP16.86■□□□□ 0.29
NXF1-201ENST00000294172 NEUROD6Q96NK8 337 aa16.86■□□□□ 0.29
NXF1-201ENST00000294172 TEX13AQ9BXU3 409 aaPredicted RBP16.86■□□□□ 0.29
NXF1-201ENST00000294172 EXOC5O00471 708 aa16.85■□□□□ 0.29
NXF1-201ENST00000294172 AK2P54819 239 aa16.85■□□□□ 0.29
NXF1-201ENST00000294172 JAKMIP1Q96N16 626 aaKnown RBP16.85■□□□□ 0.29
NXF1-201ENST00000294172 RBM8AQ9Y5S9 174 aaKnown RBP16.85■□□□□ 0.29
NXF1-201ENST00000294172 TCIRG1Q13488 830 aa16.85■□□□□ 0.29
NXF1-201ENST00000294172 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
NXF1-201ENST00000294172 VSIG10Q8N0Z9 540 aa16.85■□□□□ 0.29
NXF1-201ENST00000294172 TTC14Q96N46 770 aa16.85■□□□□ 0.29
NXF1-201ENST00000294172 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
NXF1-201ENST00000294172 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
NXF1-201ENST00000294172 ATG9AQ7Z3C6 839 aa16.84■□□□□ 0.29
NXF1-201ENST00000294172 CHAMP1Q96JM3 812 aa16.84■□□□□ 0.29
NXF1-201ENST00000294172 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
NXF1-201ENST00000294172 ADAMTS2O95450 1211 aa16.84■□□□□ 0.29
NXF1-201ENST00000294172 NECTIN1Q15223 517 aa16.84■□□□□ 0.29
NXF1-201ENST00000294172 ISCA1Q9BUE6 129 aa16.84■□□□□ 0.29
NXF1-201ENST00000294172 FSD2A1L4K1 749 aa16.83■□□□□ 0.28
NXF1-201ENST00000294172 TIMM10P62072 90 aa16.83■□□□□ 0.28
NXF1-201ENST00000294172 LRRC24Q50LG9 513 aa16.83■□□□□ 0.28
NXF1-201ENST00000294172 CREB3L3Q68CJ9 461 aa16.83■□□□□ 0.28
NXF1-201ENST00000294172 MAP4K1Q92918 833 aa16.83■□□□□ 0.28
NXF1-201ENST00000294172 CCDC85AQ96PX6 553 aaPredicted RBP16.83■□□□□ 0.28
NXF1-201ENST00000294172 RUFY3Q7L099 469 aa16.82■□□□□ 0.28
NXF1-201ENST00000294172 ZNF589Q86UQ0 364 aaPredicted RBP16.82■□□□□ 0.28
NXF1-201ENST00000294172 FAM89AQ96GI7 184 aa16.82■□□□□ 0.28
NXF1-201ENST00000294172 LIMCH1Q9UPQ0 1083 aa16.82■□□□□ 0.28
NXF1-201ENST00000294172 ROBO1Q9Y6N7 1651 aa16.82■□□□□ 0.28
NXF1-201ENST00000294172 A0A0G2JS52 829 aa16.82■□□□□ 0.28
NXF1-201ENST00000294172 NCLP19338 710 aaKnown RBP16.82■□□□□ 0.28
NXF1-201ENST00000294172 IL15P40933 162 aaPredicted RBP16.82■□□□□ 0.28
NXF1-201ENST00000294172 DDX46Q7L014 1031 aaKnown RBP16.82■□□□□ 0.28
NXF1-201ENST00000294172 PDRG1Q9NUG6 133 aa16.82■□□□□ 0.28
NXF1-201ENST00000294172 CYP46A1Q9Y6A2 500 aa16.82■□□□□ 0.28
NXF1-201ENST00000294172 DISP2A7MBM2 1401 aa16.82■□□□□ 0.28
NXF1-201ENST00000294172 EYA2O00167 538 aa16.81■□□□□ 0.28
NXF1-201ENST00000294172 PRPF40AO75400 957 aaKnown RBP16.81■□□□□ 0.28
NXF1-201ENST00000294172 COL14A1Q05707 1796 aaKnown RBP16.81■□□□□ 0.28
NXF1-201ENST00000294172 BRD1O95696 1058 aa16.81■□□□□ 0.28
NXF1-201ENST00000294172 CHGBP05060 677 aa16.81■□□□□ 0.28
NXF1-201ENST00000294172 XRCC6P12956 609 aaKnown RBP eCLIP16.81■□□□□ 0.28
NXF1-201ENST00000294172 GPTP24298 496 aa16.81■□□□□ 0.28
NXF1-201ENST00000294172 CCDC57Q2TAC2 916 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms