RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 INTS4Q96HW7 963 aaKnown RBP19.03■□□□□ 0.64
NCKIPSD-201ENST00000294129 TMEM63CQ9P1W3 806 aa19.02■□□□□ 0.64
NCKIPSD-201ENST00000294129 PRIM1P49642 420 aaKnown RBP19.02■□□□□ 0.64
NCKIPSD-201ENST00000294129 CCDC83Q8IWF9 413 aa19.02■□□□□ 0.64
NCKIPSD-201ENST00000294129 A0A0D9SFI3 127 aa19.02■□□□□ 0.63
NCKIPSD-201ENST00000294129 COL9A3Q14050 684 aaPredicted RBP19.02■□□□□ 0.63
NCKIPSD-201ENST00000294129 SPATA31A3Q5VYP0 1347 aa19.02■□□□□ 0.63
NCKIPSD-201ENST00000294129 TNS3Q68CZ2 1445 aa19.02■□□□□ 0.63
NCKIPSD-201ENST00000294129 SCN11AQ9UI33 1791 aa19.01■□□□□ 0.63
NCKIPSD-201ENST00000294129 CAMTA1Q9Y6Y1 1673 aa19.01■□□□□ 0.63
NCKIPSD-201ENST00000294129 UTYO14607 1347 aa19.01■□□□□ 0.63
NCKIPSD-201ENST00000294129 LIMCH1Q9UPQ0 1083 aa19.01■□□□□ 0.63
NCKIPSD-201ENST00000294129 RBM8AQ9Y5S9 174 aaKnown RBP19.01■□□□□ 0.63
NCKIPSD-201ENST00000294129 CHGBP05060 677 aa19.01■□□□□ 0.63
NCKIPSD-201ENST00000294129 TFCP2Q12800 502 aa19.01■□□□□ 0.63
NCKIPSD-201ENST00000294129 TTC14Q96N46 770 aa19.01■□□□□ 0.63
NCKIPSD-201ENST00000294129 STRCP1A6NGW2 1772 aa19.01■□□□□ 0.63
NCKIPSD-201ENST00000294129 ANP32BQ92688 251 aaKnown RBP19■□□□□ 0.63
NCKIPSD-201ENST00000294129 DNAJC2Q99543 621 aaKnown RBP19■□□□□ 0.63
NCKIPSD-201ENST00000294129 PDRG1Q9NUG6 133 aa19■□□□□ 0.63
NCKIPSD-201ENST00000294129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19■□□□□ 0.63
NCKIPSD-201ENST00000294129 CCDC171Q6TFL3 1326 aa19■□□□□ 0.63
NCKIPSD-201ENST00000294129 KAT6BQ8WYB5 2073 aa19■□□□□ 0.63
NCKIPSD-201ENST00000294129 TCHHQ07283 1943 aa19■□□□□ 0.63
NCKIPSD-201ENST00000294129 NECAB1Q8N987 351 aa18.99■□□□□ 0.63
NCKIPSD-201ENST00000294129 ZBTB3Q9H5J0 574 aa18.99■□□□□ 0.63
NCKIPSD-201ENST00000294129 SMC3Q9UQE7 1217 aa18.99■□□□□ 0.63
NCKIPSD-201ENST00000294129 GADD45BO75293 160 aaPredicted RBP18.99■□□□□ 0.63
NCKIPSD-201ENST00000294129 A1BGP04217 495 aa18.99■□□□□ 0.63
NCKIPSD-201ENST00000294129 RBSNQ9H1K0 784 aa18.99■□□□□ 0.63
NCKIPSD-201ENST00000294129 ZKSCAN1P17029 563 aaPredicted RBP18.99■□□□□ 0.63
NCKIPSD-201ENST00000294129 TTLL7Q6ZT98 887 aa18.99■□□□□ 0.63
NCKIPSD-201ENST00000294129 BRINP3Q76B58 766 aa18.99■□□□□ 0.63
NCKIPSD-201ENST00000294129 LRP10Q7Z4F1 713 aa18.99■□□□□ 0.63
NCKIPSD-201ENST00000294129 RNF214Q8ND24 703 aa18.99■□□□□ 0.63
NCKIPSD-201ENST00000294129 WDR33Q9C0J8 1336 aaKnown RBP18.98■□□□□ 0.63
NCKIPSD-201ENST00000294129 CYP46A1Q9Y6A2 500 aa18.98■□□□□ 0.63
NCKIPSD-201ENST00000294129 CREB3L3Q68CJ9 461 aa18.98■□□□□ 0.63
NCKIPSD-201ENST00000294129 LMBR1LQ6UX01 489 aa18.98■□□□□ 0.63
NCKIPSD-201ENST00000294129 TAF6LQ9Y6J9 622 aa18.98■□□□□ 0.63
NCKIPSD-201ENST00000294129 ERBB4Q15303 1308 aa18.97■□□□□ 0.63
NCKIPSD-201ENST00000294129 ZNF445P59923 1031 aa18.97■□□□□ 0.63
NCKIPSD-201ENST00000294129 PTPN12Q05209 780 aaKnown RBP18.97■□□□□ 0.63
NCKIPSD-201ENST00000294129 ZNF589Q86UQ0 364 aaPredicted RBP18.97■□□□□ 0.63
NCKIPSD-201ENST00000294129 DBNLQ9UJU6 430 aaKnown RBP18.97■□□□□ 0.63
NCKIPSD-201ENST00000294129 ZCRB1Q8TBF4 217 aaKnown RBP18.97■□□□□ 0.63
NCKIPSD-201ENST00000294129 NBPF26B4DH59 902 aa18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 NBPF14Q5TI25 921 aa18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 NBPF10Q6P3W6 841 aaKnown RBP18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 NBPF15Q8N660 670 aa18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 EPB41L2O43491 1005 aaKnown RBP18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 USP48Q86UV5 1035 aa18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 DBNDD2Q9BQY9 259 aa18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 CNPY2Q9Y2B0 182 aa18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 RPAP1Q9BWH6 1393 aaPredicted RBP18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 SYT1P21579 422 aa18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 TNNI3KQ59H18 835 aa18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 NEUROD6Q96NK8 337 aa18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 FPGT-TNNI3KV9GXZ4 949 aa18.96■□□□□ 0.63
NCKIPSD-201ENST00000294129 NECTIN1Q15223 517 aa18.95■□□□□ 0.62
NCKIPSD-201ENST00000294129 CCDC129Q6ZRS4 1044 aa18.95■□□□□ 0.62
NCKIPSD-201ENST00000294129 IL17RAQ96F46 866 aa18.95■□□□□ 0.62
NCKIPSD-201ENST00000294129 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.95■□□□□ 0.62
NCKIPSD-201ENST00000294129 COL18A1P39060 1754 aa18.95■□□□□ 0.62
NCKIPSD-201ENST00000294129 VPS37CA5D8V6 355 aaPredicted RBP18.95■□□□□ 0.62
NCKIPSD-201ENST00000294129 FIBPO43427 364 aa18.95■□□□□ 0.62
NCKIPSD-201ENST00000294129 DDX46Q7L014 1031 aaKnown RBP18.95■□□□□ 0.62
NCKIPSD-201ENST00000294129 ESPNB1AK53 854 aa18.94■□□□□ 0.62
NCKIPSD-201ENST00000294129 STX6O43752 255 aa18.94■□□□□ 0.62
NCKIPSD-201ENST00000294129 GJB2P29033 226 aa18.94■□□□□ 0.62
NCKIPSD-201ENST00000294129 CCDC85AQ96PX6 553 aaPredicted RBP18.94■□□□□ 0.62
NCKIPSD-201ENST00000294129 ADAMTS7Q9UKP4 1686 aa18.94■□□□□ 0.62
NCKIPSD-201ENST00000294129 SLC27A2O14975 620 aa18.94■□□□□ 0.62
NCKIPSD-201ENST00000294129 PLBD2Q8NHP8 589 aa18.94■□□□□ 0.62
NCKIPSD-201ENST00000294129 SEC62Q99442 399 aaKnown RBP18.94■□□□□ 0.62
NCKIPSD-201ENST00000294129 EVA1CP58658 441 aa18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 STK3Q13188 491 aa18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 SLFNL1Q499Z3 407 aa18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 COPRSQ9NQ92 184 aa18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 MBD3O95983 291 aa18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 RFX5P48382 616 aaPredicted RBP18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 ME3Q16798 604 aa18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 AFDNP55196 1824 aaKnown RBP18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 HIP1O00291 1037 aa18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 ZNF594Q96JF6 807 aaPredicted RBP18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 NAP1L5Q96NT1 182 aaPredicted RBP18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 ZSWIM6Q9HCJ5 1215 aa18.93■□□□□ 0.62
NCKIPSD-201ENST00000294129 ZSCAN22P10073 491 aaPredicted RBP18.92■□□□□ 0.62
NCKIPSD-201ENST00000294129 VPS53Q5VIR6 699 aa18.92■□□□□ 0.62
NCKIPSD-201ENST00000294129 MAP4K1Q92918 833 aa18.92■□□□□ 0.62
NCKIPSD-201ENST00000294129 CCDC173Q0VFZ6 552 aa18.92■□□□□ 0.62
NCKIPSD-201ENST00000294129 TPCN1Q9ULQ1 816 aa18.92■□□□□ 0.62
NCKIPSD-201ENST00000294129 WDR17Q8IZU2 1322 aa18.92■□□□□ 0.62
NCKIPSD-201ENST00000294129 PCDH11XQ9BZA7 1347 aa18.91■□□□□ 0.62
NCKIPSD-201ENST00000294129 PCDH11YQ9BZA8 1340 aa18.91■□□□□ 0.62
NCKIPSD-201ENST00000294129 TIMM10P62072 90 aa18.91■□□□□ 0.62
NCKIPSD-201ENST00000294129 CRYBG1Q9Y4K1 1723 aa18.9■□□□□ 0.62
NCKIPSD-201ENST00000294129 DCCP43146 1447 aa18.9■□□□□ 0.62
NCKIPSD-201ENST00000294129 BLOC1S2Q6QNY1 142 aa18.9■□□□□ 0.62
NCKIPSD-201ENST00000294129 LRSAM1Q6UWE0 723 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms