RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 DIEXFQ68CQ4 756 aaKnown RBP26.39■■□□□ 1.82
RAB28-201ENST00000288723 SYNE4Q8N205 404 aa26.39■■□□□ 1.82
RAB28-201ENST00000288723 ZNF526Q8TF50 670 aaPredicted RBP26.39■■□□□ 1.82
RAB28-201ENST00000288723 EXOSC9Q06265 439 aaKnown RBP26.39■■□□□ 1.81
RAB28-201ENST00000288723 RIC3Q7Z5B4 369 aa26.39■■□□□ 1.81
RAB28-201ENST00000288723 GOLGA2Q08379 1002 aa26.38■■□□□ 1.81
RAB28-201ENST00000288723 C3orf67Q6ZVT6 689 aa26.38■■□□□ 1.81
RAB28-201ENST00000288723 SLX4Q8IY92 1834 aa26.38■■□□□ 1.81
RAB28-201ENST00000288723 CHMP4AQ9BY43 222 aa26.37■■□□□ 1.81
RAB28-201ENST00000288723 ANKRD36CQ5JPF3 1778 aa26.37■■□□□ 1.81
RAB28-201ENST00000288723 TRMT112Q9UI30 125 aaKnown RBP26.37■■□□□ 1.81
RAB28-201ENST00000288723 ZNF521Q96K83 1311 aa26.36■■□□□ 1.81
RAB28-201ENST00000288723 CRY2Q49AN0 593 aa26.36■■□□□ 1.81
RAB28-201ENST00000288723 ISCA1Q9BUE6 129 aa26.36■■□□□ 1.81
RAB28-201ENST00000288723 STK31Q9BXU1 1019 aa26.36■■□□□ 1.81
RAB28-201ENST00000288723 RNF181Q9P0P0 153 aa26.36■■□□□ 1.81
RAB28-201ENST00000288723 CACNA1SQ13698 1873 aa26.36■■□□□ 1.81
RAB28-201ENST00000288723 NFKBIEO00221 500 aa26.35■■□□□ 1.81
RAB28-201ENST00000288723 PRELPP51888 382 aa26.35■■□□□ 1.81
RAB28-201ENST00000288723 HCLS1P14317 486 aaPredicted RBP26.35■■□□□ 1.81
RAB28-201ENST00000288723 MIER1Q8N108 512 aa26.35■■□□□ 1.81
RAB28-201ENST00000288723 VAMP4O75379 141 aa26.34■■□□□ 1.81
RAB28-201ENST00000288723 SLC4A2P04920 1241 aa26.34■■□□□ 1.81
RAB28-201ENST00000288723 OLFM4Q6UX06 510 aa26.34■■□□□ 1.81
RAB28-201ENST00000288723 G2E3Q7L622 706 aa26.34■■□□□ 1.81
RAB28-201ENST00000288723 MYH16Q9H6N6 1097 aa26.34■■□□□ 1.81
RAB28-201ENST00000288723 SLC10A5Q5PT55 438 aa26.33■■□□□ 1.81
RAB28-201ENST00000288723 C7orf43Q8WVR3 580 aa26.33■■□□□ 1.81
RAB28-201ENST00000288723 RPGRQ92834 1020 aaKnown RBP26.33■■□□□ 1.81
RAB28-201ENST00000288723 NLRP3Q96P20 1036 aa26.32■■□□□ 1.8
RAB28-201ENST00000288723 MYD88Q99836 296 aa26.32■■□□□ 1.8
RAB28-201ENST00000288723 RIC1Q4ADV7 1423 aa26.32■■□□□ 1.8
RAB28-201ENST00000288723 ARFGEF2Q9Y6D5 1785 aa26.32■■□□□ 1.8
RAB28-201ENST00000288723 SH3TC1Q8TE82 1336 aa26.32■■□□□ 1.8
RAB28-201ENST00000288723 ALDH1B1P30837 517 aa26.32■■□□□ 1.8
RAB28-201ENST00000288723 RTL5Q5HYW3 569 aaPredicted RBP26.32■■□□□ 1.8
RAB28-201ENST00000288723 FAM89AQ96GI7 184 aa26.31■■□□□ 1.8
RAB28-201ENST00000288723 GPBP1L1Q9HC44 474 aaPredicted RBP26.31■■□□□ 1.8
RAB28-201ENST00000288723 DDX58O95786 925 aaKnown RBP26.3■■□□□ 1.8
RAB28-201ENST00000288723 MAP3K2Q9Y2U5 619 aa26.3■■□□□ 1.8
RAB28-201ENST00000288723 RNF123Q5XPI4 1314 aa26.3■■□□□ 1.8
RAB28-201ENST00000288723 LMNB1P20700 586 aa26.3■■□□□ 1.8
RAB28-201ENST00000288723 SBF1O95248 1867 aa26.3■■□□□ 1.8
RAB28-201ENST00000288723 PI4KAP2A4QPH2 592 aa26.29■■□□□ 1.8
RAB28-201ENST00000288723 HOXA10P31260 410 aaPredicted RBP26.29■■□□□ 1.8
RAB28-201ENST00000288723 PI4KAP1Q8N8J0 262 aa26.29■■□□□ 1.8
RAB28-201ENST00000288723 TRIM28Q13263 835 aaKnown RBP26.28■■□□□ 1.8
RAB28-201ENST00000288723 RBM17Q96I25 401 aaKnown RBP26.28■■□□□ 1.8
RAB28-201ENST00000288723 KSR2Q6VAB6 950 aa26.28■■□□□ 1.8
RAB28-201ENST00000288723 SLC51AQ86UW1 340 aa26.28■■□□□ 1.8
RAB28-201ENST00000288723 METTL22Q9BUU2 404 aaPredicted RBP26.28■■□□□ 1.8
RAB28-201ENST00000288723 SOGA3Q5TF21 947 aa26.27■■□□□ 1.8
RAB28-201ENST00000288723 TAOK3Q9H2K8 898 aa26.27■■□□□ 1.8
RAB28-201ENST00000288723 CCDC93Q567U6 631 aa26.26■■□□□ 1.79
RAB28-201ENST00000288723 JARID2Q92833 1246 aaPredicted RBP26.25■■□□□ 1.79
RAB28-201ENST00000288723 CRAMP1Q96RY5 1269 aa26.25■■□□□ 1.79
RAB28-201ENST00000288723 FER1L6Q2WGJ9 1857 aa26.25■■□□□ 1.79
RAB28-201ENST00000288723 FLIIQ13045 1269 aa26.25■■□□□ 1.79
RAB28-201ENST00000288723 CDCA7LQ96GN5 454 aa26.24■■□□□ 1.79
RAB28-201ENST00000288723 ZBTB38Q8NAP3 1195 aaPredicted RBP26.23■■□□□ 1.79
RAB28-201ENST00000288723 CCDC191Q8NCU4 936 aa26.23■■□□□ 1.79
RAB28-201ENST00000288723 ABCC4O15439 1325 aa26.23■■□□□ 1.79
RAB28-201ENST00000288723 E9PSI1 815 aa26.22■■□□□ 1.79
RAB28-201ENST00000288723 IRS4O14654 1257 aaPredicted RBP26.22■■□□□ 1.79
RAB28-201ENST00000288723 IGKV5-2P06315 115 aa26.22■■□□□ 1.79
RAB28-201ENST00000288723 FKBP5Q13451 457 aaPredicted RBP26.22■■□□□ 1.79
RAB28-201ENST00000288723 CWC25Q9NXE8 425 aaPredicted RBP26.22■■□□□ 1.79
RAB28-201ENST00000288723 CCDC88AQ3V6T2 1871 aa26.22■■□□□ 1.79
RAB28-201ENST00000288723 LTBP3Q9NS15 1303 aa26.22■■□□□ 1.79
RAB28-201ENST00000288723 PPEF1O14829 653 aaPredicted RBP26.21■■□□□ 1.79
RAB28-201ENST00000288723 SLFN5Q08AF3 891 aa26.21■■□□□ 1.79
RAB28-201ENST00000288723 LAMB2P55268 1798 aa26.21■■□□□ 1.79
RAB28-201ENST00000288723 CWF19L2Q2TBE0 894 aaKnown RBP26.21■■□□□ 1.79
RAB28-201ENST00000288723 RTKN2Q8IZC4 609 aa26.21■■□□□ 1.79
RAB28-201ENST00000288723 ZNF277Q9NRM2 450 aaPredicted RBP26.21■■□□□ 1.79
RAB28-201ENST00000288723 FKBP4Q02790 459 aaKnown RBP eCLIP26.2■■□□□ 1.78
RAB28-201ENST00000288723 NMRK2Q9NPI5 230 aa26.2■■□□□ 1.78
RAB28-201ENST00000288723 DDX60Q8IY21 1712 aaKnown RBP26.2■■□□□ 1.78
RAB28-201ENST00000288723 NEXNQ0ZGT2 675 aa26.19■■□□□ 1.78
RAB28-201ENST00000288723 DDX46Q7L014 1031 aaKnown RBP26.19■■□□□ 1.78
RAB28-201ENST00000288723 PCCAP05165 728 aaPredicted RBP26.18■■□□□ 1.78
RAB28-201ENST00000288723 KIF3CO14782 793 aa26.16■■□□□ 1.78
RAB28-201ENST00000288723 SF3B3Q15393 1217 aaKnown RBP26.16■■□□□ 1.78
RAB28-201ENST00000288723 DNAAF4Q8WXU2 420 aa26.16■■□□□ 1.78
RAB28-201ENST00000288723 SNED1Q8TER0 1413 aa26.16■■□□□ 1.78
RAB28-201ENST00000288723 NEURL1BA8MQ27 555 aa26.16■■□□□ 1.78
RAB28-201ENST00000288723 F6X3S4 739 aa26.16■■□□□ 1.78
RAB28-201ENST00000288723 ZC3H4Q9UPT8 1303 aaKnown RBP26.15■■□□□ 1.78
RAB28-201ENST00000288723 C1QTNF8P60827 252 aa26.15■■□□□ 1.78
RAB28-201ENST00000288723 GRAPQ13588 217 aa26.15■■□□□ 1.78
RAB28-201ENST00000288723 CC2D2BQ6DHV5 1058 aa26.15■■□□□ 1.78
RAB28-201ENST00000288723 GRAPLQ8TC17 118 aaPredicted RBP26.15■■□□□ 1.78
RAB28-201ENST00000288723 ATP6V0A2Q9Y487 856 aa26.15■■□□□ 1.78
RAB28-201ENST00000288723 TAF1P21675 1872 aa26.15■■□□□ 1.78
RAB28-201ENST00000288723 KDM2BQ8NHM5 1336 aa26.14■■□□□ 1.78
RAB28-201ENST00000288723 TIAM2Q8IVF5 1701 aa26.14■■□□□ 1.78
RAB28-201ENST00000288723 BBOX1O75936 387 aa26.14■■□□□ 1.78
RAB28-201ENST00000288723 RRAGCQ9HB90 399 aa26.14■■□□□ 1.77
RAB28-201ENST00000288723 GLTPD2A6NH11 291 aa26.13■■□□□ 1.77
RAB28-201ENST00000288723 CELF1Q92879 486 aaKnown RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms