RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 TNMDQ9H2S6 317 aa11.91□□□□□ -0.5
HMGCR-201ENST00000287936 SYT1P21579 422 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 UBE3BQ7Z3V4 1068 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 ZNF396Q96N95 335 aaPredicted RBP11.9□□□□□ -0.5
HMGCR-201ENST00000287936 METTL22Q9BUU2 404 aaPredicted RBP11.9□□□□□ -0.5
HMGCR-201ENST00000287936 PRDM11Q9NQV5 511 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 MAP3K11Q16584 847 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 CPLX2Q6PUV4 134 aaKnown RBP11.9□□□□□ -0.5
HMGCR-201ENST00000287936 PI4K2BQ8TCG2 481 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 MAP7D2Q96T17 732 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 CFAP45Q9UL16 551 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 NPHP3Q7Z494 1330 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 BECN2A8MW95 431 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 MTX1Q13505 466 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 DDX54Q8TDD1 881 aaKnown RBP11.9□□□□□ -0.5
HMGCR-201ENST00000287936 SLC52A2Q9HAB3 445 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 TMEM63CQ9P1W3 806 aa11.9□□□□□ -0.5
HMGCR-201ENST00000287936 KIF6Q6ZMV9 814 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 GPT2Q8TD30 523 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 CEP126Q9P2H0 1117 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 CPLX1O14810 134 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 TRDNQ13061 729 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 WASHC4Q2M389 1173 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 RALYLQ86SE5 291 aaKnown RBP11.89□□□□□ -0.51
HMGCR-201ENST00000287936 CADPS2Q86UW7 1296 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 DLG5Q8TDM6 1919 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.89□□□□□ -0.51
HMGCR-201ENST00000287936 NFATC2IPQ8NCF5 419 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 TTC39AQ5SRH9 613 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 NEK1Q96PY6 1258 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 CTNNA3Q9UI47 895 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 ZKSCAN5Q9Y2L8 839 aa11.89□□□□□ -0.51
HMGCR-201ENST00000287936 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
HMGCR-201ENST00000287936 RRP9O43818 475 aaKnown RBP11.88□□□□□ -0.51
HMGCR-201ENST00000287936 DHX16O60231 1041 aaKnown RBP11.88□□□□□ -0.51
HMGCR-201ENST00000287936 MTERF4Q7Z6M4 381 aaKnown RBP11.88□□□□□ -0.51
HMGCR-201ENST00000287936 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
HMGCR-201ENST00000287936 NPHP4O75161 1426 aaPredicted RBP11.88□□□□□ -0.51
HMGCR-201ENST00000287936 HMGN5P82970 282 aaKnown RBP11.88□□□□□ -0.51
HMGCR-201ENST00000287936 CCDC57Q2TAC2 916 aa11.88□□□□□ -0.51
HMGCR-201ENST00000287936 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
HMGCR-201ENST00000287936 CEMIPQ8WUJ3 1361 aa11.88□□□□□ -0.51
HMGCR-201ENST00000287936 DDX19AQ9NUU7 478 aaKnown RBP11.88□□□□□ -0.51
HMGCR-201ENST00000287936 GCKRQ14397 625 aa11.87□□□□□ -0.51
HMGCR-201ENST00000287936 NECAB1Q8N987 351 aa11.87□□□□□ -0.51
HMGCR-201ENST00000287936 NOL7Q9UMY1 257 aaKnown RBP11.87□□□□□ -0.51
HMGCR-201ENST00000287936 AKAP2Q9Y2D5 859 aa11.87□□□□□ -0.51
HMGCR-201ENST00000287936 SALL3Q9BXA9 1300 aa11.87□□□□□ -0.51
HMGCR-201ENST00000287936 ATP5J2-PTCD1G3V325 749 aa11.87□□□□□ -0.51
HMGCR-201ENST00000287936 PTCD1O75127 700 aaKnown RBP11.87□□□□□ -0.51
HMGCR-201ENST00000287936 USP25Q9UHP3 1055 aa11.87□□□□□ -0.51
HMGCR-201ENST00000287936 SLC27A2O14975 620 aa11.86□□□□□ -0.51
HMGCR-201ENST00000287936 OFD1O75665 1012 aa11.86□□□□□ -0.51
HMGCR-201ENST00000287936 IFIT1P09914 478 aaKnown RBP11.86□□□□□ -0.51
HMGCR-201ENST00000287936 ZSWIM6Q9HCJ5 1215 aa11.86□□□□□ -0.51
HMGCR-201ENST00000287936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.519e-9■□□□□ 9.6
HMGCR-201ENST00000287936 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
HMGCR-201ENST00000287936 KINO60870 393 aaKnown RBP11.86□□□□□ -0.51
HMGCR-201ENST00000287936 MCMDC2Q4G0Z9 681 aa11.86□□□□□ -0.51
HMGCR-201ENST00000287936 CPA1P15085 419 aa11.86□□□□□ -0.51
HMGCR-201ENST00000287936 DNM1Q05193 864 aaKnown RBP11.86□□□□□ -0.51
HMGCR-201ENST00000287936 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.86□□□□□ -0.514e-7■□□□□ 10.8
HMGCR-201ENST00000287936 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
HMGCR-201ENST00000287936 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
HMGCR-201ENST00000287936 USP42Q9H9J4 1324 aaKnown RBP11.85□□□□□ -0.51
HMGCR-201ENST00000287936 FOSBP53539 338 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 TRIM5Q9C035 493 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 ZDHHC9Q9Y397 364 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 HCLS1P14317 486 aaPredicted RBP11.85□□□□□ -0.51
HMGCR-201ENST00000287936 RPS6KB1P23443 525 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 IL15P40933 162 aaPredicted RBP11.85□□□□□ -0.51
HMGCR-201ENST00000287936 CHRNA2Q15822 529 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 ZSCAN25Q6NSZ9 544 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 EAF2Q96CJ1 260 aaPredicted RBP11.85□□□□□ -0.51
HMGCR-201ENST00000287936 FAM227BQ96M60 508 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 NAT10Q9H0A0 1025 aaKnown RBP11.85□□□□□ -0.51
HMGCR-201ENST00000287936 ZSCAN16Q9H4T2 348 aaPredicted RBP11.85□□□□□ -0.51
HMGCR-201ENST00000287936 FAM13BQ9NYF5 915 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 ADCY5O95622 1261 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 PHKG2P15735 406 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 PTH1RQ03431 593 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 TNNI3KQ59H18 835 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 RASEFQ8IZ41 740 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 PLBD2Q8NHP8 589 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 FPGT-TNNI3KV9GXZ4 949 aa11.85□□□□□ -0.51
HMGCR-201ENST00000287936 TFCP2Q12800 502 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 LMBR1LQ6UX01 489 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 SYNE3Q6ZMZ3 975 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 ADCY9O60503 1353 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 UQCRHLA0A096LP55 91 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 UQCRHP07919 91 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 ATP5JP18859 108 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
HMGCR-201ENST00000287936 GOLIM4O00461 696 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 GADD45BO75293 160 aaPredicted RBP11.84□□□□□ -0.51
HMGCR-201ENST00000287936 APPP05067 770 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 TRIM29Q14134 588 aa11.84□□□□□ -0.51
HMGCR-201ENST00000287936 IMMTQ16891 758 aaKnown RBP11.84□□□□□ -0.51
HMGCR-201ENST00000287936 DDX11Q96FC9 970 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms