RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 SHPRHQ149N8 1683 aa10.94□□□□□ -0.66
CCDC144B-201ENST00000285176 SETDB2Q96T68 719 aa10.94□□□□□ -0.66
CCDC144B-201ENST00000285176 JCADQ9P266 1359 aa10.94□□□□□ -0.66
CCDC144B-201ENST00000285176 HEG1Q9ULI3 1381 aa10.94□□□□□ -0.66
CCDC144B-201ENST00000285176 CNTROBQ8N137 903 aa10.94□□□□□ -0.66
CCDC144B-201ENST00000285176 PEAK1Q9H792 1746 aa10.94□□□□□ -0.66
CCDC144B-201ENST00000285176 NRKQ7Z2Y5 1582 aa10.94□□□□□ -0.66
CCDC144B-201ENST00000285176 LRRC24Q50LG9 513 aa10.94□□□□□ -0.66
CCDC144B-201ENST00000285176 TCEANC2Q96MN5 208 aa10.94□□□□□ -0.66
CCDC144B-201ENST00000285176 DCCP43146 1447 aa10.94□□□□□ -0.66
CCDC144B-201ENST00000285176 KRT27Q7Z3Y8 459 aa10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 TLR7Q9NYK1 1049 aaKnown RBP10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 ZNF652Q9Y2D9 606 aa10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 PALLDQ8WX93 1383 aa10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 ALDH1L1O75891 902 aa10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 HSP90B1P14625 803 aaKnown RBP10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 NEK4P51957 841 aa10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 ANKIB1Q9P2G1 1089 aa10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 KDM6AO15550 1401 aaPredicted RBP10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 SMARCC1Q92922 1105 aaPredicted RBP10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 GBP4Q96PP9 640 aa10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 DBNDD2Q9BQY9 259 aa10.93□□□□□ -0.66
CCDC144B-201ENST00000285176 COL5A2P05997 1499 aaPredicted RBP10.92□□□□□ -0.66
CCDC144B-201ENST00000285176 ANKRD18BA2A2Z9 1011 aa10.92□□□□□ -0.66
CCDC144B-201ENST00000285176 HOXB7P09629 217 aa10.92□□□□□ -0.66
CCDC144B-201ENST00000285176 TMX4Q9H1E5 349 aaPredicted RBP10.92□□□□□ -0.66
CCDC144B-201ENST00000285176 ITGA6P23229 1130 aa10.92□□□□□ -0.66
CCDC144B-201ENST00000285176 IGHMBP2P38935 993 aaKnown RBP10.92□□□□□ -0.66
CCDC144B-201ENST00000285176 CDCA7Q9BWT1 371 aaPredicted RBP10.92□□□□□ -0.66
CCDC144B-201ENST00000285176 KNDC1Q76NI1 1749 aa10.92□□□□□ -0.66
CCDC144B-201ENST00000285176 SEC31BQ9NQW1 1179 aa10.92□□□□□ -0.66
CCDC144B-201ENST00000285176 MON2Q7Z3U7 1717 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 REC8O95072 547 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 ITPK1Q13572 414 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 CCDC158Q5M9N0 1113 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 TTC22Q5TAA0 569 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 ADGRB2O60241 1585 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 IFIT1P09914 478 aaKnown RBP10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 TCIRG1Q13488 830 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 TRAPPC3LQ5T215 181 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 ZNF622Q969S3 477 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 BABAM1Q9NWV8 329 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 ADCY9O60503 1353 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 PDIA6Q15084 440 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 ERC1Q8IUD2 1116 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 GREM2Q9H772 168 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 CEMIPQ8WUJ3 1361 aa10.91□□□□□ -0.66
CCDC144B-201ENST00000285176 RAD21O60216 631 aa10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 SLFNL1Q499Z3 407 aa10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 DNTTIP2Q5QJE6 756 aaKnown RBP10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 UTP14AQ9BVJ6 771 aaKnown RBP10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 SPATA31A5Q5VU36 1347 aa10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 SPATA31A7Q8IWB4 1347 aa10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 EP400Q96L91 3159 aa10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 RXRBP28702 533 aa10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 GSPT1P15170 499 aaKnown RBP10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 STK3Q13188 491 aa10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 RRP12Q5JTH9 1297 aaKnown RBP10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 EAF2Q96CJ1 260 aaPredicted RBP10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 ECHDC1Q9NTX5 307 aa10.9□□□□□ -0.66
CCDC144B-201ENST00000285176 CPDO75976 1380 aa10.9□□□□□ -0.67
CCDC144B-201ENST00000285176 PI16Q6UXB8 463 aa10.9□□□□□ -0.67
CCDC144B-201ENST00000285176 HAND2P61296 217 aa10.89□□□□□ -0.67
CCDC144B-201ENST00000285176 SLC4A9Q96Q91 983 aa10.89□□□□□ -0.67
CCDC144B-201ENST00000285176 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.89□□□□□ -0.67
CCDC144B-201ENST00000285176 CYP19A1P11511 503 aaPredicted RBP10.89□□□□□ -0.67
CCDC144B-201ENST00000285176 NSFL1CQ9UNZ2 370 aaKnown RBP10.89□□□□□ -0.67
CCDC144B-201ENST00000285176 MED1Q15648 1581 aaPredicted RBP10.89□□□□□ -0.67
CCDC144B-201ENST00000285176 C6orf229H3BNL8 230 aa10.89□□□□□ -0.67
CCDC144B-201ENST00000285176 CPA1P15085 419 aa10.89□□□□□ -0.67
CCDC144B-201ENST00000285176 NCBP3Q53F19 620 aaKnown RBP10.89□□□□□ -0.67
CCDC144B-201ENST00000285176 CCDC129Q6ZRS4 1044 aa10.89□□□□□ -0.67
CCDC144B-201ENST00000285176 SH3TC1Q8TE82 1336 aa10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 CHGBP05060 677 aa10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 PRPF40BQ6NWY9 871 aaKnown RBP10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 RAB11FIP4Q86YS3 637 aa10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 GLRX3O76003 335 aaKnown RBP10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 RAI14Q9P0K7 980 aa10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 LRP2BPQ9P2M1 347 aa10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 CCDC191Q8NCU4 936 aa10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 AKAP12Q02952 1782 aa10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 A0A1B0GUL7 405 aa10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 F8W031 263 aaPredicted RBP10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 ST18O60284 1047 aa10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 BMP2KLQ5H9B9 411 aa10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 NLRP3Q96P20 1036 aa10.88□□□□□ -0.67
CCDC144B-201ENST00000285176 LTN1O94822 1766 aa10.87□□□□□ -0.67
CCDC144B-201ENST00000285176 MAP3K15Q6ZN16 1313 aa10.87□□□□□ -0.67
CCDC144B-201ENST00000285176 NCOA3Q9Y6Q9 1424 aa10.87□□□□□ -0.67
CCDC144B-201ENST00000285176 ATP2B3Q16720 1220 aa10.87□□□□□ -0.67
CCDC144B-201ENST00000285176 SUSD4Q5VX71 490 aa10.87□□□□□ -0.67
CCDC144B-201ENST00000285176 GIGYF2Q6Y7W6 1299 aaKnown RBP10.87□□□□□ -0.67
CCDC144B-201ENST00000285176 RPGRQ92834 1020 aaKnown RBP10.87□□□□□ -0.67
CCDC144B-201ENST00000285176 LRRC2Q9BYS8 371 aa10.87□□□□□ -0.67
CCDC144B-201ENST00000285176 RIMBP2O15034 1052 aa10.87□□□□□ -0.67
CCDC144B-201ENST00000285176 RAB11FIP3O75154 756 aa10.87□□□□□ -0.67
CCDC144B-201ENST00000285176 EN1Q05925 392 aaPredicted RBP10.87□□□□□ -0.67
CCDC144B-201ENST00000285176 VPS72Q15906 364 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms