RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 RILPL2Q969X0 211 aa12.12□□□□□ -0.47
PPP4R1-201ENST00000285124 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
PPP4R1-201ENST00000285124 IRS4O14654 1257 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-201ENST00000285124 FAM161AQ3B820 660 aa12.11□□□□□ -0.47
PPP4R1-201ENST00000285124 TFCP2L1Q9NZI6 479 aa12.11□□□□□ -0.47
PPP4R1-201ENST00000285124 UBN2Q6ZU65 1347 aa12.11□□□□□ -0.47
PPP4R1-201ENST00000285124 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-201ENST00000285124 TXNRD1Q16881 649 aa12.11□□□□□ -0.47
PPP4R1-201ENST00000285124 PLEKHM2Q8IWE5 1019 aa12.11□□□□□ -0.47
PPP4R1-201ENST00000285124 BACH2Q9BYV9 841 aa12.11□□□□□ -0.47
PPP4R1-201ENST00000285124 PUS3Q9BZE2 481 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-201ENST00000285124 SIPA1L3O60292 1781 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-201ENST00000285124 H7C1W4 665 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 CAMTA2O94983 1202 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 MFAP1P55081 439 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 EN1Q05925 392 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 TRAPPC3LQ5T215 181 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 PROM2Q8N271 834 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 NEUROD6Q96NK8 337 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 ISCA1Q9BUE6 129 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 NWD2Q9ULI1 1742 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 DOT1LQ8TEK3 1739 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 CCDC57Q2TAC2 916 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 LRRC24Q50LG9 513 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 AACSQ86V21 672 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 HELBQ8NG08 1087 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 HDAC5Q9UQL6 1122 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 ITGB4P16144 1822 aa12.1□□□□□ -0.47
PPP4R1-201ENST00000285124 C8orf34Q49A92 452 aa12.09□□□□□ -0.47
PPP4R1-201ENST00000285124 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
PPP4R1-201ENST00000285124 NDUFB9Q9Y6M9 179 aa12.09□□□□□ -0.47
PPP4R1-201ENST00000285124 COL15A1P39059 1388 aa12.09□□□□□ -0.47
PPP4R1-201ENST00000285124 FOXO4P98177 505 aa12.09□□□□□ -0.47
PPP4R1-201ENST00000285124 POLA2Q14181 598 aa12.09□□□□□ -0.47
PPP4R1-201ENST00000285124 SNAP23O00161 211 aa12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 IFIT2P09913 472 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 CASP7P55210 303 aa12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 MSL1Q68DK7 614 aa12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 CLASRPQ8N2M8 674 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 ZBTB38Q8NAP3 1195 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 GREM2Q9H772 168 aa12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 TIMM10P62072 90 aa12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 PTPN12Q05209 780 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 TFCP2Q12800 502 aa12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 HSP90AB3PQ58FF7 597 aa12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 KIF1BPQ96EK5 621 aa12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 UTP14AQ9BVJ6 771 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-201ENST00000285124 SASH1O94885 1247 aa12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 SETDB2Q96T68 719 aa12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 SEC31BQ9NQW1 1179 aa12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 TLR7Q9NYK1 1049 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 PDE1AP54750 535 aa12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 IFIT5Q13325 482 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 ILDR1Q86SU0 546 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 NBPF5PQ86XG9 351 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 UTRNP46939 3433 aa12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 PCCAP05165 728 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 GSPT1P15170 499 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 EZH2Q15910 746 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 ERFEQ4G0M1 354 aa12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
PPP4R1-201ENST00000285124 ERVV-1B6SEH8 477 aa12.06□□□□□ -0.48
PPP4R1-201ENST00000285124 MX1P20591 662 aa12.06□□□□□ -0.48
PPP4R1-201ENST00000285124 ITGA6P23229 1130 aa12.06□□□□□ -0.48
PPP4R1-201ENST00000285124 ZNF34Q8IZ26 560 aa12.06□□□□□ -0.48
PPP4R1-201ENST00000285124 EAF2Q96CJ1 260 aaPredicted RBP12.06□□□□□ -0.48
PPP4R1-201ENST00000285124 CNNM1Q9NRU3 951 aa12.06□□□□□ -0.48
PPP4R1-201ENST00000285124 LDHAL6AQ6ZMR3 332 aa12.06□□□□□ -0.48
PPP4R1-201ENST00000285124 BOLA2Q9H3K6 86 aa12.06□□□□□ -0.48
PPP4R1-201ENST00000285124 BCL2L12Q9HB09 334 aa12.06□□□□□ -0.48
PPP4R1-201ENST00000285124 SH3TC1Q8TE82 1336 aa12.05□□□□□ -0.48
PPP4R1-201ENST00000285124 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-201ENST00000285124 UTYO14607 1347 aa12.05□□□□□ -0.48
PPP4R1-201ENST00000285124 SDSP20132 328 aa12.05□□□□□ -0.48
PPP4R1-201ENST00000285124 TTLL11Q8NHH1 800 aa12.05□□□□□ -0.48
PPP4R1-201ENST00000285124 HSP90AB4PQ58FF6 505 aa12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 EDC3Q96F86 508 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 RAB11FIP3O75154 756 aa12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 TAF5LO75529 589 aa12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 SLC4A3P48751 1232 aa12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 ZNF827Q17R98 1081 aa12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 NARFQ9UHQ1 456 aa12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 WWC3Q9ULE0 1092 aa12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 RFX5P48382 616 aaPredicted RBP12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 CTSWP56202 376 aa12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 TRIM28Q13263 835 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 SF3B2Q13435 895 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 MTX1Q13505 466 aa12.04□□□□□ -0.48
PPP4R1-201ENST00000285124 PXDNLA1KZ92 1463 aa12.03□□□□□ -0.48
PPP4R1-201ENST00000285124 GORABQ5T7V8 394 aa12.03□□□□□ -0.48
PPP4R1-201ENST00000285124 TTC22Q5TAA0 569 aa12.03□□□□□ -0.48
PPP4R1-201ENST00000285124 PDE8AO60658 829 aa12.03□□□□□ -0.48
PPP4R1-201ENST00000285124 METTL24Q5JXM2 366 aa12.03□□□□□ -0.48
PPP4R1-201ENST00000285124 DNAJC2Q99543 621 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-201ENST00000285124 MPHOSPH8Q99549 860 aa12.03□□□□□ -0.48
PPP4R1-201ENST00000285124 DBNDD2Q9BQY9 259 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms