RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 TNNI2P48788 182 aa17.07■□□□□ 0.32
TRAPPC8-201ENST00000283351 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
TRAPPC8-201ENST00000283351 SMARCC2Q8TAQ2 1214 aa17.07■□□□□ 0.32
TRAPPC8-201ENST00000283351 TDRD12Q587J7 1177 aaKnown RBP17.07■□□□□ 0.32
TRAPPC8-201ENST00000283351 CCDC40Q4G0X9 1142 aa17.07■□□□□ 0.32
TRAPPC8-201ENST00000283351 APBA3O96018 575 aa17.07■□□□□ 0.32
TRAPPC8-201ENST00000283351 SMTNL1A8MU46 457 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 ARHGAP29Q52LW3 1261 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 PLCD4Q9BRC7 762 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 SYNCQ9H7C4 482 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 HOMER2Q9NSB8 354 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 SSH1Q8WYL5 1049 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 PANK2Q9BZ23 570 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 SLC4A4Q9Y6R1 1079 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 PHACTR2O75167 634 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 FGFR1OPO95684 399 aaKnown RBP17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 HMGN5P82970 282 aaKnown RBP17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 FAM98CQ17RN3 349 aaKnown RBP17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 EP400NLQ6ZTU2 488 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 IARSP41252 1262 aaKnown RBP17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 EIF6P56537 245 aaKnown RBP17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 ATP2B3Q16720 1220 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 DPH6Q7L8W6 267 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 WDR7Q9Y4E6 1490 aa17.06■□□□□ 0.32
TRAPPC8-201ENST00000283351 HOOK3Q86VS8 718 aa17.05■□□□□ 0.32
TRAPPC8-201ENST00000283351 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
TRAPPC8-201ENST00000283351 PLB1Q6P1J6 1458 aa17.05■□□□□ 0.32
TRAPPC8-201ENST00000283351 FAM212AQ96EL1 285 aa17.05■□□□□ 0.32
TRAPPC8-201ENST00000283351 GRIPAP1Q4V328 841 aa17.05■□□□□ 0.32
TRAPPC8-201ENST00000283351 UBA7P41226 1012 aa17.05■□□□□ 0.32
TRAPPC8-201ENST00000283351 MRPS9P82933 396 aaKnown RBP17.05■□□□□ 0.32
TRAPPC8-201ENST00000283351 SLC26A6Q9BXS9 759 aa17.05■□□□□ 0.32
TRAPPC8-201ENST00000283351 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
TRAPPC8-201ENST00000283351 NOS1P29475 1434 aa17.05■□□□□ 0.32
TRAPPC8-201ENST00000283351 HELBQ8NG08 1087 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC8-201ENST00000283351 CCDC113Q9H0I3 377 aa17.04■□□□□ 0.32
TRAPPC8-201ENST00000283351 SSX2IPQ9Y2D8 614 aa17.04■□□□□ 0.32
TRAPPC8-201ENST00000283351 FANCAO15360 1455 aa17.04■□□□□ 0.32
TRAPPC8-201ENST00000283351 ARAP1Q96P48 1450 aa17.04■□□□□ 0.32
TRAPPC8-201ENST00000283351 CNBD1Q8NA66 436 aa17.04■□□□□ 0.32
TRAPPC8-201ENST00000283351 TRAF1Q13077 416 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 HEATR3Q7Z4Q2 680 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 RBM17Q96I25 401 aaKnown RBP17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 CHPF2Q9P2E5 772 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 CCDC178Q5BJE1 867 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 ZBTB21Q9ULJ3 1066 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 STX6O43752 255 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 MTIF2P46199 727 aaKnown RBP17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 PICK1Q9NRD5 415 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 CALM1P0DP23 149 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 CALM2P0DP24 149 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 CALM3P0DP25 149 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 AMPD3Q01432 767 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 IQCEQ6IPM2 695 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 ECHDC1Q9NTX5 307 aa17.03■□□□□ 0.32
TRAPPC8-201ENST00000283351 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRAPPC8-201ENST00000283351 ERMNQ8TAM6 284 aa17.02■□□□□ 0.32
TRAPPC8-201ENST00000283351 LARGE2Q8N3Y3 721 aa17.02■□□□□ 0.32
TRAPPC8-201ENST00000283351 METAP2P50579 478 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRAPPC8-201ENST00000283351 NFATC2IPQ8NCF5 419 aa17.02■□□□□ 0.32
TRAPPC8-201ENST00000283351 USP21Q9UK80 565 aa17.02■□□□□ 0.31
TRAPPC8-201ENST00000283351 KAT6BQ8WYB5 2073 aa17.02■□□□□ 0.31
TRAPPC8-201ENST00000283351 IFIT1BQ5T764 474 aaKnown RBP17.01■□□□□ 0.31
TRAPPC8-201ENST00000283351 CNNM3Q8NE01 707 aa17.01■□□□□ 0.31
TRAPPC8-201ENST00000283351 GPHNQ9NQX3 736 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC8-201ENST00000283351 MRE11P49959 708 aa17.01■□□□□ 0.31
TRAPPC8-201ENST00000283351 IVNS1ABPQ9Y6Y0 642 aa17.01■□□□□ 0.31
TRAPPC8-201ENST00000283351 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
TRAPPC8-201ENST00000283351 EVI5LQ96CN4 794 aa17.01■□□□□ 0.31
TRAPPC8-201ENST00000283351 WTAPQ15007 396 aa17.01■□□□□ 0.31
TRAPPC8-201ENST00000283351 PPP4R3BQ5MIZ7 849 aa17.01■□□□□ 0.31
TRAPPC8-201ENST00000283351 NCOA7Q8NI08 942 aa17.01■□□□□ 0.31
TRAPPC8-201ENST00000283351 EFCAB5A4FU69 1503 aa17■□□□□ 0.31
TRAPPC8-201ENST00000283351 BCS1LQ9Y276 419 aa17■□□□□ 0.31
TRAPPC8-201ENST00000283351 BACH1O14867 736 aa17■□□□□ 0.31
TRAPPC8-201ENST00000283351 LMAN1P49257 510 aa17■□□□□ 0.31
TRAPPC8-201ENST00000283351 CPLX3Q8WVH0 158 aa17■□□□□ 0.31
TRAPPC8-201ENST00000283351 FERMT1Q9BQL6 677 aa17■□□□□ 0.31
TRAPPC8-201ENST00000283351 ZMYND15Q9H091 742 aa17■□□□□ 0.31
TRAPPC8-201ENST00000283351 TMOD4Q9NZQ9 345 aa17■□□□□ 0.31
TRAPPC8-201ENST00000283351 GOPCQ9HD26 462 aa17■□□□□ 0.31
TRAPPC8-201ENST00000283351 PIK3R4Q99570 1358 aa16.99■□□□□ 0.31
TRAPPC8-201ENST00000283351 RAB3GAP1Q15042 981 aa16.99■□□□□ 0.31
TRAPPC8-201ENST00000283351 MCM9Q9NXL9 1143 aa16.99■□□□□ 0.31
TRAPPC8-201ENST00000283351 RGS22Q8NE09 1264 aa16.99■□□□□ 0.31
TRAPPC8-201ENST00000283351 H0YIN7 160 aa16.99■□□□□ 0.31
TRAPPC8-201ENST00000283351 IRS4O14654 1257 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC8-201ENST00000283351 CCDC91Q7Z6B0 441 aa16.99■□□□□ 0.31
TRAPPC8-201ENST00000283351 SPDYE3A6NKU9 549 aa16.98■□□□□ 0.31
TRAPPC8-201ENST00000283351 ARL1P40616 181 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC8-201ENST00000283351 TCIRG1Q13488 830 aa16.98■□□□□ 0.31
TRAPPC8-201ENST00000283351 ALDH1L2Q3SY69 923 aa16.98■□□□□ 0.31
TRAPPC8-201ENST00000283351 AKNAD1Q5T1N1 836 aa16.98■□□□□ 0.31
TRAPPC8-201ENST00000283351 ESR2Q92731 530 aa16.98■□□□□ 0.31
TRAPPC8-201ENST00000283351 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
TRAPPC8-201ENST00000283351 CAMSAP2Q08AD1 1489 aa16.98■□□□□ 0.31
TRAPPC8-201ENST00000283351 UFL1O94874 794 aa16.98■□□□□ 0.31
TRAPPC8-201ENST00000283351 TSHZ3Q63HK5 1081 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms