RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 SPATA31A5Q5VU36 1347 aa13.61□□□□□ -0.23
SCLT1-201ENST00000281142 SPATA31A7Q8IWB4 1347 aa13.61□□□□□ -0.23
SCLT1-201ENST00000281142 LARGE1O95461 756 aa13.6□□□□□ -0.23
SCLT1-201ENST00000281142 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
SCLT1-201ENST00000281142 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
SCLT1-201ENST00000281142 PKD1L3Q7Z443 1732 aa13.6□□□□□ -0.23
SCLT1-201ENST00000281142 KIF20AO95235 890 aa13.6□□□□□ -0.23
SCLT1-201ENST00000281142 SYT1P21579 422 aa13.6□□□□□ -0.23
SCLT1-201ENST00000281142 RIOK3O14730 519 aaKnown RBP13.6□□□□□ -0.23
SCLT1-201ENST00000281142 VPS72Q15906 364 aa13.6□□□□□ -0.23
SCLT1-201ENST00000281142 CCDC9Q9Y3X0 531 aaKnown RBP13.6□□□□□ -0.23
SCLT1-201ENST00000281142 SHANK3Q9BYB0 1731 aa13.6□□□□□ -0.23
SCLT1-201ENST00000281142 ZSCAN22P10073 491 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-201ENST00000281142 AK2P54819 239 aa13.59□□□□□ -0.23
SCLT1-201ENST00000281142 BCL11BQ9C0K0 894 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-201ENST00000281142 LRRFIP2Q9Y608 721 aaKnown RBP13.59□□□□□ -0.23
SCLT1-201ENST00000281142 U2AF2P26368 475 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCLT1-201ENST00000281142 HSPA4P34932 840 aa13.59□□□□□ -0.23
SCLT1-201ENST00000281142 MTHFSDQ2M296 383 aaKnown RBP13.59□□□□□ -0.23
SCLT1-201ENST00000281142 DDX54Q8TDD1 881 aaKnown RBP13.59□□□□□ -0.23
SCLT1-201ENST00000281142 FUCA2Q9BTY2 467 aa13.59□□□□□ -0.23
SCLT1-201ENST00000281142 TSPYL4Q9UJ04 414 aa13.59□□□□□ -0.23
SCLT1-201ENST00000281142 GLI3P10071 1580 aa13.59□□□□□ -0.23
SCLT1-201ENST00000281142 RUFY3Q7L099 469 aa13.58□□□□□ -0.23
SCLT1-201ENST00000281142 TMEM87AQ8NBN3 555 aa13.58□□□□□ -0.23
SCLT1-201ENST00000281142 RAPGEF4Q8WZA2 1011 aa13.58□□□□□ -0.23
SCLT1-201ENST00000281142 CHMP3Q9Y3E7 222 aa13.58□□□□□ -0.23
SCLT1-201ENST00000281142 DISP2A7MBM2 1401 aa13.58□□□□□ -0.24
SCLT1-201ENST00000281142 ATRNO75882 1429 aa13.58□□□□□ -0.24
SCLT1-201ENST00000281142 STX6O43752 255 aa13.58□□□□□ -0.24
SCLT1-201ENST00000281142 CCT4P50991 539 aaKnown RBP13.58□□□□□ -0.24
SCLT1-201ENST00000281142 DNM1Q05193 864 aaKnown RBP13.58□□□□□ -0.24
SCLT1-201ENST00000281142 KIAA1524Q8TCG1 905 aa13.58□□□□□ -0.24
SCLT1-201ENST00000281142 SNX14Q9Y5W7 946 aa13.58□□□□□ -0.24
SCLT1-201ENST00000281142 OVOS2A0A0G2JMS6 1433 aa13.58□□□□□ -0.24
SCLT1-201ENST00000281142 IL2RBP14784 551 aa13.58□□□□□ -0.24
SCLT1-201ENST00000281142 UBE2HP62256 183 aa13.58□□□□□ -0.24
SCLT1-201ENST00000281142 LETM1O95202 739 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-201ENST00000281142 TATP17735 454 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-201ENST00000281142 F13A1P00488 732 aa13.57□□□□□ -0.24
SCLT1-201ENST00000281142 ATP8B2P98198 1209 aa13.56□□□□□ -0.24
SCLT1-201ENST00000281142 PDCL2Q8N4E4 241 aa13.56□□□□□ -0.24
SCLT1-201ENST00000281142 TTC14Q96N46 770 aa13.56□□□□□ -0.24
SCLT1-201ENST00000281142 SPG7Q9UQ90 795 aa13.56□□□□□ -0.24
SCLT1-201ENST00000281142 CCDC83Q8IWF9 413 aa13.56□□□□□ -0.24
SCLT1-201ENST00000281142 TMEM51Q9NW97 253 aa13.56□□□□□ -0.24
SCLT1-201ENST00000281142 THRAP3Q9Y2W1 955 aaKnown RBP13.56□□□□□ -0.24
SCLT1-201ENST00000281142 LRRC37A3O60309 1634 aa13.56□□□□□ -0.24
SCLT1-201ENST00000281142 STAP2Q9UGK3 403 aa13.55□□□□□ -0.24
SCLT1-201ENST00000281142 NAP1L2Q9ULW6 460 aaPredicted RBP13.55□□□□□ -0.24
SCLT1-201ENST00000281142 PTGS1P23219 599 aa13.55□□□□□ -0.24
SCLT1-201ENST00000281142 FLIIQ13045 1269 aa13.55□□□□□ -0.24
SCLT1-201ENST00000281142 GJD4Q96KN9 370 aaPredicted RBP13.55□□□□□ -0.24
SCLT1-201ENST00000281142 QTRT2Q9H974 415 aaKnown RBP13.55□□□□□ -0.24
SCLT1-201ENST00000281142 TRPC5Q9UL62 973 aaPredicted RBP13.55□□□□□ -0.24
SCLT1-201ENST00000281142 FAM98CQ17RN3 349 aaKnown RBP13.55□□□□□ -0.24
SCLT1-201ENST00000281142 FAM173BQ6P4H8 233 aa13.55□□□□□ -0.24
SCLT1-201ENST00000281142 SMC3Q9UQE7 1217 aa13.55□□□□□ -0.24
SCLT1-201ENST00000281142 NAA30Q147X3 362 aaPredicted RBP13.54□□□□□ -0.24
SCLT1-201ENST00000281142 CAMK4Q16566 473 aa13.54□□□□□ -0.24
SCLT1-201ENST00000281142 PLEKHO1Q53GL0 409 aaPredicted RBP13.54□□□□□ -0.24
SCLT1-201ENST00000281142 RGS17Q9UGC6 210 aaPredicted RBP13.54□□□□□ -0.24
SCLT1-201ENST00000281142 THSD7AQ9UPZ6 1657 aa13.54□□□□□ -0.24
SCLT1-201ENST00000281142 LRMPQ12912 555 aa13.54□□□□□ -0.24
SCLT1-201ENST00000281142 COL9A3Q14050 684 aaPredicted RBP13.54□□□□□ -0.24
SCLT1-201ENST00000281142 AMOTQ4VCS5 1084 aa13.54□□□□□ -0.24
SCLT1-201ENST00000281142 CWC27Q6UX04 472 aaKnown RBP13.54□□□□□ -0.24
SCLT1-201ENST00000281142 BARGINQ6ZT62 677 aa13.54□□□□□ -0.24
SCLT1-201ENST00000281142 IL17RAQ96F46 866 aa13.54□□□□□ -0.24
SCLT1-201ENST00000281142 LSG1Q9H089 658 aaKnown RBP13.54□□□□□ -0.24
SCLT1-201ENST00000281142 RAD50Q92878 1312 aa13.54□□□□□ -0.24
SCLT1-201ENST00000281142 GJB2P29033 226 aa13.53□□□□□ -0.24
SCLT1-201ENST00000281142 PLEKHG2Q9H7P9 1386 aa13.53□□□□□ -0.24
SCLT1-201ENST00000281142 VPS37CA5D8V6 355 aaPredicted RBP13.53□□□□□ -0.24
SCLT1-201ENST00000281142 SGSM2O43147 1006 aa13.53□□□□□ -0.24
SCLT1-201ENST00000281142 CASTP20810 708 aaKnown RBP13.53□□□□□ -0.24
SCLT1-201ENST00000281142 ADCK5Q3MIX3 580 aa13.53□□□□□ -0.24
SCLT1-201ENST00000281142 ZNF530Q6P9A1 599 aaPredicted RBP13.53□□□□□ -0.24
SCLT1-201ENST00000281142 LIMCH1Q9UPQ0 1083 aa13.53□□□□□ -0.24
SCLT1-201ENST00000281142 MTMR6Q9Y217 621 aa13.53□□□□□ -0.24
SCLT1-201ENST00000281142 ST3GAL1Q11201 340 aa13.53□□□□□ -0.24
SCLT1-201ENST00000281142 ZNF772Q68DY9 489 aaPredicted RBP13.53□□□□□ -0.24
SCLT1-201ENST00000281142 LUZP1Q86V48 1076 aa13.53□□□□□ -0.24
SCLT1-201ENST00000281142 NECAB1Q8N987 351 aa13.53□□□□□ -0.24
SCLT1-201ENST00000281142 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
SCLT1-201ENST00000281142 PI4K2BQ8TCG2 481 aa13.53□□□□□ -0.24
SCLT1-201ENST00000281142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.53□□□□□ -0.247e-6■■□□□ 12.8
SCLT1-201ENST00000281142 NRBP1Q9UHY1 535 aa13.53□□□□□ -0.24
SCLT1-201ENST00000281142 CYP27B1O15528 508 aa13.52□□□□□ -0.24
SCLT1-201ENST00000281142 FERMT3Q86UX7 667 aa13.52□□□□□ -0.24
SCLT1-201ENST00000281142 STK31Q9BXU1 1019 aa13.52□□□□□ -0.24
SCLT1-201ENST00000281142 USP44Q9H0E7 712 aa13.52□□□□□ -0.24
SCLT1-201ENST00000281142 SURF6O75683 361 aaKnown RBP13.52□□□□□ -0.25
SCLT1-201ENST00000281142 GNAI3P08754 354 aa13.52□□□□□ -0.25
SCLT1-201ENST00000281142 ANKRD7Q92527 254 aa13.52□□□□□ -0.25
SCLT1-201ENST00000281142 LIG1P18858 919 aa13.51□□□□□ -0.25
SCLT1-201ENST00000281142 MAP3K5Q99683 1374 aa13.51□□□□□ -0.25
SCLT1-201ENST00000281142 EP400Q96L91 3159 aa13.51□□□□□ -0.25
SCLT1-201ENST00000281142 PTH1RQ03431 593 aa13.51□□□□□ -0.25
SCLT1-201ENST00000281142 CKAP2LQ8IYA6 745 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms