RNA–Protein interactions for RNA: ENST00000276105.3

SNX12-201, Transcript of sorting nexin 12, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene SNX12, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-201ENST00000276105 FKBP4Q02790 459 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNX12-201ENST00000276105 SUSD4Q5VX71 490 aa13.2□□□□□ -0.3
SNX12-201ENST00000276105 DDX21Q9NR30 783 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNX12-201ENST00000276105 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
SNX12-201ENST00000276105 NTSR2O95665 410 aa13.19□□□□□ -0.3
SNX12-201ENST00000276105 GPTP24298 496 aa13.19□□□□□ -0.3
SNX12-201ENST00000276105 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
SNX12-201ENST00000276105 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
SNX12-201ENST00000276105 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
SNX12-201ENST00000276105 CRAMP1Q96RY5 1269 aa13.19□□□□□ -0.3
SNX12-201ENST00000276105 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
SNX12-201ENST00000276105 RPGRQ92834 1020 aaKnown RBP13.18□□□□□ -0.3
SNX12-201ENST00000276105 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
SNX12-201ENST00000276105 PSMD1Q99460 953 aa13.18□□□□□ -0.3
SNX12-201ENST00000276105 POTECB2RU33 542 aa13.17□□□□□ -0.3
SNX12-201ENST00000276105 PROSER3Q2NL68 480 aa13.17□□□□□ -0.3
SNX12-201ENST00000276105 COPS6Q7L5N1 327 aa13.17□□□□□ -0.3
SNX12-201ENST00000276105 NLRP3Q96P20 1036 aa13.17□□□□□ -0.3
SNX12-201ENST00000276105 UTP14AQ9BVJ6 771 aaKnown RBP13.17□□□□□ -0.3
SNX12-201ENST00000276105 ANKRD36CQ5JPF3 1778 aa13.17□□□□□ -0.3
SNX12-201ENST00000276105 SNED1Q8TER0 1413 aa13.16□□□□□ -0.3
SNX12-201ENST00000276105 IQCA1LA6NCM1 817 aa13.16□□□□□ -0.3
SNX12-201ENST00000276105 TCIRG1Q13488 830 aa13.16□□□□□ -0.3
SNX12-201ENST00000276105 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
SNX12-201ENST00000276105 XAGE3Q8WTP9 111 aa13.16□□□□□ -0.3
SNX12-201ENST00000276105 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
SNX12-201ENST00000276105 CHMP4AQ9BY43 222 aa13.16□□□□□ -0.3
SNX12-201ENST00000276105 DBF4Q9UBU7 674 aaPredicted RBP13.16□□□□□ -0.3
SNX12-201ENST00000276105 LAS1LQ9Y4W2 734 aaKnown RBP13.16□□□□□ -0.3
SNX12-201ENST00000276105 SCN4AP35499 1836 aa13.16□□□□□ -0.3
SNX12-201ENST00000276105 DDNO94850 711 aaPredicted RBP13.15□□□□□ -0.3
SNX12-201ENST00000276105 ANXA1P04083 346 aa13.15□□□□□ -0.3
SNX12-201ENST00000276105 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
SNX12-201ENST00000276105 IARSP41252 1262 aaKnown RBP13.15□□□□□ -0.3
SNX12-201ENST00000276105 GNAI1P63096 354 aa13.15□□□□□ -0.3
SNX12-201ENST00000276105 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
SNX12-201ENST00000276105 SYNE4Q8N205 404 aa13.15□□□□□ -0.3
SNX12-201ENST00000276105 PLBD2Q8NHP8 589 aa13.15□□□□□ -0.3
SNX12-201ENST00000276105 TMX4Q9H1E5 349 aaPredicted RBP13.15□□□□□ -0.3
SNX12-201ENST00000276105 ZNF277Q9NRM2 450 aaPredicted RBP13.15□□□□□ -0.3
SNX12-201ENST00000276105 IFT57Q9NWB7 429 aa13.15□□□□□ -0.3
SNX12-201ENST00000276105 FZD9O00144 591 aa13.14□□□□□ -0.31
SNX12-201ENST00000276105 APAF1O14727 1248 aa13.14□□□□□ -0.31
SNX12-201ENST00000276105 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
SNX12-201ENST00000276105 KRT24Q2M2I5 525 aa13.14□□□□□ -0.31
SNX12-201ENST00000276105 JDP2Q8WYK2 163 aa13.14□□□□□ -0.31
SNX12-201ENST00000276105 VPS33BQ9H267 617 aa13.14□□□□□ -0.31
SNX12-201ENST00000276105 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
SNX12-201ENST00000276105 HYPKQ9NX55 129 aa13.14□□□□□ -0.31
SNX12-201ENST00000276105 CHPF2Q9P2E5 772 aa13.14□□□□□ -0.31
SNX12-201ENST00000276105 PPEF1O14829 653 aaPredicted RBP13.13□□□□□ -0.31
SNX12-201ENST00000276105 DUSP27Q5VZP5 1158 aa13.13□□□□□ -0.31
SNX12-201ENST00000276105 OLFM4Q6UX06 510 aa13.13□□□□□ -0.31
SNX12-201ENST00000276105 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
SNX12-201ENST00000276105 KLRG1Q96E93 195 aa13.13□□□□□ -0.31
SNX12-201ENST00000276105 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
SNX12-201ENST00000276105 BBOX1O75936 387 aa13.12□□□□□ -0.31
SNX12-201ENST00000276105 CHADLQ6NUI6 762 aa13.12□□□□□ -0.31
SNX12-201ENST00000276105 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
SNX12-201ENST00000276105 TRMT112Q9UI30 125 aaKnown RBP13.12□□□□□ -0.31
SNX12-201ENST00000276105 ATP6V0A2Q9Y487 856 aa13.12□□□□□ -0.31
SNX12-201ENST00000276105 TRIM28Q13263 835 aaKnown RBP13.11□□□□□ -0.31
SNX12-201ENST00000276105 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
SNX12-201ENST00000276105 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
SNX12-201ENST00000276105 TMC4Q7Z404 712 aa13.11□□□□□ -0.31
SNX12-201ENST00000276105 LDHDQ86WU2 507 aa13.11□□□□□ -0.31
SNX12-201ENST00000276105 GPC2Q8N158 579 aa13.11□□□□□ -0.31
SNX12-201ENST00000276105 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
SNX12-201ENST00000276105 SUPT20HQ8NEM7 779 aa13.11□□□□□ -0.31
SNX12-201ENST00000276105 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
SNX12-201ENST00000276105 ZNF541Q9H0D2 1346 aa13.11□□□□□ -0.31
SNX12-201ENST00000276105 EIF6P56537 245 aaKnown RBP13.1□□□□□ -0.31
SNX12-201ENST00000276105 CCDC27Q2M243 656 aa13.1□□□□□ -0.31
SNX12-201ENST00000276105 DDX46Q7L014 1031 aaKnown RBP13.1□□□□□ -0.31
SNX12-201ENST00000276105 PNMA8AQ86V59 439 aaPredicted RBP13.1□□□□□ -0.31
SNX12-201ENST00000276105 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
SNX12-201ENST00000276105 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
SNX12-201ENST00000276105 HACL1Q9UJ83 578 aa13.1□□□□□ -0.31
SNX12-201ENST00000276105 LAMB2P55268 1798 aa13.09□□□□□ -0.31
SNX12-201ENST00000276105 HSP90B1P14625 803 aaKnown RBP13.09□□□□□ -0.31
SNX12-201ENST00000276105 LARGE2Q8N3Y3 721 aa13.09□□□□□ -0.31
SNX12-201ENST00000276105 RTFDC1Q9BY42 306 aaPredicted RBP13.09□□□□□ -0.31
SNX12-201ENST00000276105 ABCC4O15439 1325 aa13.09□□□□□ -0.31
SNX12-201ENST00000276105 HCLS1P14317 486 aaPredicted RBP13.08□□□□□ -0.32
SNX12-201ENST00000276105 EPHX2P34913 555 aa13.08□□□□□ -0.32
SNX12-201ENST00000276105 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
SNX12-201ENST00000276105 GRAPQ13588 217 aa13.08□□□□□ -0.32
SNX12-201ENST00000276105 GRAPLQ8TC17 118 aaPredicted RBP13.08□□□□□ -0.32
SNX12-201ENST00000276105 HTRA3P83110 453 aa13.07□□□□□ -0.32
SNX12-201ENST00000276105 SF3B3Q15393 1217 aaKnown RBP13.07□□□□□ -0.32
SNX12-201ENST00000276105 CCDC30Q5VVM6 783 aa13.07□□□□□ -0.32
SNX12-201ENST00000276105 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
SNX12-201ENST00000276105 NIM1KQ8IY84 436 aa13.07□□□□□ -0.32
SNX12-201ENST00000276105 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
SNX12-201ENST00000276105 PPIP5K2O43314 1243 aa13.06□□□□□ -0.32
SNX12-201ENST00000276105 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
SNX12-201ENST00000276105 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
SNX12-201ENST00000276105 FAM161AQ3B820 660 aa13.06□□□□□ -0.32
SNX12-201ENST00000276105 DPP8Q6V1X1 898 aaPredicted RBP13.06□□□□□ -0.32
SNX12-201ENST00000276105 RIC3Q7Z5B4 369 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms